prot_F-serratus_M_contig107.672.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig107.672.1
Unique Nameprot_F-serratus_M_contig107.672.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length69
Homology
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.480e-24
Identity = 46/54 (85.19%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIFQTSPGVIAGTMQLY 54
            M GD+GPQ +FN DAKLEGCQVIGYNVSADGKWCLA+GI+Q SPGVIAGTMQLY
Sbjct:  117 MGGDSGPQKIFNRDAKLEGCQVIGYNVSADGKWCLAVGIYQASPGVIAGTMQLY 170          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A7S2V2C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2C2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.130e-12
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKLE-GCQVIGYNVSADGKWCLAIGIFQTSPGVIAGTMQLY 54
            +EGD+GP  +F+  A L  G Q+I Y VSADGKWCL +GI Q   GVI GTMQLY
Sbjct:  124 IEGDSGPVKVFDRHASLSTGNQIINYKVSADGKWCLLVGISQHETGVIVGTMQLY 178          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A7S1XLU7_9STRA (Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.460e-11
Identity = 35/55 (63.64%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKL-EGCQVIGYNVSADGKWCLAIGIFQTSPGVIAGTMQLY 54
            +EGDA P  +F+  A+L EG QVIGY VSADGKWCL +GI Q + G I GTMQLY
Sbjct:  129 LEGDASPTKVFDRHAQLAEGKQVIGYEVSADGKWCLLVGISQGAGG-IEGTMQLY 182          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A7S3H689_9STRA (Clathrin heavy chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H689_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.260e-8
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKL-EGCQVIGYNVSADGKWCLAIGIFQ-TSPGVIAGTMQLY 54
            +EGD  P  +F+ +  L EG Q+I Y VS DGKWCL  GI    +PGVI G MQLY
Sbjct:  131 IEGDTPPVKIFDRNPALTEGTQIINYQVSGDGKWCLLCGISAGATPGVINGNMQLY 186          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A7S2MBB9_9STRA (Clathrin heavy chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 8.330e-8
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKL-EGCQVIGYNVSADGKWCLAIGIFQ-TSPGVIAGTMQLY 54
            +EGD+ PQ +F+   KL + CQ+I Y VSAD KWCL +GI      G + G MQLY
Sbjct:  136 IEGDSAPQKVFDRHEKLADQCQIINYQVSADTKWCLLVGIKAGAQQGTVDGQMQLY 191          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A168NBT5_ABSGL (Clathrin heavy chain n=4 Tax=Absidia TaxID=4828 RepID=A0A168NBT5_ABSGL)

HSP 1 Score: 55.5 bits (132), Expect = 2.910e-7
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIFQTSPGVIAGTMQLYRKK 57
            +EGD+GPQ +F+  A L   Q+I Y VS D KW + IGI   + G + G MQLY K+
Sbjct:  162 IEGDSGPQKVFDRHANLNDTQIINYRVSQDDKWMVLIGISGHN-GRVVGAMQLYSKE 217          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A316UW81_9BASI (Clathrin heavy chain n=2 Tax=Microstromatales incertae sedis TaxID=162477 RepID=A0A316UW81_9BASI)

HSP 1 Score: 55.1 bits (131), Expect = 3.980e-7
Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIF-QTSPGV--IAGTMQLYRK 56
            +EG++GPQ +F+  A L+G Q+I Y ++ D KWC+ +GI    +P    + G MQLY +
Sbjct:  132 IEGESGPQKIFDRHASLQGSQIINYRITEDEKWCVLVGISANNAPNAFRVKGAMQLYSR 190          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A316YX78_9BASI (Clathrin heavy chain n=2 Tax=Exobasidiales TaxID=5404 RepID=A0A316YX78_9BASI)

HSP 1 Score: 54.7 bits (130), Expect = 5.440e-7
Identity = 26/61 (42.62%), Postives = 34/61 (55.74%), Query Frame = 0
Query:    1 MEGDAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIFQTSPGV-----IAGTMQLYRK 56
            MEGD GPQ +F+    L G Q+I Y VS D KW + +GI   + G      + G MQLY +
Sbjct:  127 MEGDGGPQKVFDRHQSLSGSQIINYRVSPDEKWLVLVGISGNTSGAPNAFKVKGNMQLYSR 187          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A3D8R1X9_9HELO (Clathrin heavy chain n=2 Tax=Leotiomycetes TaxID=147548 RepID=A0A3D8R1X9_9HELO)

HSP 1 Score: 53.5 bits (127), Expect = 1.390e-6
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    5 AGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIFQTSPGVIAGTMQLYRK 56
            A P  +F  +  L+GCQ+I Y VS DGKW + +GI Q   G + G MQLY +
Sbjct:  140 AAPVEVFKRNPNLQGCQIINYRVSDDGKWMVVVGISQQQ-GRVVGAMQLYSR 190          
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Match: A0A0D2LXA5_9CHLO (Clathrin, heavy polypeptide n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LXA5_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 1.870e-6
Identity = 26/54 (48.15%), Postives = 31/54 (57.41%), Query Frame = 0
Query:    4 DAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGI---FQTSPGVIAGTMQLY 54
            DA P  +F+    L G Q+I Y VSADGKWC+ IGI       P +  G MQLY
Sbjct:  207 DAPPVKVFDRTPNLAGAQIISYRVSADGKWCVLIGITPGLPERPALARGVMQLY 260          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig107.672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FWD1_ECTSI2.480e-2485.19Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A7S2V2C2_9STRA5.130e-1260.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1XLU7_9STRA2.460e-1163.64Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3H689_9STRA3.260e-853.57Clathrin heavy chain n=1 Tax=Spumella elongata Tax... [more]
A0A7S2MBB9_9STRA8.330e-850.00Clathrin heavy chain n=1 Tax=Dictyocha speculum Ta... [more]
A0A168NBT5_ABSGL2.910e-747.37Clathrin heavy chain n=4 Tax=Absidia TaxID=4828 Re... [more]
A0A316UW81_9BASI3.980e-740.68Clathrin heavy chain n=2 Tax=Microstromatales ince... [more]
A0A316YX78_9BASI5.440e-742.62Clathrin heavy chain n=2 Tax=Exobasidiales TaxID=5... [more]
A0A3D8R1X9_9HELO1.390e-646.15Clathrin heavy chain n=2 Tax=Leotiomycetes TaxID=1... [more]
A0A0D2LXA5_9CHLO1.870e-648.15Clathrin, heavy polypeptide n=1 Tax=Monoraphidium ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016025Clathrin heavy chain, N-terminalGENE3D2.130.10.110coord: 1..64
e-value: 6.1E-14
score: 53.3
IPR016025Clathrin heavy chain, N-terminalSUPERFAMILY50989Clathrin heavy-chain terminal domaincoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig107contigF-serratus_M_contig107:143015..147964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig107.672.1mRNA_F-serratus_M_contig107.672.1Fucus serratus malemRNAF-serratus_M_contig107 134524..150099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig107.672.1 ID=prot_F-serratus_M_contig107.672.1|Name=mRNA_F-serratus_M_contig107.672.1|organism=Fucus serratus male|type=polypeptide|length=69bp
MEGDAGPQTMFNHDAKLEGCQVIGYNVSADGKWCLAIGIFQTSPGVIAGT
MQLYRKKTSFYGQAVPES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016025Clathrin_H-chain_N