prot_F-serratus_M_contig1064.642.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1064.642.1
Unique Nameprot_F-serratus_M_contig1064.642.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length854
Homology
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.670e-90
Identity = 277/862 (32.13%), Postives = 348/862 (40.37%), Query Frame = 0
Query:   42 DACCVAECGMCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTEDTNSTCSNGLSGFEDTVNLVCCDAACGLCGGTGCGNVVGLTGNDC-CSETIASNGTLCSVAGEAPCIVDLPEVTSNSTCSNGFSGFEDTVNFVCCDVACGLCGGEGCGNVPG-LTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASNETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNV-PGLTGNDCCSATIASNGTLCSVAGEAPCILD--LPEVTS-----------------------------------------NGTCSNGFAGIEDTVNFVCCDVACGLCGGAGCGNV-PGLTGDDCCSGTIATNGTLCSVVGAAPCILELPD-------------------------------VISNETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNV-PGLTGNDCCSATIATNGTLCSVAGEAPCILD--LPEVTT-----------------------------NSTCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGLTGND-CCSETIATNGTLCSVTGEAPCILELPEVTTNSTCSNGLSGFEDTVNYVCCDAACGLCGGAGCGNVPG-LTSDDCCSSQIAVNGTSCSETGEAPCIME------------------------LP----EVTSNST------CSNDLAGFEDTADGACCDVACGLCGGAGCGNVPG-LTGDDCCSGTIAVNGTLCSVTGAAPCIIDPPEVTESVCANGLPGVQDGNICCAEACNGVXXXXXXXXXXXXXGSTDCCSAFILAGGVYCEDGVSAPCIMIYGTFDTASPTTTP 756
            +ACC+AECG CGG  C   GG    L  ++CC   I+    LC  +  APC +  ++         NG       V   CC A CG                   C   I   G +CS+A EAPC ++         CSNGF G +      CC   CG CGG  C  + G L  ++CC S I   G LCS+A EAPC LE       +TCSNG  G +      CC A CG CGG+ C     GL   +CC + I  +G LCS+A EAPC LD   PE TS                                            CSNGF GI+      CC   CG CGG+ C     GL  ++CC   I   G LCS+   APC L+ P                                    + CSNG+ G +      CC A CG CGG+ C     GL   +CC + I   G LCS+A EAPC LD   PE T                                TCSNG+ G +      CC A CG CGG+ C    G  G D CC   I  +G LCS+  EAPC L+         CS+G+ G        CC A CG CGG+GC    G L +D+CC   I  +G  CS T EAPC+++                        LP     ++S  +      CSN + G +  +  ACC   CG CGG  C    G L  D+CC   I  +G LCS+   APC ID      + C       + G   CAE   G+             G+ +CC + I   G  C   + APC+ + GT    SP   P
Sbjct:  254 NACCLAECGGCGGLDCDALGG---GLGAENCCESRIVEHGELCSIALEAPCYIDGEM---------NG-------VGNACCLAECGXXXXXXXXXXXXXXXXXXXCESDIVERGEICSIALEAPCYLE-------DMCSNGFPGIQS--GNACCLAECGGCGGSDCDALGGGLGAENCCESDIVERGELCSIALEAPCYLE-------DTCSNGFPGIQSG--NACCLAECGGCGGSDCDQFGDGLGAENCCESDIVEHGELCSIALEAPCYLDEPTPEPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGFPGIQS--GNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGIPGIQSG--NACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDTCSNGMPGIQS--GNACCLAECGACGGSDCDAFGGGLGADNCCESDIVEHGELCSIALEAPCYLD-------DVCSDGIPGIRS--GNACCLAECGACGGSGCDEFGGGLGADNCCEGNIEEHGELCSITLEAPCVVDGRLVADTVPCPSCLMVCLSEHGLTLPPSLFRISSRYSSLPPDMCSNGIPGIQSGS--ACCLAECGACGGLDCDEFGGGLGADNCCVSDIVEHGELCSIALEAPCYIDGVSCCLTECG------ECGGSGCAEYGGGL-------------GADNCCESNIEEYGELCSIKLEAPCV-VDGTVPAPSPVAMP 1041          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 4.050e-86
Identity = 156/318 (49.06%), Postives = 188/318 (59.12%), Query Frame = 0
Query:  464 STCSNGLLGFEDTVNYVCCDAACGLCGGAGC--GNVPGLTGNDCCSETIATNGTLCSVTGEAPCILELPEVTTNSTCSNGLSGFEDTVNYVCCDAACG-LCGGAGCGNVPGLTSDDCCSSQIAVNGTSCSETGEAPCIMELPEVTSNSTCSNDLAGFEDTADGACCDVACGLCGGAGCGNVPGLTGDDCCSGTIAVNGTLCSVTGAAPCIIDPPEVTESVCANGLPGVQDGNICCAEACNGVXXXXXXXXXXXXXGSTDCCSAFILAGGVYCEDGVSAPCIMIYGTFDTA---SPTTTPRVIIFTE-APTVEGQTEAP 774
            + CSNGL G + T   VCC   C +CGG  C   N   LT  DCC+  I  +GT C V+  APCI+       +S C NG +G  D    VCC   CG  CGG GCG++PG+ +  CCSS I  +G  CS+T  APC++   E  +++TCSN + G ED  +  CCD ACGLCGG GCGNV GLTG DCCS  IAV   LCSVT  APC++DPP+   S C NGL GVQDG++CCAE CNGV             G+ DCCS  ILA GV CE+GV APCIM+ GT+  A   +PT  P     T  AP     TEAP
Sbjct:   28 AVCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLDCCSEEIAVVNDLCSVTNEAPCVMDPPDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPMAAPTFPPAAAPGTTVAPGAVAATEAP 345          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 6.640e-85
Identity = 160/310 (51.61%), Postives = 196/310 (63.23%), Query Frame = 0
Query:  465 TCSNGLLGFEDTVNYVCCDAACGLCGGAGC--GNVPGLTGNDCCSETIATNGTLCSVTGEAPCILELPEVTTNSTCSNGLSGFEDTVNYVCCDAACG-LCGGAGCGNVPGLTSDDCCSSQIAVNGTSCSETGEAPCIMELPEVTSNSTCSNDLAGFEDTADGACCDVACGLCGGAGCGNVPGLTGDDCCSGTIAVNGTLCSVTGAAPCIIDPPEVTESVCANGLPGVQDGNICCAEACNGVXXXXXXXXXXXXXGSTDCCSAFILAGGVYCEDGVSAPCIMIYGTFDTASPTTTPRVIIFTEAPTVEGQT 771
            TC+ G+ G E T   VCC   CG CGG GC   N   LT NDCC+  I+ +G +CS TG APCIL     + +S C NG +G +D    VCC   CG  CGG GCG +PG+ +  CC+S I  +G  C +  EAPC  ++    ++S CSN   G E+     CCD AC +CGG+ CGNV GLTG DCC+GTI  N  LCS  G+APC++DPPEVT S CANGL GV  G++CCAE CNGVXXXXXXXXXXX  G+ DCCSA ILA  + C D  +APC+M+ GTF T +P   P V   T AP   G+T
Sbjct:   24 TCAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPCT-QVAVAVADSVCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGADCCTGTIIANDELCSEKGSAPCVVDPPEVTASTCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVD--TAPCVMVEGTF-TPAPAVVPTVAATTTAPLAPGET 329          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 8.140e-85
Identity = 200/560 (35.71%), Postives = 262/560 (46.79%), Query Frame = 0
Query:   29 CTGGIPGVQAVSSDACCVAECGMCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTEDTNSTCSNGLSGFEDTVNLVCCDAACGLCGGTGCGNVVGLTGNDCCSETIASNGTLCSVAGEAPCIVD------------LPEVTSNSTCSNGFSGFEDTVNFVCCDVACGLCGGEGCGNVPGLTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASNET------------CSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGNDCCSATIASNGTLCSVAGEAPCILDLPEVTSNGTCSNGFAGIEDTVNFVCCDVACGLCGGAGCGNVPGLTGDDCCSGTIATNGTLCSVVGAAPCILELPDVISNE----------TCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGNDCCSATIATNGTLCSVAGEAPCILDLPEVTTN--------------------STCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGLTGNDCCSETIATNGTLCSVTGEAPCILELPEVTT 534
            C GGI G+Q  +SD CC A CG CGG+GC+   G +       CC   +  +   C  +G APC+        T   C  G+ G +   + VCC A+CG C GTGC    G +G  CC   + ++G  CSV GEAPC+                       C  G  G +   + VCC  +CG CGG GC +  G +G  CC   +  +G  CSV GEAPC+   +                   C  G+ G +   + VCC   CG CGG GC    G +G  CC   + ++G  CSV GEAPC + +P+      C  G  GI+   + VCC ++C  CGG+GC    G   D+CC G +  +G  CSV G APCI+  P+  +            TC  G+ G +   + VCC   CG CGG GC +  G   N CC   I T    CSV GEAPCI+  PE +T                      TC  G++G +   + VCC  +CG CGG GC +  G   N CC   I T    CSVTGEAPCI+  PE +T
Sbjct:   46 CDGGIVGIQ--TSDVCCSASCGSCGGTGCSGRDGGSGA-----CCGGGVRASGRYCSVTGEAPCM--------TVPMCDGGIVGIQ--ASDVCCSASCGSCAGTGCSGRDGGSGA-CCGGGVQASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTVEVPMCDGGIVGIQ--TSDVCCSASCGSCGGTGCSSRDGGSGA-CCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPMCDGGIVGIQ--TSDVCCSTSCGSCGGTGCSGRDGGSGA-CCGGGVRASGRYCSVTGEAPC-MTVPK------CDGGIVGIQ--ASDVCCSLSCESCGGSGCSGRDGGE-DECCGGGVRASGRDCSVTGEAPCIVTSPEPSTPAPTPAPTRAAGTCDGGIVGVQ--ASDVCCALSCGSCGGDGCSDRDGGEDN-CCGVEIRTANLDCSVTGEAPCIVTSPEPSTXXXXXXXXXXXXXTPAPSRAAGTCEGGIVGVQ--ASNVCCALSCGSCGGDGCSDRDGGEDN-CCGVEIRTANLDCSVTGEAPCIVTSPEPST 565          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 1.350e-77
Identity = 251/845 (29.70%), Postives = 318/845 (37.63%), Query Frame = 0
Query:   29 CTGGIPGVQAVSSDACCVAECGMCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTEDTNSTCSNGLSGFEDTVNLVCCDAACGLCGGTGCGNVVGLTGND-CCSETIASNGTLCSVAGEAPCIVD----LPEVTSNST---------------------------------CSNGFSGFEDTVNFVCCDVACGLCGGEGCGNV-PGLTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASN-------------------------------------ETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGND-CCSATIASNGTLCSVAGEAPCILD----------LPEVT---------------------SNGTCSNGFAGIEDTVNFVCCDVACGLCGGAGCGNV--PGLTGDDCCSGTIATNGTLCSVVGAAPCILE----LPDVISNET--------------------------CSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGND-CCSATIATNGTLCSVAGEAPCILDL----PEVTTNST------------------------------------------------------CSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGLTGND-CCSETIATNGTLCSVTGEAPCILELPEVTTNSTCSNGLSGFEDTVNYVCCDAACGLCGGAGCGNVPGLTSDDCCSSQIAVNGTSCSETGEAPCIMELPEVTSNSTCSNDLAGFEDTADGACCDVACGLCGGAGCGNVPGLTGDD-CCSGTIAVNGTLCSVTGAAPCIID 672
            C+ G PG+Q  S +ACC+AECG CGGS C E GG    L  D+CC   I+    LC  +  APC +        + TCSNG+ G +      CC A CG CGG+ C    G  G D CC   I  +G LCS+A  APC +D     P   +  T                                 CSNG  G +  V+  CC   CG CGG  C     GL  D+CC S I   G LCS+  EAPC+++ S  A +                                     +TCSNG+ G +   +  CC A CG CGG+ C    G  G D CC + I  +G  CS+A EAPC +D          +P                        +  TCS G  GIE +   VCC   C +CGG+GC  V  P    + CCS  I + G  CS  G APC+L      P  ++  T                          CSNG+ G +  V+  CC A CG CGG+ C    G  G D CC + I   G LCS+  EAPC++D     P      T                                                      CSNG+ G +      CC A CG CGG+ C    G  G D CC   I   G LCS T  APC+++               G     + V    A                                                +   CSN + G +  +  ACC   CG CGG+GC  + G  G+D CC   I   G LCSVT AAPC++D
Sbjct:  993 CSNGFPGIQ--SGNACCLAECGACGGSDCDEFGG---GLGADNCCVSDIVEHGELCSIALEAPCYI--------DETCSNGIPGIQ--TGNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALAAPCYIDDSSPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGVS--CCLAECGECGGSDCAEYGDGLGADNCCQSNIEEYGELCSIKLEAPCVVDDSAPAPSPVTMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQS--DNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGEPCSIALEAPCYIDDSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXTEPTCSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYGPESCCSSDILSTGASCSETGEAPCVLADVVLTPAPVAEPTXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGVS--CCLADCGECGGSDCDEFGGGLGADNCCESDIEEYGELCSIKLEAPCVVDASAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADVCSNGIPGIQS--GNACCLAECGACGGSDCAEFGGGLGEDYCCQSEIEDFGELCSATMAAPCVVD---------------GSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATDVCSNGIPGIQ--SGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVTMAAPCVVD 1797          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 2.860e-49
Identity = 152/391 (38.87%), Postives = 190/391 (48.59%), Query Frame = 0
Query:  172 VTSNSTCSNGFSGFEDTVNFVCCDVACGLCGGEGCGNV-PGLTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASNETCSNGLSGFEDAVNG-VCCDALCGLCGGAGCGNVPGLTGNDCCSATIASNGTLCSVAGEAPCILD---LPEVTSNGTCSNGFAGIEDTVNF-VCCDVACGLCGGAGCGNVPG-LTGDDCCSGTIATNGTLCSVVGAAPCILE---------------LPDVISNETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPG-LTGNDCCSATIATNGTLCSVAGEAPCILDLPEVTT----------NSTCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVP-GLTGNDCCSETIATNGTLCSVTGEAPCILE 528
            V    TC     G        CC   C  CGG GC +   GLTG DCC+S I   G  C   G APC+LE  + +S    S+G  G +  + G VCC A CG CGG+GCG+  GLT N+CC++TIA+    C   G APC++D    P         +G    +  +    CC   C  CGG+GC +  G LTG DCC+  I+    LCSV GAAPCI++                     + TC   L G        CC A C  CGG+GC +  G LTG DCC++ I+    LCSV G APCI+D     T          + TC   L G     +Y CC A CG CGG        GLTG DCC+  I+    LCSVTG APCI++
Sbjct:   15 VAKGQTCDGILKG------IYCCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKAC---GSAPCLLE--EGSSPTPASSG--GCDGILQGDVCCSAECGTCGGSGCGSRAGLTANECCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCDGVLKGDY------CCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSPTXXXXXXXXSGSFTCDGVLKG-----DY-CCSAGCGECGGXXXXXXXXGLTGADCCTSDISN---LCSVTGAAPCIVD 368          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 9.000e-47
Identity = 129/397 (32.49%), Postives = 179/397 (45.09%), Query Frame = 0
Query:   29 CTGGIPGVQAVSSDACCVAECGMCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTEDTNSTCSNGLSGFEDTVNLVCCDAACGLCGGTGCGNVVGLTGNDCCSETIASNGTLCSVAGEAPCIVDLPEVTSNST-------------CSNGFSGFEDTVNFVCCDVACGLCGGEGCGNVPGLTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASNET------------CSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGND-----CCSATIASNGTLCSVAGEAPCILDLPEVTSNGT------------CSNGFAGIEDTVNFVCCDVACGLCGGAGCGNVPGLTGDDCCSGTIATNGTLCSVVGAAPCIL 383
            C G I G+Q  SSD CC A CG CGGSGC    G +     + CC   +  +   C  +G APC+        T   C   + G + +   VCC A+CG CGG+GC    G +   CC   + ++G  CS+ GEAPC+   P  T +               C     G + +   VCC  +CG CGG GC    G + + CC   +  +G  CS+ GEAPC+   +                   C   + G + +   VCC A CG CGG+GC      TG D     CC   + ++G  CS+ GEAPC+       +               C  G  GI+   + VCC ++CG CGG+GC    G + + CC G +  +G  CSV G APC++
Sbjct:    2 CDGDIVGIQ--SSDVCCSASCGSCGGSGCTGRDGGS-----ESCCGGGVRASGRYCSITGEAPCM--------TVPMCDGDIVGIQSSD--VCCSASCGSCGGSGCTERDGGS-ESCCGGGVRASGRYCSITGEAPCMTG-PAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSS--DVCCSASCGSCGGSGCTERDGGS-ESCCGGGVRASGRYCSITGEAPCMTGPAPTPDXXXXXXXXXTVEVPMCDGDIVGIQSS--DVCCSASCGTCGGSGC------TGRDGGSESCCGGGVRASGRYCSITGEAPCMTGAAPTPAXXXXXXXXXTVEVPKCDGGIVGIQ--ASDVCCSLSCGSCGGSGCTGRDGGS-ESCCGGGVRASGRDCSVTGEAPCVV 365          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.290e-45
Identity = 116/278 (41.73%), Postives = 150/278 (53.96%), Query Frame = 0
Query:  321 TCSNGFAGIEDTVNFVCCDVACGLCGGAGCGNVPGLTG-DDCCSGTIA--TNGTLCSVVGAAPCILE-------------LPDVISNETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGND-CCSATIATNGTLCSVAGEAPCILD----LPEV----TT----NSTCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGLTG-NDCCSETIATNGTLCSVTGEAPCILE--------------LPEVTTNSTCSNGLSGFEDTVNYVCC 554
            TCSNG  G+ D    VCC  ACG CGG GCG + G  G  DCC  TI   + G  C   G APC++                  ++  TCSNG++G++D    +CC  +CG CGG GCG +PG  G+D CC +TI   G +C   GEAPCI++     P V    TT     STCSNG+LG++D     CC A CG CGG GCG+VPG  G + CCS  +   G LCS TG +PC+++               P V +N  CSNGL G+++  N +CC
Sbjct:  291 TCSNGIPGVSD--GDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFC---GEAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGA--ICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVC---GEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQD--GPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSN--CSNGLPGYQN--NDICC 552          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.810e-40
Identity = 81/185 (43.78%), Postives = 108/185 (58.38%), Query Frame = 0
Query:   18 IVSTLASVGAVCTGGIPGVQAVSSDACCVAECGMCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTEDTNSTCSNGLSGFEDTVNLVCCDAACG-LCGGTGCGNVVGLTGNDCCSETIASNGTLCSVAGEAPCIVDLPEVTSNSTCSNGFSGFEDTVNFVCCDVACGLC 201
            +V T+   GAVC+ G+ G+Q+ S DACCV ECG+CGG GC  A    S+LT  DCC+  I+ +  LC  S AAPC++T     + +S C NG +G +D    VCC   CG  CGG GCG++ G+    CCS  I  +G +CS    APC+V   E  +++TCSNG  G ED VN +     C  C
Sbjct:   19 LVGTMTPAGAVCSNGLEGIQSTSLDACCVEECGLCGGVGCTPAN--TSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASN-DSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAAEADNSTTCSNGIVGIEDPVNLIWYVWMCSAC 200          
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Match: A0A6H5L879_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L879_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.700e-38
Identity = 143/429 (33.33%), Postives = 172/429 (40.09%), Query Frame = 0
Query:  245 ASNETCSNGLSGFEDAVNGVCCDALCGLCGGAGCGNVP---GLTGNDCCSATIASNGTLCSVAGEAPCILDLPEVTSNG-TCSN--GFAGIEDTVNFVCCDVACGLCGGAGCGNVP---GLTGDDCCSGTIATNGTLCSVVGAAPCILELPDVISNETCSNG----------------LSGFED------AVNGVCCDALCGLCGGAGCGNVPGLTGNDCCSA-----------------TIATNGTLCSVAGEAPC----ILDLPEVTTNSTCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGLTGNDCCSETIATNGTLCSVTGEAPCILEL--------PEVTTN---------STCSNGLSGFEDTVNYVCCDAACGLC---GGAGCGNVPGLTSDDCCSSQIAVNGTSCSETG--EAPCIM 599
            A+ +TCSNG+ G E    GVCC ALCGLCGGA C       GL   DCC + I   G  CS    APCI+D     S G TCSN  G  GI      VCC   CGLCGG  C       GL   DCC   I   G  CS  GAAPCI+   +   +ET SN                 +  +ED       V+ +  +A   LC          L   D CS                  T  T  T C  + +  C      DL  +    TC+ G++G E     VCC  +CG CGG  C    G     CC  TI +   LC  T  APC+  +        P  TT          STC+  + G E     VCC   C  C       C  VP      CC  +I + G  CS+ G  E PCI+
Sbjct:   47 ATTQTCSNGIEGIESTNGGVCCPALCGLCGGAACTKAAVDAGLDDGDCCFSDIIRFGASCSENQMAPCIIDDASKASAGNTCSNANGVEGISSANGDVCCPSECGLCGGRDCTQAALAAGLDDGDCCVSDITKEGVKCSDSGAAPCIVYDSE---DETGSNQVREASTPVYITLGCGKIGDYEDPFTVSSTVSDLTVEACYELCASES-SLYFALVEGDVCSCGDQETFVQTFLDSYEEQTAGTCNTACPGSPDETCGGAQAFDLYRILP--TCTGGIIGVEAASGDVCCPFSCGECGGDKCVGEGG-----CCEHTIQSREGLCEDTNAAPCVFNVVAPPPTPVPAPTTPMPTRPPGPVSTCTGDIPGLESDDGTVCCMEHCASCRIESADECAGVPA-----CCQEKILLTGLMCSDEGVEEGPCIL 459          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1064.642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG29_9PHAE1.670e-9032.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7R2_9PHAE4.050e-8649.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG71_ECTSI6.640e-8551.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G3U7_ECTSI8.140e-8535.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ68_ECTSI1.350e-7729.70WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWE8_ECTSI2.860e-4938.87Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JTV1_9PHAE9.000e-4732.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZM1_ECTSI1.290e-4541.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LML5_ECTSI1.810e-4043.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L879_9PHAE3.700e-3833.33WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 834..851
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..833
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 852..853
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.742

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1064contigF-serratus_M_contig1064:193931..203599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1064.642.1mRNA_F-serratus_M_contig1064.642.1Fucus serratus malemRNAF-serratus_M_contig1064 192843..205778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1064.642.1 ID=prot_F-serratus_M_contig1064.642.1|Name=mRNA_F-serratus_M_contig1064.642.1|organism=Fucus serratus male|type=polypeptide|length=854bp
MLSGGMNVATVLRISLVIVSTLASVGAVCTGGIPGVQAVSSDACCVAECG
MCGGSGCAEAGGVNSTLTEDDCCSEVILRANVLCVNSGAAPCVLTADLTE
DTNSTCSNGLSGFEDTVNLVCCDAACGLCGGTGCGNVVGLTGNDCCSETI
ASNGTLCSVAGEAPCIVDLPEVTSNSTCSNGFSGFEDTVNFVCCDVACGL
CGGEGCGNVPGLTGDDCCSSTIATTGTLCSVAGEAPCILELSDVASNETC
SNGLSGFEDAVNGVCCDALCGLCGGAGCGNVPGLTGNDCCSATIASNGTL
CSVAGEAPCILDLPEVTSNGTCSNGFAGIEDTVNFVCCDVACGLCGGAGC
GNVPGLTGDDCCSGTIATNGTLCSVVGAAPCILELPDVISNETCSNGLSG
FEDAVNGVCCDALCGLCGGAGCGNVPGLTGNDCCSATIATNGTLCSVAGE
APCILDLPEVTTNSTCSNGLLGFEDTVNYVCCDAACGLCGGAGCGNVPGL
TGNDCCSETIATNGTLCSVTGEAPCILELPEVTTNSTCSNGLSGFEDTVN
YVCCDAACGLCGGAGCGNVPGLTSDDCCSSQIAVNGTSCSETGEAPCIME
LPEVTSNSTCSNDLAGFEDTADGACCDVACGLCGGAGCGNVPGLTGDDCC
SGTIAVNGTLCSVTGAAPCIIDPPEVTESVCANGLPGVQDGNICCAEACN
GVCGGEGCGSVPGTEGSTDCCSAFILAGGVYCEDGVSAPCIMIYGTFDTA
SPTTTPRVIIFTEAPTVEGQTEAPTATPTTSPDVPPPTAPPSEAGTSPIA
VAAPVTDVPSSGPSSMPTSSPTISGATAPSTGNLVTFAAFAAGTFAVFAA
TRH*
back to top