prot_F-serratus_M_contig1057.579.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1057.579.1
Unique Nameprot_F-serratus_M_contig1057.579.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length88
Homology
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BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A2V8SKV7_9BACT (Beta-ketoacyl-ACP reductase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8SKV7_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 6.940e-6
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0 
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGG 87
            +EF+GK A++TGAASGIG A ALEF + GA  VLVD      +A+ E + +  GG
Sbjct:    1 MEFEGKAAMVTGAASGIGRACALEFAQGGADVVLVDVAGEVALAQVENLLKAAGG 55
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BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: UPI000C78C12D (SDR family oxidoreductase n=1 Tax=Pseudoflavonifractor TaxID=1017280 RepID=UPI000C78C12D)

HSP 1 Score: 52.0 bits (123), Expect = 7.290e-6
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            +EF+GKVA++TGA  G+GA  A +F R+GAK VL+ +  SK+    EEIK E G
Sbjct:    1 MEFEGKVAVVTGAGQGLGAGFAKDFARQGAKVVLLGRTLSKVEKVAEEIKAEGG 54
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BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A7V7C634_9FIRM (Glucose 1-dehydrogenase n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A7V7C634_9FIRM)

HSP 1 Score: 52.0 bits (123), Expect = 7.480e-6
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0 
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            ++ QGKVA+ITGA SG+G A AL F R GAK V+  ++E +  A  E+I+QE G
Sbjct:    2 MKLQGKVAIITGATSGMGRATALLFAREGAKVVVTGRNEERAQAVVEQIRQEGG 55
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BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A0L8LN88_9ACTN (Cyclopentanol dehydrogenase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A0L8LN88_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 7.660e-6
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:   30 MSGLEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE 88
            M+G   +GKVALITGA  GIGAA A  F R GA+ V+ D  + +L A  EEI +ETG +
Sbjct:    1 MTGQRLEGKVALITGATGGIGAATAKLFAREGARLVVTDVHQERLTALTEEI-EETGAD 58
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BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A7L7L1H2_9BACT (SDR family oxidoreductase n=1 Tax=Adhaeribacter radiodurans TaxID=2745197 RepID=A0A7L7L1H2_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 7.800e-6
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:   35 FQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            F GKVAL+TGA+SGIG A AL++ R GA+ V+ D  E+K +   EEIKQ  G
Sbjct:    9 FSGKVALVTGASSGIGKATALQYAREGAQVVVSDIQEAKGLEVVEEIKQNGG 60
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V8SKV7_9BACT6.940e-650.91Beta-ketoacyl-ACP reductase (Fragment) n=1 Tax=Aci... [more]
UPI000C78C12D7.290e-651.85SDR family oxidoreductase n=1 Tax=Pseudoflavonifra... [more]
A0A7V7C634_9FIRM7.480e-651.85Glucose 1-dehydrogenase n=1 Tax=Clostridia bacteri... [more]
A0A0L8LN88_9ACTN7.660e-652.54Cyclopentanol dehydrogenase n=2 Tax=Streptomyces T... [more]
A0A7L7L1H2_9BACT7.800e-655.77SDR family oxidoreductase n=1 Tax=Adhaeribacter ra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 38..84
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableGENE3D3.40.50.720coord: 16..88
e-value: 7.7E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR43180FAMILY NOT NAMEDcoord: 24..80
NoneNo IPR availablePANTHERPTHR43180:SF28NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 24..80
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 30..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1057contigF-serratus_M_contig1057:69051..113725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1057.579.1mRNA_F-serratus_M_contig1057.579.1Fucus serratus malemRNAF-serratus_M_contig1057 69051..113727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1057.579.1 ID=prot_F-serratus_M_contig1057.579.1|Name=mRNA_F-serratus_M_contig1057.579.1|organism=Fucus serratus male|type=polypeptide|length=88bp
TPVQLILKGQGAQCHKGRLVWLEKEQEIKMSGLEFQGKVALITGAASGIG
AAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf