prot_F-serratus_M_contig1057.579.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1057.579.1
Unique Nameprot_F-serratus_M_contig1057.579.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length88
Homology
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A328TVC8_9BACL (Short-chain dehydrogenase n=1 Tax=Paenibacillus montanisoli TaxID=2081970 RepID=A0A328TVC8_9BACL)

HSP 1 Score: 52.8 bits (125), Expect = 4.120e-6
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   30 MSGLEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIK 82
            MSG    GKVA+ITGAASGIG   A  F   GAK VLVD +E++L+   E++K
Sbjct:    1 MSGNRLSGKVAVITGAASGIGRGTAERFAEEGAKLVLVDNNEARLLEAAEQLK 53          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: UPI001FEA3C79 (SDR family oxidoreductase n=2 Tax=Paenibacillus montaniterrae TaxID=429341 RepID=UPI001FEA3C79)

HSP 1 Score: 52.8 bits (125), Expect = 4.410e-6
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   22 LEKEQE--IKMSGLEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE 88
            LE EQE  I M+    + KVALITGAASGIG A A++  + GAK VLVD ++ +     E+IKQ  GGE
Sbjct:    4 LEDEQEVGIAMTESSLKNKVALITGAASGIGQATAIQLAKAGAKIVLVDLNDRRAETTEEQIKQ-LGGE 71          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A524FP71_THOAR (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A524FP71_THOAR)

HSP 1 Score: 52.8 bits (125), Expect = 4.690e-6
Identity = 26/59 (44.07%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   26 QEIKMSGLEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQE 84
            +E+K    +F+G++ +ITGA SGIG AA  E+   GA  +L++++E K +A CEEI++E
Sbjct:    7 KELKECTDDFEGRLVVITGATSGIGYAAVKEYASHGANLLLINRNEEKSIALCEEIRKE 65          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A8C5DKB4_9TELE (Retinol dehydrogenase 11-like n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5DKB4_9TELE)

HSP 1 Score: 52.8 bits (125), Expect = 4.880e-6
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            L   GKVA++TGA +GIG   AL+F RRGA+ +L  + ES+  A  +EIK+ETG
Sbjct:   38 LRLTGKVAIVTGANTGIGKQIALDFARRGARVILACRSESRGAAAVDEIKKETG 91          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A5F2F355_9BACI (SDR family oxidoreductase n=2 Tax=unclassified Lysinibacillus TaxID=2636778 RepID=A0A5F2F355_9BACI)

HSP 1 Score: 52.4 bits (124), Expect = 5.420e-6
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE 88
            +  QGKVA+ITGAA+G+GAA A  F + GAK V  D +E KL+   EEIK   GGE
Sbjct:    1 MRLQGKVAIITGAANGMGAAEAKIFAKEGAKVVATDVNEEKLIELAEEIKA-AGGE 55          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: UPI0006462C6B (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Delftia sp. ZNC0008 TaxID=1339242 RepID=UPI0006462C6B)

HSP 1 Score: 49.3 bits (116), Expect = 5.450e-6
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
Query:   28 IKMSGLEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            ++ S  + QGKVALITGA+SGIG  AA  F R GAK VL  + + +L A   EI+Q+ G
Sbjct:    1 MQPSSQQLQGKVALITGASSGIGREAATLFARHGAKLVLTARRQPELQALVAEIEQDGG 59          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A502GG96_9PROT (SDR family oxidoreductase n=1 Tax=Roseomonas nepalensis TaxID=1854500 RepID=A0A502GG96_9PROT)

HSP 1 Score: 52.4 bits (124), Expect = 5.580e-6
Identity = 28/44 (63.64%), Postives = 33/44 (75.00%), Query Frame = 0
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVA 76
            +  QGKVA ITGAASGIGAA AL F R GA+ +LVD+DE  L +
Sbjct:    1 MRLQGKVAAITGAASGIGAATALLFARNGARLLLVDRDEESLAS 44          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A1X9YNZ4_9BACT (Short-chain dehydrogenase n=1 Tax=Pontibacter actiniarum TaxID=323450 RepID=A0A1X9YNZ4_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 5.660e-6
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   34 EFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE 88
            +F GKVAL+TGA+SGIG A AL++ R GAK V+ D  E + +   EEIKQ +GGE
Sbjct:    8 QFTGKVALVTGASSGIGKATALQYAREGAKVVVSDIKEDEGLKVVEEIKQ-SGGE 61          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A0P8C0M6_9RHOB (7-alpha-hydroxysteroid dehydrogenase n=1 Tax=Rhodobacteraceae bacterium HLUCCO18 TaxID=1666917 RepID=A0A0P8C0M6_9RHOB)

HSP 1 Score: 52.4 bits (124), Expect = 5.960e-6
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   33 LEFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETG 86
            L  QGK A+ITGAA+G+G A A  F+ RGA  +  D+DE++L  +C +I+ + G
Sbjct:    3 LSIQGKTAIITGAANGVGLAVARHFIDRGANVMFADRDEARLADECGDIQDDKG 56          
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Match: A0A7C3UTH9_9DELT (SDR family NAD(P)-dependent oxidoreductase (Fragment) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3UTH9_9DELT)

HSP 1 Score: 49.7 bits (117), Expect = 6.220e-6
Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   34 EFQGKVALITGAASGIGAAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE 88
            EF+GKVAL+TGA SGIG A AL F R GAK V+ D D  K   + E +  E GGE
Sbjct:    3 EFKGKVALVTGAGSGIGRAVALAFARMGAKVVVADIDADK-GRETERMIGEAGGE 56          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1057.579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A328TVC8_9BACL4.120e-654.72Short-chain dehydrogenase n=1 Tax=Paenibacillus mo... [more]
UPI001FEA3C794.410e-652.17SDR family oxidoreductase n=2 Tax=Paenibacillus mo... [more]
A0A524FP71_THOAR4.690e-644.07SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A8C5DKB4_9TELE4.880e-651.85Retinol dehydrogenase 11-like n=2 Tax=Gouania will... [more]
A0A5F2F355_9BACI5.420e-655.36SDR family oxidoreductase n=2 Tax=unclassified Lys... [more]
UPI0006462C6B5.450e-650.85SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A502GG96_9PROT5.580e-663.64SDR family oxidoreductase n=1 Tax=Roseomonas nepal... [more]
A0A1X9YNZ4_9BACT5.660e-656.36Short-chain dehydrogenase n=1 Tax=Pontibacter acti... [more]
A0A0P8C0M6_9RHOB5.960e-646.307-alpha-hydroxysteroid dehydrogenase n=1 Tax=Rhodo... [more]
A0A7C3UTH9_9DELT6.220e-656.36SDR family NAD(P)-dependent oxidoreductase (Fragme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 38..84
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableGENE3D3.40.50.720coord: 16..88
e-value: 7.7E-16
score: 59.7
NoneNo IPR availablePANTHERPTHR43180FAMILY NOT NAMEDcoord: 24..80
NoneNo IPR availablePANTHERPTHR43180:SF28NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEINcoord: 24..80
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 30..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1057contigF-serratus_M_contig1057:69051..113725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1057.579.1mRNA_F-serratus_M_contig1057.579.1Fucus serratus malemRNAF-serratus_M_contig1057 69051..113727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1057.579.1 ID=prot_F-serratus_M_contig1057.579.1|Name=mRNA_F-serratus_M_contig1057.579.1|organism=Fucus serratus male|type=polypeptide|length=88bp
TPVQLILKGQGAQCHKGRLVWLEKEQEIKMSGLEFQGKVALITGAASGIG
AAAALEFVRRGAKAVLVDKDESKLVAKCEEIKQETGGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf