prot_F-serratus_M_contig1056.577.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1056.577.1
Unique Nameprot_F-serratus_M_contig1056.577.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length596
Homology
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI)

HSP 1 Score: 638 bits (1646), Expect = 6.530e-223
Identity = 366/543 (67.40%), Postives = 410/543 (75.51%), Query Frame = 0
Query:   64 RLSPSCAVASSNGAFFGYRRAVAISRAPSR-----------ASPMKMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTSSEPSPMANLIQDGXXXXXXXXXXXXXLSKKAKEPRGGAATNKGFG 595
            R S SC  A+   A    R ++ +SR+ SR           +SP+ MMFDTL E+M  + ++F+GQKTITESSV GAL EV+RALLDAD+NL V + LV+ VK K VGMKLV+GVT +QQF+ VMNDELVEIMG+EQAPLA RTDG PTVILLAGLQGTGKTTAAAKLAKYL QQEE PKKVLLVAGDVYRPAAIDQLI+LGKRI+VEVFSMGQGVDPVEITKAGL RA +  FDTVIVDTAGRQVVDD LM ELKDIQVAS ADEVLLVVDAMTGQEAATLA+VFNEKIGITGA+LTK+DGDTRGGAALSVQGVSQKPIKFVG+GEK                                MSE+EA ++A+KMIN EFDFNDFLKQ++MMK MGSLGGVA M+PGMAGK++PQQLNQ EEGV+RAEGLI  MTPEERR P LL+ DPT+  R RRIA+DAGVKLSAVSAFLKEFQ MQSNM+RMGKQMA G P  G   +PSP   L  D                 K  +    AA +KGFG
Sbjct:   51 RSSSSCRAAAIGAAG---RSSLPVSRSSSRRGRRGGCAGGASSPLGMMFDTLAENMAGVANLFTGQKTITESSVEGALNEVKRALLDADLNLMVTNTLVDAVKSKAVGMKLVDGVTAKQQFVNVMNDELVEIMGAEQAPLARRTDGKPTVILLAGLQGTGKTTAAAKLAKYL-QQEEEPKKVLLVAGDVYRPAAIDQLISLGKRIDVEVFSMGQGVDPVEITKAGLERAVEGEFDTVIVDTAGRQVVDDTLMTELKDIQVASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGIGEK--------------------------------MSEEEAAKLAKKMINAEFDFNDFLKQAKMMKGMGSLGGVANMIPGMAGKITPQQLNQAEEGVQRAEGLIKFMTPEERRTPKLLILDPTSQARCRRIARDAGVKLSAVSAFLKEFQAMQSNMSRMGKQMADGDPNAGPGGQPSPFQGLGGDTAPGAAPSMNRQQRRQSKKNKAGRSAAPSKGFG 557          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 1.680e-178
Identity = 292/480 (60.83%), Postives = 363/480 (75.62%), Query Frame = 0
Query:   98 KMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRT-DGNPTVILLAGLQGTGKTTAAAKLAKYLK-------------------------QQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMA-----GGAPG 546
            +MMFD LTE M  I +M  G+K IT +SV  AL EV+RALLDADVNLKV + L+E V+ + VG  L+EGVTP+QQF+K+M DELV++MGS+QAPLA  T +G P VILLAGLQG GKTTAAAKLAK+ +                         Q+E  P KVLLVAGDVYRPAAI+QL  LG+RI  EVF+ G+ VDPV+I + G+  ARD GFD VIVDTAGRQV+D+ LM EL  ++ A   DEVLLVVDAMTGQEAATL   FNE++GITGAILTKLDGD+RGG+ALSVQGVS +PIKFVGVGE++DDLEPFYPDRMASRILGMGD+V+ VEKAQK++SE E  ++++KM++  FDFNDFL+QS++++NMGS+  VAKM+PGMAGKLS QQ++  E+  +RA+  I++M PEER  P LL+ D  A QR RRIAK A V+   V+AF+ +FQ M++ M+RM K+MA     GGAPG
Sbjct:   58 RMMFDQLTEKMAGIGEMLQGKKKITAASVERALGEVKRALLDADVNLKVTNGLIESVRNQAVGKLLIEGVTPDQQFVKIMYDELVKVMGSQQAPLARSTKEGEPVVILLAGLQGAGKTTAAAKLAKFCQERGAGVAPAEEPQPEMKEGEVWTPPQREGPPGKVLLVAGDVYRPAAIEQLQRLGERIGAEVFAPGRDVDPVDIARGGVQYARDGGFDAVIVDTAGRQVIDEKLMDELVKVKGACEPDEVLLVVDAMTGQEAATLTAAFNERVGITGAILTKLDGDSRGGSALSVQGVSGRPIKFVGVGERIDDLEPFYPDRMASRILGMGDIVSFVEKAQKQVSEAEMAQLSQKMMDATFDFNDFLEQSKVVRNMGSMANVAKMIPGMAGKLSQQQMDDAEDRAERADLFISLMLPEERTNPDLLIRDAAALQRQRRIAKAAQVRPQDVAAFISDFQTMRTMMSRMSKRMAPGGDMGGAPG 537          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A7R9U2M9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M9_9STRA)

HSP 1 Score: 505 bits (1301), Expect = 2.390e-170
Identity = 276/473 (58.35%), Postives = 350/473 (74.00%), Query Frame = 0
Query:   83 RAVAISRAPSRASPMKMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASR----TDGN-------PTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGA 544
            R  ++ RA    +P KMMFD ++E+M++   +  G+KT+TE++V  AL +V+RALLDADVNLKVA+ L++ VKE  +G ++VEG TP+Q FIK MNDEL+ +MG+E APLA R     DG        PTV+LLAGLQG GKTTA  KLA+Y K+ E+ P+ VLL A DVYRPAAI QL  LG+++ V+V++ G    PV+I      +A+ EG+DT+IVDTAGRQV+D+ LM EL+ I+ A   DE LLVVDAMTGQEAATL   F+ ++ ITGAILTKLDGDTRGGAALSV  +S +PIKF GVGEK+D LEPFYPDRMASRILGMGDVVTLVEK +KE+SEK+AE M  KM+++ FDF+DFL+Q++M+ NMGS+ GV KMLPGMAG+LS  QL   E+ + RAEGLI  MTP+ER+ P LL+ D +A  RL RIA  +G  L   S F+ EFQ M+S M+ MGK M G A
Sbjct:   53 RLPSLRRAAPLRTPPKMMFDRISEAMSSAGQLLRGKKTLTENNVNAALADVKRALLDADVNLKVANDLIKNVKEDVLGKEVVEGATPDQMFIKCMNDELISLMGAEAAPLADRRKRDADGKVLAAGDRPTVVLLAGLQGAGKTTACGKLARYCKEDEKAPRNVLLAACDVYRPAAIKQLEILGEQVGVDVYTEGTEASPVDIASNAFQKAKQEGYDTLIVDTAGRQVIDEDLMAELRGIKDALEPDETLLVVDAMTGQEAATLTARFDSEVSITGAILTKLDGDTRGGAALSVNAISGRPIKFAGVGEKMDALEPFYPDRMASRILGMGDVVTLVEKLEKEVSEKQAERMVNKMLDQTFDFDDFLQQTKMVSNMGSMAGVLKMLPGMAGQLSNDQLRMAEKRMARAEGLIQCMTPKERKTPDLLIRDRSARARLIRIATASGQSLDEASQFISEFQQMRSMMSSMGKNMMGNA 525          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A7S1U8S0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S0_9STRA)

HSP 1 Score: 498 bits (1281), Expect = 4.410e-168
Identity = 264/459 (57.52%), Postives = 350/459 (76.25%), Query Frame = 0
Query:   97 MKMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRTD-----------GNPTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGA 544
            M MMFD ++ +M++   + +G++++TE++VG AL +V+RALLDADVNLKVA+ L+  VK   +G ++V+GV PE+ FIK MND LV +MG+EQ+PLA R +             PTV+LLAGLQG GKTTA  KLAK  K+ E  P+KVL+ A DVYRPAAI QL  LG+++ V+V++ G   DPVEI K   A+A++ G+DT++VDTAGRQV+DDGLM+EL  I+ A   DE LLVVDAMTGQEAATL   F+E++ I+GAILTKLDGDTRGGAA+S+  VS +PIKF GVGEKL DLEPFYPDRMASRILGMGDVV+LVEK +KE+S+ +AE M  KM+++ FDF+DFLKQ++M+ NMG++ GV KMLPGMAGK+   QL + +  ++RAE LI  MTPEER+EP LL+ D +A +RL RIA+ AG++++    F+ EF+GM++ M+RMGK + G A
Sbjct:   61 MNMMFDRISAAMSSAGTLLTGKQSLTENNVGAALADVKRALLDADVNLKVANDLIASVKADVLGAEVVKGVAPEEYFIKCMNDGLVALMGAEQSPLADRRELDAEGKVVGPGDRPTVVLLAGLQGAGKTTACGKLAKLCKENEAAPRKVLMAACDVYRPAAIKQLQLLGEQVGVDVYTEGADADPVEIAKNAFAKAQEGGYDTLLVDTAGRQVIDDGLMEELSSIKKALTPDETLLVVDAMTGQEAATLTQRFDEQVDISGAILTKLDGDTRGGAAISINAVSGRPIKFAGVGEKLGDLEPFYPDRMASRILGMGDVVSLVEKMEKEVSKDDAEVMMNKMLDQTFDFDDFLKQAKMINNMGNMAGVMKMLPGMAGKIDNNQLREGQRRMRRAEKLIKEMTPEERKEPDLLIRDRSARERLGRIAEAAGLEINDADEFISEFEGMRTTMSRMGKGLMGAA 519          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A6V3B529_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3B529_HETAK)

HSP 1 Score: 491 bits (1264), Expect = 4.410e-165
Identity = 272/456 (59.65%), Postives = 336/456 (73.68%), Query Frame = 0
Query:   97 MKMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLA--SRTDG----NPTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPG 546
            +K  F+ LTE M  + +M +G+  +TE ++  AL +V+RA+LDADVNLKV + L++ VK+K +GM++ +GVTPEQQF+KVM DELV I+G   A LA   R D      PTVILLAGLQG GKTTAA KLA Y K + +  ++ LL A DVYRPAAIDQL TLG RI VEVFS G   DPVEI +A +A A+ +G+DTVIVDTAGRQV+D+ LM ELK+I+ A   DEVLLV+DAMTGQEAATL   F+E + +TGA+LTKLDGD+RGGAALSV GVS KPIKF+GVGE+LD LEPFYPDRMASRILGMGDV++LVEKAQ+++SE EA  M  KM++  FDF+DFLKQS MM  MGS+  V KMLPGMAGK+S  +++Q E+ + RA  LI  M  EER  P LL+ D  A  RLRRI+ DAG        F+ EFQ M++ M+RM KQM  G  G
Sbjct:   62 VKAFFEQLTEGMAGVAEMMTGKSRMTEKNIDAALTDVKRAMLDADVNLKVTNDLIKAVKKKALGMEVTKGVTPEQQFVKVMGDELVRILGGAVAELARGDRVDALGQPEPTVILLAGLQGAGKTTAAGKLALYCKGEAQG-RRPLLCAADVYRPAAIDQLKTLGGRIGVEVFSQGTDADPVEIARAAVAHAKAQGYDTVIVDTAGRQVIDENLMAELKNIKTAVNPDEVLLVLDAMTGQEAATLTARFDEAVALTGAVLTKLDGDSRGGAALSVYGVSGKPIKFIGVGEQLDKLEPFYPDRMASRILGMGDVISLVEKAQEQVSEDEAMAMTMKMMDNTFDFDDFLKQSEMMNKMGSMANVVKMLPGMAGKVSQAKMDQAEDRMDRARALIKAMNAEERGNPDLLIRDREAWTRLRRISADAGYSFDEAREFILEFQQMKTIMSRMSKQMGMGGAG 516          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR)

HSP 1 Score: 481 bits (1237), Expect = 3.240e-162
Identity = 263/456 (57.68%), Postives = 337/456 (73.90%), Query Frame = 0
Query:   99 MMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTSSEPS 554
            M+FD+LTE M        G   ITE +V GA+K+V+RALLDADVNL+V + L++ +KE+ +G ++V GV P Q  IK+M++EL EIMG +QAPLA R+DG PTV+LLAGLQG GKTTAAAKLA Y  + + +   V+L+AGDVYRPAAIDQL TLG  I V+VFSMG   DP +I + G+ + ++   DT+IVDTAGRQV+D  LMKELKD++  S  DE LLVVDAMTGQEAATL   FNE++GITGAILTKLDGDTRGGAALSVQ VS  PIKF+GVGEK++ LEPF P+RMASRILGMGDV+T VE+A+++M E+EAE+M ++M+  +FDFNDFLKQ++M+ +MGSL GV KMLPG+ G +S  ++ Q E  +K A+ LI  MT +ER  P LL S  +A  R+ RI+K AG         +K+F  M+  M+RM KQM  G  G G S +P+
Sbjct:    1 MLFDSLTEKMGETVRKLRGVDKITEKNVAGAMKQVKRALLDADVNLRVVNGLIKQIKERAIGAEVVPGVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDKRS---VMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKVEKLEPFIPERMASRILGMGDVLTFVERAKEQMDEREAEKMTKRMMEAKFDFNDFLKQTKMISSMGSLAGVMKMLPGV-GSISSAKMAQAEAKLKLADSLIKSMTVKERTNPELLYSGGSARSRILRISKGAGRSRDDAEDLVKDFLKMRDMMSRMSKQMVNGQGGPGGSGQPA 452          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR)

HSP 1 Score: 479 bits (1233), Expect = 8.060e-162
Identity = 259/439 (59.00%), Postives = 329/439 (74.94%), Query Frame = 0
Query:  117 GQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTSSEPSP 555
            G   ITE +V GA+K+V+RALLDADVNL+V + L++ +K + VG  +  GV P Q  +K+M++EL +IMGS QAPLA+RTDG PTV+LLAGLQG GKTTAAAKLA Y  ++E +   V+++A DVYRPAAIDQL TLGK IEV+VF MG  V+P EI + GL   +    +T+IVDTAGRQV+D  LMKELKDI+  S ADE LLVVDAMTGQEAATL   FN+++GITGAILTKLDGDTRGGAALSVQ VS  PIKF+GVGEK+  LEPFYP+RMASRILGMGDV+T+VEKAQ  M E EAE+M RKM+  +FDFNDFLKQ++M+  MGSLGG+ KM+PG+ G+++  +L + E  +K A+ +I  MT +ER  P LL + P++  R+ RIA  +G  L+     + +FQ M++ M RM KQM GG  G  T +E +P
Sbjct:    3 GVDKITEKNVTGAMKDVKRALLDADVNLRVVNALLKQIKARAVGADVTPGVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEERS---VMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKVQKLEPFYPERMASRILGMGDVLTIVEKAQDVMDEAEAEKMTRKMMENKFDFNDFLKQTKMLSQMGSLGGLMKMMPGIGGQINESKLKEAEVKLKVADSIIKSMTKQERGNPELLYTAPSSRSRVERIANGSGRSLAQAKNMISDFQKMRTMMQRMSKQMVGGPDG--TPAEGAP 436          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: A0A448Z1S5_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z1S5_9STRA)

HSP 1 Score: 481 bits (1238), Expect = 6.640e-161
Identity = 282/520 (54.23%), Postives = 364/520 (70.00%), Query Frame = 0
Query:   74 SNGAFFGYRRAVAISRAPSRASP-MKMMFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAP------------------LASRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKQ------------QEEN------PK---KVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQ-------MAGGAPG 546
            S+ AF G      + R   R+SP + MMFD L+ +++ +   F G++ ITE S+  AL+ VRRALLDADVN+ VAD L++GVK++++G  ++EGV+ +QQFIK M DELV++MG + A                   LA  + G+P V+LLAGLQG GKTTAA KLA YLK+            +EEN      PK   KVLL A DVYRPAAI QL  LGK ++VEVFSMG   DPV+I +  LA+A+ EGFDT+IVDTAGRQ++DD LM ELK+IQ     DE LLVVDAMTGQEAA+L   F+  +G+TGAILTK+DGD+RGGAA+SV+GVS KPIKFVG GE+  DLEPFYPDRMASRILGMGDV+++VEKAQ+EM++KEA+ M  K+ N EFDF+DFLKQ++M+  MGSLGGVAKM+PGM G +S +QL   E+ +K+ E +IAVMT EER+ P LL+ D  + +RL+RIAK + + +  V  F+ EFQ M++ M+RM K        MAGG  G
Sbjct:   33 SSSAFIGRSTPTLVERRQDRSSPQLSMMFDQLSNAISTVVKDF-GKQRITEESIKPALRSVRRALLDADVNIDVADALIDGVKKRSLGETVIEGVSADQQFIKAMYDELVDMMGGDSAAKSDTSAMGPAALAPPASTLALGSPGDPAVVLLAGLQGAGKTTAAGKLALYLKEREVDYSVNLDEIEEENRTAARLPKRNRKVLLAAADVYRPAAITQLEILGKSVDVEVFSMGTEADPVDIAQKALAKAKAEGFDTLIVDTAGRQIIDDDLMVELKNIQETVKPDETLLVVDAMTGQEAASLTAAFDSAVGLTGAILTKMDGDSRGGAAVSVRGVSGKPIKFVGTGERTPDLEPFYPDRMASRILGMGDVLSIVEKAQEEMTDKEAKLMEEKVKNAEFDFDDFLKQAKMVSKMGSLGGVAKMMPGM-GSVSQEQLIAAEKRLKKNEAMIAVMTEEERKNPDLLIKDSKSRERLQRIAKFSEMDIKDVRQFMSEFQKMRTMMSRMSKANDKMNPAMAGGGDG 550          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: B8BUG8_THAPS (Signal recognition particle 54 kDa subunit n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUG8_THAPS)

HSP 1 Score: 471 bits (1211), Expect = 3.830e-158
Identity = 265/466 (56.87%), Postives = 336/466 (72.10%), Query Frame = 0
Query:  100 MFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSE------QAPLASRTDGN-PTVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTSSEPSPMAN 558
            MFD L+ ++T +   F G++ +TE+S+  ALK VRRALLDADVNL VA  L++GVK +++G ++ +GVT EQQFIK M DEL+++MG E       A LA  +  N P VILLAGLQG GKTTAA KLA  L ++    +KVLLVA DVYRPAAI+QL  LGK+I VEVFSMG   DP +I K  + +A+ EGFDTV+VDTAGRQVVD+ LM+EL+ ++     DE LLVVDAMTGQ AA+L   F+  +GI+GAILTKLDGD+RGGAA+S++GVS KPIKFVGVGEK +DLEPFYPDRMASRILGMGDV++LVEKA  E+S+ +A +M  KM   EFDF+DF+ QSRM+  MGS+ GVAKMLPGM   +   Q+ QVEE +KR+E +I  M  +ER  P LLL+D +A  RL RI K +G+      AF+ EFQ M++ ++RM KQ   G P G    EP+   N
Sbjct:    1 MFDQLSNALTEVAKNFGGKQRMTENSIQPALKSVRRALLDADVNLDVATALIDGVKRRSLGKEVTKGVTAEQQFIKAMYDELLDMMGGEANESNTMATLAHSSVANEPAVILLAGLQGAGKTTAAGKLAFRLPKRN---RKVLLVAADVYRPAAIEQLQILGKQIGVEVFSMGVDADPADIAKEAVEKAKREGFDTVVVDTAGRQVVDEELMEELRRVKKTVEPDETLLVVDAMTGQAAASLTASFDAAVGISGAILTKLDGDSRGGAAVSIRGVSGKPIKFVGVGEKTNDLEPFYPDRMASRILGMGDVISLVEKASMEVSDADAAKMQEKMAKAEFDFDDFMTQSRMVSKMGSMAGVAKMLPGMGNMIDSSQMRQVEERIKRSEAMICSMNKKERANPGLLLTDKSARSRLMRITKGSGLAFEDGLAFMSEFQKMRTMISRMAKQTGMGQPDGEGEMEPAMAGN 463          
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Match: K0R3Q4_THAOC (SRP54 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R3Q4_THAOC)

HSP 1 Score: 471 bits (1211), Expect = 7.770e-157
Identity = 267/503 (53.08%), Postives = 349/503 (69.38%), Query Frame = 0
Query:  100 MFDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRLVEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMG----------------SEQAPLASRTDGNPTVILLAGLQGTGKTTAAAKLAKYLKQQE-----------------------ENPKKVLLVAGDVYRPAAIDQLITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVDDGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILTKLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMGDVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGGVAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPTASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTSSEPSPMANLIQDG 563
            MFD L+ ++T +   F G++ +TE+S+  ALK VRRALLDADVNL+VA  L++GVK +++GM++ +GVT EQQF+K M DEL+++MG                S  A LA +   +P VILLAGLQG GKTTAA KLA YLK++E                       +  +KVLL A DVYRPAAI+QL  LGK I+VEVFSMG   DP  I KA + +A++EGFDTVIVDTAGRQVVD+ LM+EL+ ++ + + DE LLVVDAMTGQ AA+L   F+  +GI+GAILTKLDGD+RGGAA+S++GVS KPIKFVGVGEK  +LEPF+PDRMASRILGMGDVV+LVEKA  E+S+ +A++M  KM+  +FDF+DF++QS+M+ +MGS+ GVAKMLPGM   +   QL QVE  +KR+E +I  MT +ER  P LLL+D TA  R+ RIA  AG++     AF+ EFQ M++ ++RM KQ   GA   G   +P  M   +  G
Sbjct:   48 MFDQLSSALTEVAQNFGGKQRMTENSIQPALKSVRRALLDADVNLEVATALLDGVKRRSLGMEVTKGVTAEQQFVKAMYDELLDMMGGDADSGGAMGGNPSLQSPTATLAYKEGSDPAVILLAGLQGAGKTTAAGKLALYLKEREVDSTALDLMSEEERSQTLASRMPKRNRKVLLAAADVYRPAAIEQLQILGKSIDVEVFSMGTDEDPANIAKAAVEKAKNEGFDTVIVDTAGRQVVDEDLMEELRRVKKSVSPDETLLVVDAMTGQAAASLTASFDSAVGISGAILTKLDGDSRGGAAVSIRGVSGKPIKFVGVGEKTAELEPFFPDRMASRILGMGDVVSLVEKASMEVSDADAKKMQEKMVKAQFDFDDFMQQSKMVSSMGSMAGVAKMLPGMGNMIDNSQLKQVEMRIKRSEAMICSMTKKERANPELLLTDKTARSRVTRIANGAGLRFEDGLAFMSEFQKMRTMISRMSKQAGMGA---GMEPDPEEMMPALAGG 547          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1056.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN22_ECTSI6.530e-22367.40PFfh, plastid Ffh subunit of the signal recognitio... [more]
A0A835YMH5_9STRA1.680e-17860.83SRP54-type protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7R9U2M9_9STRA2.390e-17058.35Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1U8S0_9STRA4.410e-16857.52Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6V3B529_HETAK4.410e-16559.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V3IRY4_9FLOR3.240e-16257.68Signal recognition particle protein n=1 Tax=Gracil... [more]
R7QHF1_CHOCR8.060e-16259.00Signal recognition particle SRP54 homolog ffh n=1 ... [more]
A0A448Z1S5_9STRA6.640e-16154.23SRP54 domain-containing protein n=2 Tax=Pseudo-nit... [more]
B8BUG8_THAPS3.830e-15856.87Signal recognition particle 54 kDa subunit n=1 Tax... [more]
K0R3Q4_THAOC7.770e-15753.08SRP54 domain-containing protein n=1 Tax=Thalassios... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 100..185
e-value: 1.1E-24
score: 98.0
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 105..181
e-value: 2.5E-16
score: 59.6
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 199..349
e-value: 5.4E-10
score: 49.2
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 200..398
e-value: 2.9E-104
score: 362.4
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 200..398
e-value: 6.7E-73
score: 244.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 371..384
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 104..408
e-value: 3.4E-114
score: 382.9
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 429..533
e-value: 1.7E-22
score: 79.9
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 429..552
e-value: 9.3E-33
score: 114.6
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 429..533
NoneNo IPR availableGENE3D3.40.50.300coord: 189..387
e-value: 3.4E-114
score: 382.9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..595
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR004780Signal recognition particle proteinTIGRFAMTIGR00959TIGR00959coord: 101..534
e-value: 2.7E-157
score: 522.0
IPR004780Signal recognition particle proteinPANTHERPTHR11564:SF7SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, CHLOROPLASTICcoord: 100..545
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINScoord: 100..545
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 104..560
score: 31.324
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 141..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1056contigF-serratus_M_contig1056:233055..253320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1056.577.1mRNA_F-serratus_M_contig1056.577.1Fucus serratus malemRNAF-serratus_M_contig1056 233055..253320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1056.577.1 ID=prot_F-serratus_M_contig1056.577.1|Name=mRNA_F-serratus_M_contig1056.577.1|organism=Fucus serratus male|type=polypeptide|length=596bp
RRLERQLLKYTSVLMYMPTRLVAVAVATAYYASVPSSLAFAPSGVAIDGR
RPLVGAHPPAGRSRLSPSCAVASSNGAFFGYRRAVAISRAPSRASPMKMM
FDTLTESMTAITDMFSGQKTITESSVGGALKEVRRALLDADVNLKVADRL
VEGVKEKTVGMKLVEGVTPEQQFIKVMNDELVEIMGSEQAPLASRTDGNP
TVILLAGLQGTGKTTAAAKLAKYLKQQEENPKKVLLVAGDVYRPAAIDQL
ITLGKRIEVEVFSMGQGVDPVEITKAGLARARDEGFDTVIVDTAGRQVVD
DGLMKELKDIQVASAADEVLLVVDAMTGQEAATLATVFNEKIGITGAILT
KLDGDTRGGAALSVQGVSQKPIKFVGVGEKLDDLEPFYPDRMASRILGMG
DVVTLVEKAQKEMSEKEAEEMARKMINKEFDFNDFLKQSRMMKNMGSLGG
VAKMLPGMAGKLSPQQLNQVEEGVKRAEGLIAVMTPEERREPSLLLSDPT
ASQRLRRIAKDAGVKLSAVSAFLKEFQGMQSNMARMGKQMAGGAPGGGTS
SEPSPMANLIQDGGSGGGGMNRRQRRLSKKAKEPRGGAATNKGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR003593AAA+_ATPase
IPR000897SRP54_GTPase_dom
IPR042101SRP54_N_sf
IPR004125Signal_recog_particle_SRP54_M
IPR036891Signal_recog_part_SRP54_M_sf
IPR004780SRP
IPR022941SRP54
IPR027417P-loop_NTPase