prot_F-serratus_M_contig1051.546.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1051.546.1
Unique Nameprot_F-serratus_M_contig1051.546.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length863
Homology
BLAST of mRNA_F-serratus_M_contig1051.546.1 vs. uniprot
Match: D8LBR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR7_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.690e-61
Identity = 191/471 (40.55%), Postives = 225/471 (47.77%), Query Frame = 0
Query:  438 TATPPSERAP---CAE--RQWPKTALA--ARLDFSGRSLWEVSHVVVKQSSLHRPGGKEDRR------------GSGATIVVCHSGGVSVWALTDLDAVCTHLSPALAGVTKEQVRGRFYVAAVASGAEVAETPSAAGTRE---SVQTCIVAIGRHVTDPGLPIIRVWQ--GPLWVAE-GPQGKVAADKKG---------------------VVLTTILKKKFSTFFPPVAARDVLPRLCVCGSSSAVESEDEGCGSR---DGANPG--------EITCVMALGVKAVRIDCTLWKSRPGDVRAKGLPTGAVDVQAVFTSLAAVPDNPFLVWASLPSSNVLLLWDVQELRLLFTLPLTASNICVPVISLPSSLTARGYGPAEGPESYRRAWPSALRTPAPGGVPRRRDPTFLCVLAT---------EGVLRGETACSLLEHGCDLYGV-CVEFDDDAGAQGAG-ISAVRLE 840
            T  P SE AP   CA+    WP TA+A  A LDFSG+    VS VVV  +     G                   + A+IVVCHSGGVSVW LTD +A+CTHLSP LA   KE V  RF  AAV  G     TPSA  TR        CI+A+GR  TDPG PI RVWQ   P  V    PQG   AD++                       VLTT +KKKFS FFPP     V P LCVCG S A     +G G     D   PG        EIT VMALG KA+R+     +S      AK LP    D  AV+TSLA VP NP+LV AS P  N +L+W+V +LR LFTLP+T  ++CVP       L A   G A       R   +A           +  P  LC+LAT         EG +      S +  GC L+GV C   D  AG    G +SA+RLE
Sbjct:  305 TVPPSSENAPPSSCADGRHSWP-TAIARVATLDFSGKPSLVVSSVVVTSAGSRGRGSXXXXXXXXXXXXGSVTTAATASIVVCHSGGVSVWDLTDSEAICTHLSPELASAAKELVPWRFMAAAVVGGDLAGSTPSA--TRAPGGGKDACIMAVGRQGTDPGSPIFRVWQQGSPSPVPPLTPQGAGRADRRRSSGGTVGGSAGRAKEAPALQPAVLTTTVKKKFSKFFPPAVPSHVTPCLCVCGYSGANGERGDGAGGAAVGDEGGPGAETSEFAREITAVMALGGKALRLVFGAGRSGSETFVAKQLPARLAD-DAVYTSLAPVPSNPYLVCASAPLVNSVLVWNVLDLRPLFTLPITTVSVCVP-------LAAAAAGNAAVARGVPRVAEAAXXXXXXXXXXAKPAPRMLCLLATGSRHAGGSSEGGVSSTRETSKV--GCGLFGVYCGGGDGGAGKHSCGRVSAIRLE 762          
BLAST of mRNA_F-serratus_M_contig1051.546.1 vs. uniprot
Match: A0A6H5KBZ1_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ1_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 5.340e-59
Identity = 190/509 (37.33%), Postives = 231/509 (45.38%), Query Frame = 0
Query:  402 PTVVTPLTHERDEQNDKQGNPCES--------SSISPDQNPPCLTATPPS-ERAP---CAE--RQWPKT-ALAARLDFSGRSLWEVSHVVVKQSSLHRPGGKEDRR----------GSGATIVVCHSGGVSVWALTDLDAVCTHLSPALAGVTKEQVRGRFYVAAVASGAEVAETPSAAGTRESVQTC-IVAIGRHVTDPGLPIIRVWQ------------------------GPLWVAEGPQGKVAADKKGVVLTTILKKKFSTFFPPVAARDVLPRLCVCGSSSAVESEDEGCGS-----RDGANPG------EITCVMALGVKAVRIDCTLWKSRPGDVRAKGLPTGAVDVQAVFTSLAAVPDNPFLVWASLPSSNVLLLWDVQELRLLFTLPLTASNICVPVISLPSSLTARGYGPAEGPESYRRAWPSALRTPAPGGVPRRRDPTFLCVLATEGVLRGETACSLLEHG-------CDLYGV-CVEFDDDAGAQGAG-ISAVRLE 840
            P VV  LT + DE+ND                S  S D    C    PPS E AP   CA+    WP   A  A LDFSG+    VS VVV  +     G                 + A+IVVCHSGGVSVW LTD +A+CTHLSP LA   KE V  +F  AAV  G     TPSA       +   I+A+GR  TDPG PI RVWQ                        G        + K A   +  VLTT +KKKFS FFPP     ++P LCVCG S A     +G G       DG   G      EIT VMALG KA+R+     +S      AK LPT   D  AV+TSLA VP NP+LV AS P  N +L+W+V +LR LFTLP+T  ++CVP+ S      A   G     E+                   +  P  LC+LAT     G ++ S +          C L+GV C   D  AG    G +SA+RLE
Sbjct:  473 PWVVPLLTADSDERNDDSXXXXXXXXXXXSGVSDASEDVAATCGPTVPPSSEDAPPSSCADGRHSWPAAIARVATLDFSGKPSLAVSSVVVTSAGSRASGXXXXXXXXXXXXXVATAATASIVVCHSGGVSVWDLTDSEAICTHLSPELASAAKELVPWKFMAAAVVGGDLAGSTPSATRAPGGGKGAYIMAVGRQGTDPGSPIFRVWQQGSPSPVPPLTPQDARRADRRRSSGXXXXXXXXRAKGAPSLQPAVLTTTVKKKFSKFFPPAVPSHIMPCLCVCGYSVANGERGDGAGGMAAGDEDGPGAGTAELAGEITAVMALGGKALRLVFGAGRSGSETFVAKQLPTKLADDAAVYTSLAPVPSNPYLVCASAPLVNAVLVWNVLDLRPLFTLPITTVSVCVPLASAAVGNAAVARGVPMVAEAAXXXXXXXXXXXXXXXXXXKPAPRMLCLLATGSRHAGGSSESGVSSTREKSKVVCGLFGVYCGGGDGGAGKHSCGRVSAIRLE 981          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBR7_ECTSI2.690e-6140.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBZ1_9PHAE5.340e-5937.33RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.140coord: 142..200
e-value: 4.0E-6
score: 28.5
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 149..168
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 145..174
score: 8.084
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 146..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1051contigF-serratus_M_contig1051:187946..191467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1051.546.1mRNA_F-serratus_M_contig1051.546.1Fucus serratus malemRNAF-serratus_M_contig1051 187824..191829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1051.546.1 ID=prot_F-serratus_M_contig1051.546.1|Name=mRNA_F-serratus_M_contig1051.546.1|organism=Fucus serratus male|type=polypeptide|length=863bp
MSRAYRPRLSKDKAVAQRVGEELERERLQDFSVARQMAALGVGSPHRSTS
HTSSQMANADVLLSSGGSQRRSSTRRSSTPSTSSREGRLQRSAGRSVTTA
TGTTHDSIIGTDRATQLTNVQTCSPKRKRGRSSRVLDAGSADAARDNGWA
CLSCSFLNTELTQKCRMCGTKNFHPRAQRAEAPEAQPDQEPPMLGEGSRE
LGSRRQGAKRVGANSTECDASINGASSREASANSACTARETKAATSGGGE
DIRSSNRQRKLGTALDPAAAERAVEGGTSVGRLKNQERQTLEAEVCTRVN
YKHHEKDPGLLASPSPKKRVNERKRFPGLVDVFSSPVTAELPSNSTLGDC
VSEASLPRGGGRLTGLDCANVSSSPLPDGEEERSTLASRGETTIEVNGRC
LPTVVTPLTHERDEQNDKQGNPCESSSISPDQNPPCLTATPPSERAPCAE
RQWPKTALAARLDFSGRSLWEVSHVVVKQSSLHRPGGKEDRRGSGATIVV
CHSGGVSVWALTDLDAVCTHLSPALAGVTKEQVRGRFYVAAVASGAEVAE
TPSAAGTRESVQTCIVAIGRHVTDPGLPIIRVWQGPLWVAEGPQGKVAAD
KKGVVLTTILKKKFSTFFPPVAARDVLPRLCVCGSSSAVESEDEGCGSRD
GANPGEITCVMALGVKAVRIDCTLWKSRPGDVRAKGLPTGAVDVQAVFTS
LAAVPDNPFLVWASLPSSNVLLLWDVQELRLLFTLPLTASNICVPVISLP
SSLTARGYGPAEGPESYRRAWPSALRTPAPGGVPRRRDPTFLCVLATEGV
LRGETACSLLEHGCDLYGVCVEFDDDAGAQGAGISAVRLEGGGGASSTPS
RDRSLGRSWSAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf