prot_F-serratus_M_contig1051.540.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1051.540.1
Unique Nameprot_F-serratus_M_contig1051.540.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length289
Homology
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: UPI0015612C80 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI0015612C80)

HSP 1 Score: 260 bits (665), Expect = 9.790e-83
Identity = 141/282 (50.00%), Postives = 186/282 (65.96%), Query Frame = 0
Query:    7 FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 288
            +ETL VS+P   V+HV ++RP KRNAMN  FW E   CF+RI+ D+D R V VSGAG  F+AG+DL D +  D +  E  D ARRA+  +   +  Q++FS IERC +PV+ A+HGACVGG VDL  ACDIRFCS           +GLAADVGTLQR+P+++G+ SL  ELAYT R   + EA   GLVS+V      +  +++  L  A+EI+ +SPVAV GTK NL+Y RDHS+ +GLEY ATW+ + LQ ED+ K+  A+L +KS    P    +SKL
Sbjct:   41 YETLRVSQPRESVIHVELHRPEKRNAMNQAFWREMVVCFDRIAEDSDCRAVVVSGAGKIFTAGIDLMDMAG-DVLQPEGDDAARRAWNLQRKIREYQDTFSVIERCSKPVLVAVHGACVGGGVDLISACDIRFCSQDAWFQIKEVDIGLAADVGTLQRLPKVIGSRSLVSELAYTARKLMSDEAKSCGLVSRVF---PDKDSMMEGVLDMASEISSKSPVAVQGTKINLLYSRDHSVREGLEYIATWNMSMLQTEDIMKSAQAALEKKS----PKEVLYSKL 314          
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A8B6EPU1_MYTGA (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6EPU1_MYTGA)

HSP 1 Score: 260 bits (664), Expect = 1.080e-82
Identity = 141/287 (49.13%), Postives = 189/287 (65.85%), Query Frame = 0
Query:    2 TAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 288
            T+YD FETL VS P   V HV +NRP + NAMN  FW E RECF++++ D + RV+ VSGAG  F+AGLDL D  +   +    KDVAR  F+ R   +  QESF+SIE+CP+PVIAA+HG CVGG VDL  ACDIR+C+           VGL ADVGTLQR+P+I+GN+SL REL YT R F + EA  +G VS++      +  ++ A++  A+ IA +SPVAV GTK +++Y RDHS+ +GL + A W+ A LQ+ED+ K+  A +++K        P FSKL
Sbjct:   34 TSYD-FETLKVSSPREDVAHVELNRPDRLNAMNIAFWRECRECFQKLAIDKNYRVIIVSGAGRLFTAGLDLMDMGD---VMPTGKDVARNCFKMRPKIEEYQESFTSIEKCPKPVIAAVHGGCVGGGVDLTSACDIRYCTQDAWFQIKEIDVGLTADVGTLQRLPKIIGNDSLARELCYTARKFHSDEAKEIGFVSRIF---PDKAAMINAAIELASLIASKSPVAVQGTKVSMVYSRDHSVPEGLAHIALWNQAMLQSEDVMKSAEAMMQKK-------EPKFSKL 306          
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: A0A401NMA4_SCYTO (Uncharacterized protein n=3 Tax=Galeoidea TaxID=119195 RepID=A0A401NMA4_SCYTO)

HSP 1 Score: 258 bits (660), Expect = 2.290e-82
Identity = 139/283 (49.12%), Postives = 183/283 (64.66%), Query Frame = 0
Query:    6 DFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 288
            DFETL VS+    VLHV +NRP KRNAMN   W E  ECF+RI++D D RVV VSGAG  F+AG+DL D +  + +  +  D AR+A+  R      QESF+ IE+C +PVIAA+HGAC+GG +DL  ACDIR CS           +G+AADVGTLQR+P+++GN SL  EL YT R   A EA   GLVS++      ++ ++  +   A+EIA +SPV V G K NLIY RDHS++DGL Y ATW+ + LQ +DL K+  A++ +KS    P    +SKL
Sbjct:   12 DFETLRVSQARDSVLHVELNRPKKRNAMNKTLWREMVECFQRIAQDTDQRVVVVSGAGKMFTAGIDLLDMAG-EVLQPQGDDTARKAWHMRNTILQYQESFNVIEKCSKPVIAAVHGACIGGGIDLITACDIRLCSRDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVSELVYTARMMMADEALSCGLVSRLF---EDKEAMLDGAFEMASEIASKSPVGVQGAKMNLIYSRDHSVKDGLNYIATWNMSMLQTDDLVKSAQAAMEKKSPKDVP----YSKL 286          
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: UPI0018F54D84 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F54D84)

HSP 1 Score: 259 bits (662), Expect = 2.380e-82
Identity = 140/283 (49.47%), Postives = 183/283 (64.66%), Query Frame = 0
Query:    6 DFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 288
            DFETL VS+    VLHV +NRP KRNAMN   W E  ECF+RI++D D RVV VSGAG  F+AG+DL D +  + +  +  D AR+A+  R      QESF+ IE+C +PVIAA+HGAC+GG VDL  ACDIR CS           +G+AADVGTLQR+P+++GN SL  EL YT R   A EA   GLVS++      ++ ++  +   A+EIA +SPV V G K NLIY RDHS++DGL Y ATW+ + LQ +DL K+  A++ +KS    P    +SKL
Sbjct:   35 DFETLRVSQARDSVLHVELNRPEKRNAMNKTLWREMVECFQRIAQDTDQRVVVVSGAGKMFTAGIDLLDMAG-EVLQPQGDDTARKAWHMRNTILQYQESFNVIEKCSKPVIAAVHGACIGGGVDLITACDIRLCSRDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVSELVYTARMMMADEAQSCGLVSRLF---EDKEAMLDGAFEMASEIASKSPVGVQGAKMNLIYSRDHSVKDGLNYIATWNMSMLQTDDLVKSAQAAMEKKS----PKDVSYSKL 309          
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Match: UPI00140410C0 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI00140410C0)

HSP 1 Score: 259 bits (662), Expect = 2.380e-82
Identity = 136/282 (48.23%), Postives = 188/282 (66.67%), Query Frame = 0
Query:    7 FETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISRDADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAKTMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSXXXXXXXXXXXVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVLGPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYAATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL 288
            FE+L  +R    VLHV +NRP KRNAMN   W E  ECF+R+++D+D RVV +SGAG  F+AG+DL D +  D +  E  DVAR+A++ R      QESFS+IE+CP+PVIAA+H AC+GG +DL  ACDIR CS           +G+AADVGTLQR+P+++GN SL  EL YT R   A EA   GLVS+V      ++ +++ +   A+EIA +SP+AV G+K N+IY RDHS+++GL+Y ATW+ + LQ ED+ K+  A + +K+    P    +SKL
Sbjct:   36 FESLRATRVGDSVLHVELNRPEKRNAMNKILWREMVECFDRVAQDSDFRVVVISGAGKMFTAGIDLMDMAG-DMLQSEETDVARKAWKLRNTILRFQESFSAIEKCPKPVIAAIHSACIGGGIDLITACDIRLCSQDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVNELVYTARKMMADEAMSCGLVSRVF---QGKEALLEGAFHLASEIASKSPLAVQGSKLNMIYSRDHSVKEGLDYIATWNMSMLQTEDIVKSAQAVMEKKT----PKDITYSKL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0015612C809.790e-8350.00delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
A0A8B6EPU1_MYTGA1.080e-8249.13Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase n=3 Ta... [more]
A0A401NMA4_SCYTO2.290e-8249.12Uncharacterized protein n=3 Tax=Galeoidea TaxID=11... [more]
UPI0018F54D842.380e-8249.47delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]
UPI00140410C02.380e-8248.23delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitoc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001753Enoyl-CoA hydratase/isomerasePFAMPF00378ECH_1coord: 18..267
e-value: 4.8E-40
score: 137.4
NoneNo IPR availableGENE3D3.90.226.10coord: 2..222
e-value: 4.5E-64
score: 217.7
NoneNo IPR availablePANTHERPTHR43149:SF1DELTA(3,5)-DELTA(2,4)-DIENOYL-COA ISOMERASE, MITOCHONDRIALcoord: 6..276
NoneNo IPR availablePANTHERPTHR43149FAMILY NOT NAMEDcoord: 6..276
IPR014748Enoyl-CoA hydratase, C-terminalGENE3D1.10.12.10coord: 223..276
e-value: 6.4E-20
score: 72.9
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 4..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1051contigF-serratus_M_contig1051:50328..61775 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1051.540.1mRNA_F-serratus_M_contig1051.540.1Fucus serratus malemRNAF-serratus_M_contig1051 50292..62276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1051.540.1 ID=prot_F-serratus_M_contig1051.540.1|Name=mRNA_F-serratus_M_contig1051.540.1|organism=Fucus serratus male|type=polypeptide|length=289bp
MTAYDDFETLLVSRPESWVLHVMINRPAKRNAMNARFWIEFRECFERISR
DADVRVVTVSGAGDHFSAGLDLEDTSNFDTIARETKDVARRAFRFRTLAK
TMQESFSSIERCPQPVIAALHGACVGGAVDLACACDIRFCSQDVKFCIAE
VKVGLAADVGTLQRMPRIVGNESLCRELAYTGRTFGAAEAARMGLVSQVL
GPGSRRQEVVQASLVTAAEIARQSPVAVFGTKRNLIYGRDHSIEDGLEYA
ATWSGAALQAEDLRKAMGASLRRKSSSKAPSHPGFSKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Enoyl-CoA_hydra/iso
IPR014748Enoyl-CoA_hydra_C
IPR029045ClpP/crotonase-like_dom_sf