prot_F-serratus_M_contig105.525.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.525.1
Unique Nameprot_F-serratus_M_contig105.525.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
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BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: K7M084_SOYBN (Ribonucloprotein n=4 Tax=Phaseoleae TaxID=163735 RepID=K7M084_SOYBN)

HSP 1 Score: 213 bits (541), Expect = 8.100e-69
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   L++TILDL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:   26 MTGETVNPKAYPLADAQLSITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI 153
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BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A0K9NT11_ZOSMR (Ribonucloprotein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NT11_ZOSMR)

HSP 1 Score: 211 bits (538), Expect = 9.890e-69
Identity = 105/125 (84.00%), Postives = 115/125 (92.00%), Query Frame = 0 
Query:    4 DGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            D VNPKAYPL+   LT+TILDL+QQAA++KQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVISCSVT+NE SQLK QIQ+LKD IE+LLI
Sbjct:    3 DKVNPKAYPLADSQLTITILDLVQQAANFKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVISCSVTSNEGSQLKQQIQSLKDAIEKLLI 127
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BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: I3NMQ2_HEVBR (Ribonucloprotein n=4 Tax=Hevea brasiliensis TaxID=3981 RepID=I3NMQ2_HEVBR)

HSP 1 Score: 211 bits (538), Expect = 1.020e-68
Identity = 106/128 (82.81%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TILDL+QQAA+YKQLKKGANEATKTLNRGISEFIVMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLK QIQ LKD IE+LLI
Sbjct:    1 MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKLQIQQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A0S3RJ84_PHAAN (Ribonucloprotein n=2 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0S3RJ84_PHAAN)

HSP 1 Score: 213 bits (541), Expect = 1.160e-68
Identity = 106/123 (86.18%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    6 VNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            VNPKAYPL+   LT+TILDL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:   42 VNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI 164
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: Q8LCC7_ARATH (Ribonucloprotein n=16 Tax=Brassicaceae TaxID=3700 RepID=Q8LCC7_ARATH)

HSP 1 Score: 211 bits (537), Expect = 1.450e-68
Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   L++TI+DL+QQA +YKQLKKGANEATKTLNRGISEF+VMAADAEPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NEASQLKSQIQ LKD IE+LLI
Sbjct:    1 MTGEVVNPKAYPLADSQLSITIMDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQHLKDAIEKLLI 128
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K7M084_SOYBN8.100e-6982.81Ribonucloprotein n=4 Tax=Phaseoleae TaxID=163735 R... [more]
A0A0K9NT11_ZOSMR9.890e-6984.00Ribonucloprotein n=1 Tax=Zostera marina TaxID=2965... [more]
I3NMQ2_HEVBR1.020e-6882.81Ribonucloprotein n=4 Tax=Hevea brasiliensis TaxID=... [more]
A0A0S3RJ84_PHAAN1.160e-6886.18Ribonucloprotein n=2 Tax=Phaseolus angularis TaxID... [more]
Q8LCC7_ARATH1.450e-6882.03Ribonucloprotein n=16 Tax=Brassicaceae TaxID=3700 ... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..128
NoneNo IPR availablePANTHERPTHR23105:SF117coord: 1..128
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..128
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryotePRINTSPR00883NUCLEARHMGcoord: 38..48
score: 87.27
coord: 8..21
score: 47.14
coord: 82..94
score: 81.54
coord: 21..36
score: 55.0
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 1.3E-26
score: 92.2
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 7.3E-52
score: 176.3
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 6..126
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:728791..767173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.525.1mRNA_F-serratus_M_contig105.525.1Fucus serratus malemRNAF-serratus_M_contig105 727728..767173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.525.1 ID=prot_F-serratus_M_contig105.525.1|Name=mRNA_F-serratus_M_contig105.525.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI
SCSVTTNEASQLKSQIQTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2_euk
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR004037Ribosomal_L7Ae_CS