prot_F-serratus_M_contig105.525.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.525.1
Unique Nameprot_F-serratus_M_contig105.525.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A7S1CD40_9STRA (Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD40_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.950e-69
Identity = 105/126 (83.33%), Postives = 116/126 (92.06%), Query Frame = 0 
Query:    3 EDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            +DGVNPKA+PL+  +L V ILDLIQQA++YKQLKKGANEATKTLNRGISE IV+ ADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI+CS+TTNE SQLK QI T+KD IE+LLI
Sbjct:    6 KDGVNPKAFPLADAELVVKILDLIQQASNYKQLKKGANEATKTLNRGISELIVLTADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEGSQLKPQINTMKDAIERLLI 131
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A438C0R9_VITVI (Ribonucloprotein n=6 Tax=rosids TaxID=71275 RepID=A0A438C0R9_VITVI)

HSP 1 Score: 213 bits (542), Expect = 2.680e-69
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 0 
Query:    2 AEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            A + VNPKAYPL+   LT+TILDLIQQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:    4 AGEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 130
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A4S8K1B5_MUSBA (Ribonucloprotein n=7 Tax=Magnoliopsida TaxID=3398 RepID=A0A4S8K1B5_MUSBA)

HSP 1 Score: 213 bits (543), Expect = 3.410e-69
Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            ++ + VNPKAYPL+   LT+TILDLIQQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:   21 LSTEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 148
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: B7FKG0_MEDTR (Ribonucloprotein n=172 Tax=Viridiplantae TaxID=33090 RepID=B7FKG0_MEDTR)

HSP 1 Score: 213 bits (541), Expect = 3.560e-69
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TI+DL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAADAEPLEILLHLPLL EDKNVPYVFV SK ALGRACGV+RPVI+CSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:    1 MTGEAVNPKAYPLADAQLTITIMDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVTSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: K4CRG8_SOLLC (Ribonucloprotein n=8 Tax=Solanales TaxID=4069 RepID=K4CRG8_SOLLC)

HSP 1 Score: 213 bits (541), Expect = 3.560e-69
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            MA + VNPKAYPL+   LT TI+DL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:    1 MATETVNPKAYPLADSQLTTTIMDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: C1DZB3_MICCC (Ribonucloprotein n=4 Tax=Chlorophyta TaxID=3041 RepID=C1DZB3_MICCC)

HSP 1 Score: 212 bits (540), Expect = 4.740e-69
Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    6 VNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            VNPKAYPL+   LT+TILD++QQAA+YKQLKKGANEATKTLNRGISEF+V+AAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGVSRPVISCSVTTNE SQLK+QIQ LKD IE+LLI
Sbjct:    4 VNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGISEFVVLAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVSRPVISCSVTTNEGSQLKTQIQNLKDAIEKLLI 126
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A5B6ZQ35_DAVIN (Ribonucloprotein n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZQ35_DAVIN)

HSP 1 Score: 212 bits (539), Expect = 7.190e-69
Identity = 105/128 (82.03%), Postives = 116/128 (90.62%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TILDLIQQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQL+S+IQ LKD IE+LLI
Sbjct:    1 MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLRSEIQQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A022QHN0_ERYGU (Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A022QHN0_ERYGU)

HSP 1 Score: 212 bits (539), Expect = 7.190e-69
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  D VNPKAYPL+   LT+TILDL+QQ A+YKQLKKGANEATKTLNRGISEF+VMAADAEPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVTTNE SQL++QI  LKD IE+LLI
Sbjct:    1 MTADAVNPKAYPLADAQLTITILDLVQQGANYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLRAQILQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A1Y1HZ01_KLENI (Ribonucloprotein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZ01_KLENI)

HSP 1 Score: 212 bits (539), Expect = 7.190e-69
Identity = 106/128 (82.81%), Postives = 115/128 (89.84%), Query Frame = 0 
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TILD++QQAA+YKQLKKGANEATKTLNRGI+EFIVMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGVSRPVIS SVTTNE SQLK+QIQ LKD IE+LLI
Sbjct:    1 MGSEAVNPKAYPLADAQLTITILDIVQQAANYKQLKKGANEATKTLNRGIAEFIVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVSRPVISASVTTNEGSQLKTQIQQLKDAIEKLLI 128
[Close]
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A6J1CUU5_MOMCH (Ribonucloprotein n=10 Tax=rosids TaxID=71275 RepID=A0A6J1CUU5_MOMCH)

HSP 1 Score: 212 bits (539), Expect = 7.430e-69
Identity = 105/123 (85.37%), Postives = 114/123 (92.68%), Query Frame = 0 
Query:    6 VNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            VNPKAYPL+   LT+TILDL+QQAA+YKQ+KKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:    7 VNPKAYPLADAQLTITILDLVQQAANYKQIKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLKDAIEKLLI 129
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CD40_9STRA1.950e-6983.33Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 T... [more]
A0A438C0R9_VITVI2.680e-6984.25Ribonucloprotein n=6 Tax=rosids TaxID=71275 RepID=... [more]
A0A4S8K1B5_MUSBA3.410e-6982.81Ribonucloprotein n=7 Tax=Magnoliopsida TaxID=3398 ... [more]
B7FKG0_MEDTR3.560e-6982.81Ribonucloprotein n=172 Tax=Viridiplantae TaxID=330... [more]
K4CRG8_SOLLC3.560e-6982.81Ribonucloprotein n=8 Tax=Solanales TaxID=4069 RepI... [more]
C1DZB3_MICCC4.740e-6985.37Ribonucloprotein n=4 Tax=Chlorophyta TaxID=3041 Re... [more]
A0A5B6ZQ35_DAVIN7.190e-6982.03Ribonucloprotein n=2 Tax=Davidia involucrata TaxID... [more]
A0A022QHN0_ERYGU7.190e-6982.03Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=143... [more]
A0A1Y1HZ01_KLENI7.190e-6982.81Ribonucloprotein n=1 Tax=Klebsormidium nitens TaxI... [more]
A0A6J1CUU5_MOMCH7.430e-6985.37Ribonucloprotein n=10 Tax=rosids TaxID=71275 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..128
NoneNo IPR availablePANTHERPTHR23105:SF117coord: 1..128
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..128
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryotePRINTSPR00883NUCLEARHMGcoord: 38..48
score: 87.27
coord: 8..21
score: 47.14
coord: 82..94
score: 81.54
coord: 21..36
score: 55.0
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 1.3E-26
score: 92.2
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 7.3E-52
score: 176.3
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 6..126
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:728791..767173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.525.1mRNA_F-serratus_M_contig105.525.1Fucus serratus malemRNAF-serratus_M_contig105 727728..767173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.525.1 ID=prot_F-serratus_M_contig105.525.1|Name=mRNA_F-serratus_M_contig105.525.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI
SCSVTTNEASQLKSQIQTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2_euk
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR004037Ribosomal_L7Ae_CS