prot_F-serratus_M_contig105.525.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.525.1
Unique Nameprot_F-serratus_M_contig105.525.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length129
Homology
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: D7G2C5_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C5_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 1.590e-81
Identity = 122/128 (95.31%), Postives = 127/128 (99.22%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            MAEDGVNPKAYPL+GPDLTVTILDLIQQA++YKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++CSVTTNEASQLKSQI TLKDQIEQLLI
Sbjct:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A835Z1Z7_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.580e-76
Identity = 115/125 (92.00%), Postives = 121/125 (96.80%), Query Frame = 0
Query:    4 DGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            D +NPKAYPL+G DLTVTILDL+QQAA+YKQLKKGANEATKTLNRGISEFIVMAADA+PLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIS SVTTNEASQLK QIQ+LKDQIEQLLI
Sbjct:    3 DEINPKAYPLAGADLTVTILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADADPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISASVTTNEASQLKEQIQSLKDQIEQLLI 127          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A7S2FW40_9STRA (Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2FW40_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.980e-72
Identity = 111/128 (86.72%), Postives = 120/128 (93.75%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            MAE  VNPKAYPL+  ++TV ILDL+QQA +YKQLKKGANEATKTLNRGISEF+V+AADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVT+NEASQLK QIQT+KD IEQLLI
Sbjct:    1 MAE--VNPKAYPLADAEMTVKILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQLKDQIQTMKDNIEQLLI 126          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: L1I7R9_GUITC (Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 RepID=L1I7R9_GUITC)

HSP 1 Score: 217 bits (552), Expect = 7.020e-71
Identity = 108/123 (87.80%), Postives = 117/123 (95.12%), Query Frame = 0
Query:    6 VNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            VNPKA+PL+ PDL+VTIL+L+QQA++YKQLKKGANEATKTLNRGISEFIVMAAD EPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSRPVI+ SVTTNE SQLK QIQTLKDQIE+LLI
Sbjct:    4 VNPKAFPLAPPDLSVTILELVQQASNYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTTNEGSQLKGQIQTLKDQIEKLLI 126          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A7S2XVU5_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVU5_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.210e-70
Identity = 108/126 (85.71%), Postives = 116/126 (92.06%), Query Frame = 0
Query:    3 EDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            E   NPKAYPL+GP+LTV+I DL QQA++YKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ALGRACGVSRPVI+ S+TTNEASQLK QIQ  KD IEQLLI
Sbjct:    7 ELATNPKAYPLAGPELTVSIYDLTQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIAASITTNEASQLKEQIQRTKDAIEQLLI 132          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A7J7GND5_CAMSI (Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GND5_CAMSI)

HSP 1 Score: 215 bits (548), Expect = 3.050e-70
Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT+TILDL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NEASQLKSQIQ LKD IE+LLI
Sbjct:    1 MTAEAVNPKAYPLADSQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A804K312_MUSAM (Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A804K312_MUSAM)

HSP 1 Score: 214 bits (546), Expect = 6.160e-70
Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M+ + VNPKAYPL+   LT+TILDLIQQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:    1 MSTEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A6A3D174_HIBSY (Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A3D174_HIBSY)

HSP 1 Score: 214 bits (545), Expect = 9.340e-70
Identity = 108/128 (84.38%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M  + VNPKAYPL+   LT TILDL+QQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPVISCSVTTNE SQLKSQIQ LKD IE+LLI
Sbjct:    3 MTGEPVNPKAYPLADAQLTTTILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKKALGRACGVTRPVISCSVTTNEGSQLKSQIQQLKDAIEKLLI 130          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A0D2WIZ2_CAPO3 (Ribonucloprotein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WIZ2_CAPO3)

HSP 1 Score: 213 bits (543), Expect = 1.710e-69
Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0
Query:    4 DGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            +GVNPKAYPL+ P LT TIL+L+QQAA+YKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ LGRACGVSRPVIS SVT+NE+SQL+ QIQ LK  IE+LL+
Sbjct:    3 EGVNPKAYPLADPQLTTTILELVQQAANYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKLGLGRACGVSRPVISASVTSNESSQLRGQIQQLKTSIEKLLV 127          
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Match: A0A1D1XNP3_9ARAE (Ribonucloprotein (Fragment) n=4 Tax=Liliopsida TaxID=4447 RepID=A0A1D1XNP3_9ARAE)

HSP 1 Score: 214 bits (545), Expect = 1.930e-69
Identity = 105/128 (82.03%), Postives = 117/128 (91.41%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTTNEASQLKSQIQTLKDQIEQLLI 128
            M ++ VNPKAYPL+   LT+TILDLIQQAA+YKQLKKGANEATKTLNRGISEF+VMAAD EP+EILLHLPLL EDKNVPYVF+PSK ALGRACGV+RPVI+CSVT+NE SQLKSQIQ LKD IE+LLI
Sbjct:   25 MTQEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPIEILLHLPLLAEDKNVPYVFIPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 152          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C5_ECTSI1.590e-8195.31Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835Z1Z7_9STRA9.580e-7692.00Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S2FW40_9STRA2.980e-7286.72Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 ... [more]
L1I7R9_GUITC7.020e-7187.80Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 ... [more]
A0A7S2XVU5_9STRA1.210e-7085.71Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A7J7GND5_CAMSI3.050e-7083.59Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4... [more]
A0A804K312_MUSAM6.160e-7083.59Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A... [more]
A0A6A3D174_HIBSY9.340e-7084.38Ribonucloprotein n=2 Tax=Mesangiospermae TaxID=143... [more]
A0A0D2WIZ2_CAPO31.710e-6984.00Ribonucloprotein n=1 Tax=Capsaspora owczarzaki (st... [more]
A0A1D1XNP3_9ARAE1.930e-6982.03Ribonucloprotein (Fragment) n=4 Tax=Liliopsida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 102..128
NoneNo IPR availablePANTHERPTHR23105:SF117coord: 1..128
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..128
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryotePRINTSPR00883NUCLEARHMGcoord: 38..48
score: 87.27
coord: 8..21
score: 47.14
coord: 82..94
score: 81.54
coord: 21..36
score: 55.0
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 1.3E-26
score: 92.2
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 7.3E-52
score: 176.3
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 6..126
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:728791..767173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.525.1mRNA_F-serratus_M_contig105.525.1Fucus serratus malemRNAF-serratus_M_contig105 727728..767173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.525.1 ID=prot_F-serratus_M_contig105.525.1|Name=mRNA_F-serratus_M_contig105.525.1|organism=Fucus serratus male|type=polypeptide|length=129bp
MAEDGVNPKAYPLSGPDLTVTILDLIQQAASYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVI
SCSVTTNEASQLKSQIQTLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2_euk
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR004037Ribosomal_L7Ae_CS