prot_F-serratus_M_contig105.519.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.519.1
Unique Nameprot_F-serratus_M_contig105.519.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length792
Homology
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A7N8XDK0_9TELE (Calpain-2 catalytic subunit-like n=9 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A7N8XDK0_9TELE)

HSP 1 Score: 124 bits (311), Expect = 1.280e-25
Identity = 141/595 (23.70%), Postives = 230/595 (38.66%), Query Frame = 0
Query:  130 IPNGTLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCVLEAFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWSARPTLASELLPRT-LPGMFWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRWE-GPMCGGRFTDGKGWLAGTQAFLQIEP--CSPKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPKLSKIVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKS 717
            + +G L+ED  FP +  S+   E  + P       + W RP+E+    Q   F  D      I  G L D WLL+A+A LT    +L  +    Q   ++ AG +  + ++   W+DV VD R+P   D K+LF H  E  E W  L+EKA++K +GCYENL  G+T E   D TGG+AE                               ++  A P L                  F  M+  +S G +LGCS+   +   +E +                                + +++KG +  V       +    ++LVR+++PW          ++ G W   S  W+         L R    G FWM++  F++ F+ L   +L  D                  LT+    + S   F     EG W  G   GG   +   + +  Q  +++E     P   +   T                 + L Q++    G+     +    +IGF ++ ++    +VR  P +  +++     ++  F+  R+V     LPPG+YAI+P+T  P   G F + V S
Sbjct:   40 LKSGRLFEDDCFPAEAKSLGFNE--LGPYSSKTRGVVWKRPTELCSNPQ---FIQDGATRTDICQGVLGDCWLLAAIASLTLDKDILARVVPPEQSFTEDYAGIFHFQFWQFGEWVDVVVDDRLPTR-DDKLLFVHSAEGSEFWSALLEKAYSKVNGCYENLTGGNTIEGFEDFTGGIAEIY-----------------------------RLDKAPPKL------------------FHIMQKALSLGSLLGCSID--ITSAYETE-----------------------------AVTALKLVKGHAYSVTGAEEVHYRGKPVQLVRIRNPWG-------QVEWTGPWSDGSSEWNYITEDEKAKLSRVDEDGEFWMSYSDFIKHFSRLEICNLTPDT-----------------LTSDDVGRWSHHQF-----EGTWRIGSTAGGCRNNAATFSSNPQFVVRLEEEDDQPLDGKHGCT---------------FLVGLMQKE----GRKQKRLNRDLETIGFAIYEYQG-CNNVRLGPDV--LLRQRAVAMSSSFINTREVCDRFRLPPGEYAIIPSTFNPHRNGTFILRVFS 499          
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: UPI001126640D (calpain-3 isoform X1 n=5 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI001126640D)

HSP 1 Score: 124 bits (310), Expect = 2.120e-25
Identity = 152/606 (25.08%), Postives = 244/606 (40.26%), Query Frame = 0
Query:  134 TLWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLFQHTGQ---EDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCV--LE--AFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLW-----SARPTLASELLPRTLPGMFWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRW-EGPMCGGRFTDGKGWLAGTQAFLQI--EPCSPKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPK-LSK--IVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKSADPN 721
            TL+ED+DF  +++S+   + +       P   +W RP EI +  Q ++   +      I  G+L D W L+A+A LT    LL  +  H        AG +  + ++  NW+DV +D R+P   D +++F     R+E W  L+EKA+AK HG YE L  G T EA+ D TGGV E  +         ++  +   R            G    C    G G S G    S           + G ++   +Q+ + D     D +S   ++          K   G   + F    R+  G+    AY V  LE  A++TDK++LVRL++PW G+       ++ G W  +S  W     S +  L  ++L     G FW++F+ F++ F  L   +L  D                           S   +     EGRW  G   GG       +    Q  L++  E   P   E   +   A+  +N  K+  +   L                    +IGF ++    + + + G  + L K   + N +K     ++  R++S    LPP +Y I+P+T  P   G F + V S   N
Sbjct:   67 TLFEDADFLANETSLFYSQHL-------PIKFQWKRPPEICENPQFIIGGANRTD---ICQGELGDCWFLAAIASLTLNEKLLFRVIPHEQNFTDNYAGIFHFQFWRYGNWVDVVIDDRLPTYND-QLVFTKSSHRNEFWSALLEKAYAKLHGSYEALKGGSTTEAMEDFTGGVTEFYEIKDAPKDLFKIMKKATER------------GSLMGCSIDDGRGFSYGLAPQS-----------NLGDLIARMMQS-VGDALVSTDLDSKGTDE----------KPALGIVPLRF--ETRMQNGLVKGHAYSVTGLEEIAYKTDKVKLVRLRNPW-GKV------EWNGSWSDRSKEWNVIEKSEKVRLQHDILE---DGEFWISFEDFMDNFTKLEICNLTADA----------------------LESDSLQVWTVSVNEGRWVRGCTAGGCRNYPDTFWTNPQYRLKLFEEDDDPDDKEVVCSFLVALMQKNRRKERKLGANLF-------------------TIGFAIYE---VPKEMHGNKQHLQKDFFLYNASKAKCKSYINMREISERFRLPPSEYVIIPSTYEPHQEGEFILRVFSEKRN 571          
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: UPI001AAC9930 (calpain-3 isoform X1 n=9 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAC9930)

HSP 1 Score: 123 bits (309), Expect = 2.660e-25
Identity = 152/625 (24.32%), Postives = 238/625 (38.08%), Query Frame = 0
Query:  135 LWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSL----------------QTWLRDPWEDQDEESNTPNQDDGVEMNRRRKAPSGRNGMLFPPSN---RIMKGVSSWVAYCVL----EAFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWSARPTLASELLPRTLP--GMFWMAFDTFVEVFNTLYAVDLAEDI----EGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRW-EGPMCGGRFTDGKGWLAGTQAFLQI--EPCSPKRSESAMTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPK-LSK--IVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKSADPN 721
            L++D +FP D+SS+   +         P    W RP EI +  Q ++   +      I  G L D W L+A+A LT    LL  +    Q+  +  AG +  + ++  +WIDV +D  +P + + +++F    +R+E W  L+EKA+AK HG YE L  G+T EA+ D TGGV E  +                             + DA   L                  F  MK    RG ++GCS+                Q  +R    + D++        G+E     K    +  +   PS    R+  G+    AY V       F+ DK++LVRL++PW          ++ G W   S  W+         L   +   G FWM+FD F++ F  L   +L  D     + QT     N                          EGRW  G   GG       +    Q  L++  E   P+ +E   +   A+  +N  K   +   L                    +IGF ++    + + + G  + L K   + N +K     ++  R+VS    LPP +Y I+P+T  P   G F + V S   N
Sbjct:   66 LFQDREFPADESSLFYSQTF-------PVKFEWKRPPEICENPQFIIGGANRTD---ICQGDLGDCWFLAAIACLTLNEKLLFRVIPPEQNFTENYAGIFHFQFWRYGDWIDVIIDDCLP-TFNNQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYE-----------------------------IKDAPKDL------------------FKIMKKAFERGSLIGCSIDEANGLSYGISPPDMGQALIRMIQSEGDKQP-------GLEG----KGLEPKPYVAIVPSQFETRMASGLVKGHAYSVTGVEETTFKADKVKLVRLRNPWG-------QVEWNGSWSDNSKEWNIIDKSEKSRLQHQIKEDGEFWMSFDDFMKNFTKLEICNLTADALESDQLQTWTVSVN--------------------------EGRWVRGCSAGGCRNFPDTYWTNPQYRLKLLEEDDDPEDNEVVCSFLVALMQKNRRKDRKMGANLF-------------------TIGFAIYE---VPKEMHGNKQHLQKDFFLYNASKDRCKSYINMREVSQRFRLPPSEYVIIPSTYEPHQEGEFILRVFSEKRN 566          
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: UPI001CF53F96 (calpain-3 isoform X1 n=6 Tax=Bufo TaxID=8383 RepID=UPI001CF53F96)

HSP 1 Score: 123 bits (308), Expect = 3.530e-25
Identity = 153/624 (24.52%), Postives = 243/624 (38.94%), Query Frame = 0
Query:  135 LWEDSDFPVDQSSICLREGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTGWGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESN--TPNQDDGVEMNRRRKAPSGR-----NGMLFPP--------SNRIMKGVSSWVAYCVL----EAFETDKLRLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWSARPTLASELLPRTL--PGMFWMAFDTFVEVFNTLYAVDLAEDI---EGQTTGGMANNNKQEKKLTNKRAHKSSAIGFREGRCEGRW-EGPMCGGRFTDGKGWLAGTQAFLQI--EPCSPKRSESAMTTPSAV--KARNADKKA--NIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHSHKWLAESVRGIPK-LSK--IVQNETKHVTCPFVPRRDVSIHLALPPGQYAILPTTLVPGTPGRFWVHVKSADPN 721
            L+ED DFP +++S+   +         P    W RP EI +  + ++   +      I  G L D W L+A+A LT    LL  +    Q+  +  AG +  + ++  +W+DV +D  +P + + +++F    +R+E W  L+EKA+AK HG YE L  G+T EA+ D TGGV E  +            ++  P+                                    +F  +K    RG ++GCS+        +D+D  S    P  D G  M +  +          N    PP          R+  G+    AY V      AF+ DK++LVRL++PW          ++ G W   S  W+         L   +   G FWM+FD F++ F  L   +L  D    +   T  ++ N                         EGRW  G   GG       +    Q  L++  E   P  +E   +   A+  K R  D+KA  N+Y                       +IGF ++    + + + G  + L K   + N +K     ++  R+VS    LPP +Y I+P+T  P   G F + V S   N
Sbjct:   65 LFEDRDFPANETSLFYSQTF-------PVKFEWKRPPEICENPEFIIGGANRTD---ICQGDLGDCWFLAAIACLTLNEKLLFRVIPPDQNFTENYAGIFHFQFWRYGDWVDVVIDDCLP-TFNNQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYE------------IKEAPKD-----------------------------------LFRILKKAFERGSLIGCSI--------DDKDHFSFGVVPPSDMGEAMKKMIEGVGDTHHDCDNSHPKPPLAIVPAHFETRMASGLVKGHAYSVTGVEETAFKRDKVKLVRLRNPWG-------QVEWNGSWSDNSKEWTVIDKSEKSRLQHQINEDGEFWMSFDDFMKNFTKLEICNLTADALESDSLQTWTVSVN-------------------------EGRWVRGCSAGGCRNFPDTYWTNPQYRLKLLEEDDDPDDNEVVCSFLVALMQKNRRKDRKAGANLY-----------------------TIGFAIYE---VPKEMHGNKQHLQKDFFLYNASKDRCKSYINMREVSQRFRLPPSEYVIIPSTYEPHQEGDFILRVFSEKRN 564          
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Match: A0A7S0HLP1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HLP1_9CRYP)

HSP 1 Score: 122 bits (306), Expect = 3.850e-25
Identity = 66/177 (37.29%), Postives = 97/177 (54.80%), Query Frame = 0
Query:  165 IRWLRPSEIAKGDQTVLFAGDFPGDGP---------IVPGQLADQWLLSAMAILTGRPHLLRLLF---QHTGQEDAGRYCIRLFKDANWIDVFVDSRVPCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDLTGGVAEKLQWARFSASSTRMTLELQPRIQ 329
            IRWLRPS+I+     V    + P   P         +  G L D W + A+A+L  RP L+R LF        E+ G Y +R +K+  W+++ VD R+P ++ G  LF   Q+  E+W  ++EKA+AK HGCYE L  G    AL+DLTGGV +KL+++          LE++ RI+
Sbjct:   93 IRWLRPSQISYDSLDVKIGAERPKLYPKESQAMFPYVAMGALGDSWFVGALALLASRPELVRQLFVGYTSPSCENCGIYTVRFYKNGKWVNITVDDRLPATLQGNFLFSRSQKGTELWLPVLEKAYAKLHGCYELLFQGSVQYALKDLTGGVPQKLKFS---------DLEVEARIK 260          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7N8XDK0_9TELE1.280e-2523.70Calpain-2 catalytic subunit-like n=9 Tax=Mastacemb... [more]
UPI001126640D2.120e-2525.08calpain-3 isoform X1 n=5 Tax=Rhinatrema bivittatum... [more]
UPI001AAC99302.660e-2524.32calpain-3 isoform X1 n=9 Tax=Rana temporaria TaxID... [more]
UPI001CF53F963.530e-2524.52calpain-3 isoform X1 n=6 Tax=Bufo TaxID=8383 RepID... [more]
A0A7S0HLP1_9CRYP3.850e-2537.29Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022684Peptidase C2, calpain familyPRINTSPR00704CALPAINcoord: 120..143
score: 21.94
coord: 258..281
score: 44.31
coord: 227..252
score: 28.97
coord: 283..310
score: 49.17
IPR001300Peptidase C2, calpain, catalytic domainSMARTSM00230cys_prot_2coord: 122..525
e-value: 6.9E-15
score: 57.8
IPR001300Peptidase C2, calpain, catalytic domainPFAMPF00648Peptidase_C2coord: 136..516
e-value: 2.9E-50
score: 171.0
IPR001300Peptidase C2, calpain, catalytic domainPROSITEPS50203CALPAIN_CATcoord: 135..521
score: 40.359
IPR022682Peptidase C2, calpain, large subunit, domain IIIPFAMPF01067Calpain_IIIcoord: 601..715
e-value: 2.4E-9
score: 37.6
NoneNo IPR availableGENE3D3.90.70.10coord: 424..528
e-value: 4.8E-12
score: 47.3
NoneNo IPR availableGENE3D2.60.120.380coord: 554..723
e-value: 1.6E-14
score: 56.2
NoneNo IPR availablePANTHERPTHR10183CALPAINcoord: 122..721
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..791
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 561..720
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 120..518

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:537527..554049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.519.1mRNA_F-serratus_M_contig105.519.1Fucus serratus malemRNAF-serratus_M_contig105 536153..554503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.519.1 ID=prot_F-serratus_M_contig105.519.1|Name=mRNA_F-serratus_M_contig105.519.1|organism=Fucus serratus male|type=polypeptide|length=792bp
MFDRLLPGGSPLLILRQRCAFALLCSASIGEKADFVHSLFDFRSEGDLNL
DEVTILLRTALLASAKLDNRVQVPQTETLEELCRLAFDQTGLDHEGELPK
HLFDSFIAKDQQATAFLQFWSEGSVNHVLIPNGTLWEDSDFPVDQSSICL
REGVISPSLPPPEAIRWLRPSEIAKGDQTVLFAGDFPGDGPIVPGQLADQ
WLLSAMAILTGRPHLLRLLFQHTGQEDAGRYCIRLFKDANWIDVFVDSRV
PCSVDGKVLFCHGQERHEMWGYLVEKAFAKAHGCYENLMHGDTCEALRDL
TGGVAEKLQWARFSASSTRMTLELQPRIQPDTSPASGKVGDATPCLRLTG
WGLSAGETRSSGWIFDEMKNRISRGQVLGCSLQTWLRDPWEDQDEESNTP
NQDDGVEMNRRRKAPSGRNGMLFPPSNRIMKGVSSWVAYCVLEAFETDKL
RLVRLKDPWSGRFFGAQPGQYLGDWGPKSPLWSARPTLASELLPRTLPGM
FWMAFDTFVEVFNTLYAVDLAEDIEGQTTGGMANNNKQEKKLTNKRAHKS
SAIGFREGRCEGRWEGPMCGGRFTDGKGWLAGTQAFLQIEPCSPKRSESA
MTTPSAVKARNADKKANIYITLTQEDSRYHGKDYSTRDERRRSIGFLVHS
HKWLAESVRGIPKLSKIVQNETKHVTCPFVPRRDVSIHLALPPGQYAILP
TTLVPGTPGRFWVHVKSADPNAILLKASATNSEVIGPNPGECEMPLRETG
ASLGVVYNEAEEDAEGNVRNVDVVNMLGLCARMARVASQQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022684Calpain_cysteine_protease
IPR001300Peptidase_C2_calpain_cat
IPR022682Calpain_domain_III
IPR036213Calpain_III_sf
IPR038765Papain-like_cys_pep_sf