prot_F-serratus_M_contig105.504.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.504.1
Unique Nameprot_F-serratus_M_contig105.504.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length485
Homology
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A0K9PP27_ZOSMR (Beta-phosphoglucomutase family hydrolase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PP27_ZOSMR)

HSP 1 Score: 99.4 bits (246), Expect = 3.820e-19
Identity = 77/272 (28.31%), Postives = 131/272 (48.16%), Query Frame = 0
Query:  200 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWTPEQMFIRE-FNWRLSQEELEGG----IEIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADREFEPGMLALELEPEAA----PRRKTVVAT 462
            +N  +    +QR  +   PD +FG +F  D +V     L   AW ++A    ++ PS + VQR          +++   W   + EL+      +++Y   ++  +   KP E  G R WL  L    +P AV+S L    +   LER DL  YF   +T ED        ++ AA+K+ R   KC  F+    G+  AH+  +  +  IG   A++L  AD +V SF+D++V++ R++FA +    G   ++L+ +A     PRRK  +++
Sbjct:   97 LNNKLQECFLQRIRHAMKPDEAFGLIFSWDNVVAHTHSLKMDAWKKLAAEEGKDMPSESHVQRTMLHAAAYHVLKKVLFWGSDENELKRLNSRLLQLYHDNLINLS---KPME--GLREWLGALYTAGIPCAVVSCLDRKHMLESLERMDLKKYFQAVITDEDGMESIAHRFLSAAVKLDRKPSKCIVFEDDPRGVTAAHNCTMMAIALIGPHPAYDLVQADLAVASFNDLSVINLRRLFAHK----GPRFMDLQKQAIEDSRPRRKLTISS 359          
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2C9V235_MANES (Uncharacterized protein n=4 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9V235_MANES)

HSP 1 Score: 99.0 bits (245), Expect = 5.180e-19
Identity = 68/245 (27.76%), Postives = 116/245 (47.35%), Query Frame = 0
Query:  200 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGGIEIYDRTILRCALKYKP------EEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADR 437
            +N+ +    ++R  Y   PD ++G +F  D +V     +    W ++A    +  P     QR   +   + +  +  +W  ++ E+       DR  LR +  Y        E I G + WL+ + R  +P AV+S L    +   LER  L  YF   VT+ED        ++ AALK+ R   KC  F+    G+  AH+  +  V  IG   A+EL  AD +V SF++++V++ R++FA++
Sbjct:  100 LNDRLQEGFLKRIRYAMKPDEAYGLIFSWDNVVADTRAMKLNVWKQLASEEGKEIPDDGHAQRLMLYAGADHVLHKVLHWETAENEI-------DRLKLRLSQLYYDHLLRLRESIEGLKAWLDAVARARIPCAVVSSLDRVNMVGTLERMGLKNYFQAIVTEEDGMESIAHKFLSAALKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYELVQADLAVASFNELSVINLRRLFANK 337          
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2P2JTS3_RHIMU (Uncharacterized protein MANES_07G138100 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JTS3_RHIMU)

HSP 1 Score: 98.2 bits (243), Expect = 8.910e-19
Identity = 64/243 (26.34%), Postives = 117/243 (48.15%), Query Frame = 0
Query:  200 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGG----IEIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADR 437
            +N+ +    ++R  Y   PD ++G +F  D +V     +    W ++A    +  P     QR   +   + +  +   W +++ EL+       ++Y   +LR A     E I G + WL+ + +  +P AV+S L  + +   LER  L  YF   V  ED        ++ AA+K+ R   KC  F+    G+  AH+  +  V  IG   A++L  AD +V SF++++V++ R++FA++
Sbjct:   95 LNDRLQEGFLRRIRYAMKPDEAYGLIFSWDNVVTNTRAIKLNVWKQLASEEGEEIPEDEHTQRLLLYAGADHLLHKVLRWEIAESELDRLKLRLSQLYCDNLLRLA-----EPIEGLKEWLDAVCKAHIPCAVVSSLDRTNMVAALERMGLKKYFQAIVADEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGITAAHNCTMMAVALIGAHPAYDLVQADLAVASFNELSVINLRRLFANK 332          
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A5N5F072_9ROSA (Pseudouridine-5'-monophosphatase-like n=9 Tax=Amygdaloideae TaxID=171637 RepID=A0A5N5F072_9ROSA)

HSP 1 Score: 98.2 bits (243), Expect = 9.600e-19
Identity = 69/268 (25.75%), Postives = 127/268 (47.39%), Query Frame = 0
Query:  200 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWT-PEQMFIREFNWRLSQEELEGGI----EIYDRTILRCALKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADREFEPGMLALELEPEAAPRRKTVVAT 462
            +N+ +    ++R  Y   PD ++G +F  D +V     +   AW ++A    +  P    +QR   +   + +  +   W     EL+       ++Y   +LR +     E + G + WL+ +    +P AV+S L    +   LER  L  YF   VT+ED        ++ AA+K+ R   KC  F+    G+  AH+  +  V  IG   A++L  AD +V SF++++V++ R++FA++      L  ++  ++ P+RK  + T
Sbjct:  101 LNDKLQEGFLKRIRYAMKPDEAYGLIFSFDNVVADTRTMKLNAWKQLASEEGKELPEDAVLQRRMLYAGADHVLHKLLLWDKEDGELDRLALKFSQLYYDNLLRLS-----EPVEGIKEWLDAVSTARIPCAVVSSLDRRNMTEALERMGLKKYFQAIVTEEDGMDSIAHRFLSAAVKLDRKPSKCVVFEDEPRGITAAHNCTMMAVALIGAHPAYDLVQADLAVASFNELSVINLRRLFANKGSTFMDLQKQIIEKSPPKRKLTIDT 363          
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Match: A0A2Z7BKT1_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BKT1_9LAMI)

HSP 1 Score: 97.8 bits (242), Expect = 1.270e-18
Identity = 68/243 (27.98%), Postives = 117/243 (48.15%), Query Frame = 0
Query:  200 VNEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARALNQNAPSLNTVQRGYGWTPEQMFIRE-FNWRLSQEELEGGIEIYDRTILRCALKYK------PEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFPHRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRGVCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFA 435
            +N+ M    +QR  Y   PD ++G +F  D +V     L   AW ++A    +  P  ++VQR   +      +R+   W +++ +L       DR  LR +  Y        E I G + WL+ +    +P AV+S L    +   LER  L  +F   V++ED        ++ AA+K+ R   KC  F+    G+  AH+  +  +  IG   A++L  AD +V SF++++V++ R++FA
Sbjct:   99 LNDRMQEGFLQRIRYAMKPDEAYGLIFSWDNVVANTRALKLNAWEKLASEEGKKIPRDDSVQRVLHYAGADHVLRKVLLWGMAEADL-------DRLKLRLSELYYHNLVELSEPIEGLKEWLDAIATSRIPCAVVSSLDRKNMVEALERMGLKKFFQAIVSEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGIAAAHNCTMMAIALIGAHPAYDLGQADLAVASFNELSVINLRRLFA 334          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0K9PP27_ZOSMR3.820e-1928.31Beta-phosphoglucomutase family hydrolase n=1 Tax=Z... [more]
A0A2C9V235_MANES5.180e-1927.76Uncharacterized protein n=4 Tax=Manihot esculenta ... [more]
A0A2P2JTS3_RHIMU8.910e-1926.34Uncharacterized protein MANES_07G138100 n=1 Tax=Rh... [more]
A0A5N5F072_9ROSA9.600e-1925.75Pseudouridine-5'-monophosphatase-like n=9 Tax=Amyg... [more]
A0A2Z7BKT1_9LAMI1.270e-1827.98Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 296..430
e-value: 1.5E-9
score: 39.8
NoneNo IPR availablePANTHERPTHR47858FAMILY NOT NAMEDcoord: 200..462
NoneNo IPR availablePANTHERPTHR47858:SF2HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEINcoord: 200..462
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..485
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..41
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.488
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 229..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:241903..266765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.504.1mRNA_F-serratus_M_contig105.504.1Fucus serratus malemRNAF-serratus_M_contig105 241877..266765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.504.1 ID=prot_F-serratus_M_contig105.504.1|Name=mRNA_F-serratus_M_contig105.504.1|organism=Fucus serratus male|type=polypeptide|length=485bp
MRSKHGSQGHEFSCAALVMAVAAAAATGGATAASAAATASAGAAGMQGVA
AHAHTRLAFAGTAGAIVDPTQRTQAFSMTLAAPPQKAQVTHRGADSLRRR
RRRRPFDGNSGDVEGGGWGAECGEGIGIRFGIVAGSIAGADRRGNDGRSG
GIRLGVPLMGGWHPAAEPEEDSEEDTHYDSWRKMRVEEIVKDPFLTPGRV
NEIMDPSNVQRHMYNTNPDSSFGAVFQLDTLVNVIPGLIYPAWLEVARAL
NQNAPSLNTVQRGYGWTPEQMFIREFNWRLSQEELEGGIEIYDRTILRCA
LKYKPEEIPGSRRWLETLRRIPMPMAVLSRLPSSVVDLVLERTDLAGYFP
HRVTKEDEPFDDYRGYMLAALKVQRSTMKCCAFDCRQEGMIKAHDAELRG
VCKIGVMAAWELRLADYSVDSFDDMTVLDFRQIFADREFEPGMLALELEP
EAAPRRKTVVATKVEVETETSWADQDEPEVETLTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf