prot_F-serratus_M_contig105.501.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.501.1
Unique Nameprot_F-serratus_M_contig105.501.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length991
Homology
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Match: A0A2C9URU1_MANES (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9URU1_MANES)

HSP 1 Score: 149 bits (377), Expect = 5.710e-35
Identity = 111/360 (30.83%), Postives = 169/360 (46.94%), Query Frame = 0
Query:  115 AAGANHSVLLTKEGKLFRWGV-EDGDI-------YPFPAAVCTQIPLPCVEVSCGRKHTMALMKG-GFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTVPEPAPVDLTDVPPSRMGEAPKVLCGRHHSALVVSWGAMYSWGACSFGKLGLHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEGQGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCADGGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVN--APVLVRSLAPYRVLNVGCGGGHSLVV 463
            +AGA+HSV L     +  WG  EDG +        P P  + T   L  V V+CG  HT+A  +    V +WG G FG+LGHG+++    P+ +R L     G R+ Q+ACG  H   VT  G+V SWG N+ GQ G G+ ++++  P  +      P +M     V  G  H+A V   G +Y WG   +G LGL +    + VP +V+    + ++  A G  H +++S +  +Y++G+   GQ GHG       P  + A +   ++Q+  G   +MAVT DG  Y WG    G  G+                          G NV+  +P  V+     +V+ + CG  H+L V
Sbjct:   20 SAGASHSVALLSGNIVCTWGRGEDGQLGHGDAEDRPSPTQLNTLDGLEIVSVTCGADHTIAYSESHANVYSWGWGDFGRLGHGNSSDLFTPQPIRALH----GLRIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSL-VPQKIQAFQKIPIKM-----VAAGAEHTAAVTESGELYGWGWGRYGNLGLGDRRDRL-VPEKVSLSHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV--------------------------GDNVDHCSPEQVKFPNEQKVIQISCGWRHTLAV 342          
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Match: UPI000C71896F (E3 ubiquitin-protein ligase HERC2 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71896F)

HSP 1 Score: 157 bits (396), Expect = 5.840e-35
Identity = 119/398 (29.90%), Postives = 183/398 (45.98%), Query Frame = 0
Query:   84 EGSRI-----CSSIQPLPRAVSLDRYLKKGDAPAFAAAGANHSVLLTKEGKLFRWGVEDGDIYPFPAAV--CTQIPLPCVEVSCGRKHTMALMKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTVPEPAPVDLTDVPPSRMGEAPKVLCGRH--HSALVVSWGAMYSWGACSFGKLGLHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEGQGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCADGGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVNAPVLVRSLAPYRVLNVGCGGGHSLVVAVRRARNTL 472
            EG+++     C S+  L R V L      G      A  A+  V  T  G L R G+   +    P  +     + +  V V+ G KH +AL   G V +WG G  G+LGHG+  +Y  P+L+  L    LG  +V +ACGG+HSA ++ AG +F+WG  RYG+ G+G  D+ V    P  +T +   ++ +   V CG     +  V     ++SWG   +GKLG    D    VP ++   +   +++   G    VAL+R+  VY+WG G   + GHG+  H+R PR V+A + + +  +  G    +A +  G  Y+WG  D G  G                D  T  Q         +P LV +L       V CG  H+L  +  +A ++L
Sbjct: 4095 EGAKVKLPLPCDSLSAL-RPVQL-----AGGEQTLFAVTADGKVYATGYGALGRLGIGGVESAMVPTLLESIQHVYIKKVAVNSGGKHCLALSSEGHVYSWGEGEDGKLGHGNRLTYDRPKLIESL----LGTEIVDIACGGHHSAAISSAGWLFTWGKGRYGRLGHGDSDDQV---KPTIVTALQGYKVID---VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCK-VPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGTDDHVRRPRKVNALQGLKIVSIATGSLHCVACSDQGEVYTWGDNDEGQLG----------------DGTTRAQQ--------SPRLVLALQGKNTTRVSCGSAHTLAWSTTKAPHSL 4451          
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Match: A0A232FKZ7_9HYME (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Trichomalopsis sarcophagae TaxID=543379 RepID=A0A232FKZ7_9HYME)

HSP 1 Score: 155 bits (393), Expect = 1.220e-34
Identity = 118/398 (29.65%), Postives = 182/398 (45.73%), Query Frame = 0
Query:   84 EGSRI-----CSSIQPLPRAVSLDRYLKKGDAPAFAAAGANHSVLLTKEGKLFRWGVEDGDIYPFPAAV--CTQIPLPCVEVSCGRKHTMALMKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTVPEPAPVDLTDVPPSRMGEAPKVLCGRH--HSALVVSWGAMYSWGACSFGKLGLHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEGQGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCADGGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVNAPVLVRSLAPYRVLNVGCGGGHSLVVAVRRARNTL 472
            EG+++     C S+  L R + L      G      A  A+  V  T  G L R G    D    P  +     + +  V V+ G KH +AL   G V +WG G  G+LGHG+  +Y  P+L+  L    LG  +V +ACGG+HSA ++ AG +++WG  RYG+ G+G  D+ +    P  +T +   ++ +   V CG     +  V     ++SWG   +GKLG    D    VP ++   +   +++   G    VAL+R+  VY+WG G   + GHG+  H+R PR VSA +   +  +  G    +A +  G  Y+WG  D G  G                D  T  Q         +P LV +L    +  V CG  H+L  +  +A ++L
Sbjct: 2767 EGAKVKLPLPCESLSAL-RPIQL-----AGGEQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL----LGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL---KPTVVTALQGYKVID---VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCK-VPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG----------------DGTTHAQQ--------SPRLVHALQGKNITRVACGSAHTLAWSTTKATHSL 3123          
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Match: A0A7M7LUM6_NASVI (HECT-type E3 ubiquitin transferase n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7LUM6_NASVI)

HSP 1 Score: 155 bits (393), Expect = 1.320e-34
Identity = 118/398 (29.65%), Postives = 182/398 (45.73%), Query Frame = 0
Query:   84 EGSRI-----CSSIQPLPRAVSLDRYLKKGDAPAFAAAGANHSVLLTKEGKLFRWGVEDGDIYPFPAAV--CTQIPLPCVEVSCGRKHTMALMKGGFVMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTVPEPAPVDLTDVPPSRMGEAPKVLCGRH--HSALVVSWGAMYSWGACSFGKLGLHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEGQGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCADGGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVNAPVLVRSLAPYRVLNVGCGGGHSLVVAVRRARNTL 472
            EG+++     C S+  L R + L      G      A  A+  V  T  G L R G    D    P  +     + +  V V+ G KH +AL   G V +WG G  G+LGHG+  +Y  P+L+  L    LG  +V +ACGG+HSA ++ AG +++WG  RYG+ G+G  D+ +    P  +T +   ++ +   V CG     +  V     ++SWG   +GKLG    D    VP ++   +   +++   G    VAL+R+  VY+WG G   + GHG+  H+R PR VSA +   +  +  G    +A +  G  Y+WG  D G  G                D  T  Q         +P LV +L    +  V CG  H+L  +  +A ++L
Sbjct: 3913 EGAKVKLPLPCESLSAL-RPIQL-----AGGEQTLFAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL----LGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL---KPTVVTALQGYKVID---VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCK-VPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG----------------DGTTHAQQ--------SPRLVHALQGKNITRVACGSAHTLAWSTTKATHSL 4269          
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Match: A0A067K329_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067K329_JATCU)

HSP 1 Score: 148 bits (374), Expect = 1.330e-34
Identity = 113/364 (31.04%), Postives = 171/364 (46.98%), Query Frame = 0
Query:  115 AAGANHSVLLTKEGKLFRWGV-EDG-------DIYPFPAAVCTQIPLPCVEVSCGRKHTMALMKGGF-VMTWGTGYFGQLGHGDNASYRHPRLLRRLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTVPEPAPVDLTDVPPSRMGEAPKVLCGRHHSALVVSWGAMYSWGACSFGKLGLHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEGQGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCADGGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVN--APVLVRSLAPYRVLNVGCGGGHSLVVAVRR 467
            +AGA+HSV L     +  WG  EDG       D    P  + T      V V+CG  HT+A  +    V +WG G FG+LGHG+ +    P+ ++ L     G ++ Q+ACG  H   VT  G+V SWG N+ GQ G G+ ++++  P  +      P +M     V  G  H+A V   G +Y WG   +G LGL +    + VP +V+    + ++  A G  H +++S +  +Y++G+   GQ GHG       P  + A RD  ++QV  G   +MAVT DG  Y WG    G  G+                          G NV+  +PV+V+     +V+ + CG  H+L V  R+
Sbjct:   20 SAGASHSVALLSGNIVCSWGRGEDGQLGHGDADDRLSPTQLSTLDDHEIVSVTCGADHTIAYSEALMDVYSWGWGDFGRLGHGNCSDLFTPQPIKALH----GLKIKQIACGDSHCLAVTVEGQVQSWGRNQNGQLGLGTTEDSL-VPQRIGALQGIPIKM-----VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRMDRL-VPEKVSLTHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFADHLIPHQLEALRDSFISQVSGGWRHTMAVTSDGKLYGWGWNKFGQIGV--------------------------GDNVDHCSPVIVKFPHDQKVIKISCGWRHTLAVTERQ 346          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2C9URU1_MANES5.710e-3530.83Uncharacterized protein n=4 Tax=Crotonoideae TaxID... [more]
UPI000C71896F5.840e-3529.90E3 ubiquitin-protein ligase HERC2 n=1 Tax=Trichogr... [more]
A0A232FKZ7_9HYME1.220e-3429.65HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A7M7LUM6_NASVI1.320e-3429.65HECT-type E3 ubiquitin transferase n=1 Tax=Nasonia... [more]
A0A067K329_JATCU1.330e-3431.04Uncharacterized protein n=1 Tax=Jatropha curcas Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 174..188
score: 47.78
coord: 1..17
score: 38.24
coord: 158..174
score: 29.41
coord: 275..293
score: 37.72
coord: 334..355
score: 38.64
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 286..335
e-value: 5.1E-8
score: 33.4
coord: 340..387
e-value: 2.3E-6
score: 28.1
coord: 172..224
e-value: 4.2E-11
score: 43.3
coord: 228..281
e-value: 6.4E-11
score: 42.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 214..224
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 158..168
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 114..124
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 453..463
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 339..390
score: 12.353
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 228..285
score: 12.514
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 391..466
score: 10.243
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 172..227
score: 15.891
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 286..338
score: 14.323
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 892..968
e-value: 2.3E-8
score: 34.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 905..976
score: 13.257
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 846..990
e-value: 1.4E-16
score: 62.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 878..986
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 58..305
e-value: 8.6E-52
score: 178.2
coord: 306..467
e-value: 3.0E-26
score: 93.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 2..258
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 208..464
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 270..465
coord: 12..368
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 940..972
score: 9.564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:106996..145918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.501.1mRNA_F-serratus_M_contig105.501.1Fucus serratus malemRNAF-serratus_M_contig105 106996..146256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.501.1 ID=prot_F-serratus_M_contig105.501.1|Name=mRNA_F-serratus_M_contig105.501.1|organism=Fucus serratus male|type=polypeptide|length=991bp
MLLAFGVGFSYQLGHGDADSSTIGKQGEEGSASDEYWSTVAESLVALYRV
GRHQIRRRRRAARSSTSQGSAEHLCARIKGANREGSRICSSIQPLPRAVS
LDRYLKKGDAPAFAAAGANHSVLLTKEGKLFRWGVEDGDIYPFPAAVCTQ
IPLPCVEVSCGRKHTMALMKGGFVMTWGTGYFGQLGHGDNASYRHPRLLR
RLEPQRLGERVVQVACGGYHSAVVTDAGRVFSWGFNRYGQCGNGSKDNTV
PEPAPVDLTDVPPSRMGEAPKVLCGRHHSALVVSWGAMYSWGACSFGKLG
LHNPDKTVCVPREVTFFSDKPLLQAAAGDFHMVALSRTREVYSWGYGAEG
QGGHGSLLHMRTPRLVSAFRDIPVAQVVCGPWWSMAVTVDGYCYSWGCAD
GGWTGLERPVGLSVVEPGPSNDSATETQSFDSGHNVNAPVLVRSLAPYRV
LNVGCGGGHSLVVAVRRARNTLQDAARLVENGMRAGMAPPAPPAPHSTMK
GGRFSGDYGGGGNGGGGTATGRRGGESTAHSLGSSSAPVSSSSASSPPSS
CSQPLGGNHVVQPPQQQRAVATTETCGTTASPDLTSSTSESGWESGMVDE
VAAAAADAAAAAAAAAFNADSNRRYRGTSSEVTVSPRAKRDAAVRGRRGM
NSDLLLEKGTSTSMPKVPLPHQPPENAPEAGELPLTAATTPASSVELHGP
VDTGNGGGRSGSGGAALKRSSVSASVSNLNGSRSCPSPPTPRRGAPSPDE
SGQHPEVASPLVWAGKVAETASTARASNGGHVQTRVPDGGASPAAVEGVV
GGRHRRDREFHGRRQRSDVRGGVRKEGTVVGARGANVRPGDSGGSSRAIA
ATYGNDSTNRSAGRERSSGPDYVAKVFSYCRYGRLEQVGKELGAGFDVCR
QRDENGNTLLHCAAQNGLRCMCKTVLQEVGGKPLNLKNNRGNTALHYAYA
FGFHQLGKYLTMKGADDTLVNDQGLTCYEGLDRQDHLDSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR009091RCC1/BLIP-II
IPR002110Ankyrin_rpt