prot_F-serratus_M_contig105.499.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.499.1
Unique Nameprot_F-serratus_M_contig105.499.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1011
Homology
BLAST of mRNA_F-serratus_M_contig105.499.1 vs. uniprot
Match: A0A6H5JHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 1.250e-45
Identity = 272/823 (33.05%), Postives = 351/823 (42.65%), Query Frame = 0
Query:   19 VDADEVRLCDLGGKGWNQEDLENALGLWRRPVVLIAGRNSLDRLPKNTPCSIIYLDLSWNR---------------------------IAYLEGFAALPSLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTAADVRALSLNSAIRRLRIEGNPFCATGVKYGSYEIVMQHLLPSMSLLDDKPXXXXXXXXXXXXXVT---------------RALHRGVP------PPFNRTISRGGRLPV------GGSSD---DISMIRKWRDLSIVAADRKETIS--SHDQGGTPVAVIEKTWAR------------------SGSGGPTVNPGSYAEIFQESQRKK---RRGCSSSPGEAARSTATV----TTVTSRRGNRGTRNENRVAARRREATRVGNCAI-------TSI------GLRRRKPAGPEVGDHNIDGPGISARGAHGTVYSAPNSPASYHGLTRKERVAARRLAWNQGQGRDNLGSGMVQRRRMVS-RKTYVSSVRRNADARPSELTRLRGKRSNENPPFTARGHPSAGRQADGGVSMVTLRPGHNQVHAAGRRRSLVDGEGGSD----EGRSTGMVSHRSSSSKFNKNRLLASQ--GRSHEENISPVAKRSVKDP-RKPGAQQ----LVGRRNFSGLSSRRSGGAVAD----GSHGGGSSSTRTSNTPAASKVGQSRG----------VFQPFRITLGR-GGHRTPRPMAPHALRCTPRDDAKPWREGTSAWRGALDCERV--TDHEAKGLSRLHVTGEGEDKYAPLGQDESAGRGALPYADEKVDIYHK 715
             +  +V L DLG +   QEDLE AL LW RP +LIAGRNSLDRLP N P +I+YLDLSWNR                           +A LEGFAALP+LRE                            XXXXXXXXXXXXXXXXXXXXXXXLKT  DVRALSLN+A+RRLRIEGNP+C+TGV++G+Y+I +QHLLP M LLD KP             +                R   R +P      PP + +  R G   +        S D   D+S+ R+WRD ++         +  SH +      V     AR                  +G GGPTV PGSYAEIF  + RK+    R     P  AA +TA V    T   +++G  GT     VA  R++  + G+ A        TS+      G RR    G EV           A         A  S  SY GL+R ER AARR AW+Q +    +G G +Q +R    ++     V     AR        G RS E    +AR   S       G  M  +        A+ R      G GG      +G + G+    SSSSK  +   +  +   RS+  + +   +RS  D   KPGA +    +   R+    S+   G AV      G+  G    T  S     S+ G S G              FR TLGR G  + PRP AP A   TPR+DA+PW      W G  + +R    D E   +  +    + +D     G   S G+G          I H+
Sbjct:  137 ANPSDVLLVDLGSRLLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRRVRSRYILLGATQHFPCPPLCSHPNQRLASLEGFAALPNLRELDVSHNSVQDMLGLGSNVNLRVLRISYNXXXXXXXXXXXXXXXXXXXXXXXLKTKEDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMRLLDGKPPQVLSLSLSSTMPLXXXXXXXXXGKPADHHRHNSRRMPHRTSRGPPSSCSPDRRGSGSIREGFMAASSLDFVGDLSVERRWRDSAVAGKSLYPQFAPDSHQRAAASGGVRGGARARXXXXXXXXXGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKQGSTSRAVVDDP--AAFTTAGVSNSSTLAPTQKGVVGT-----VATERQQQQQPGHRAAAQASHGETSVAAAYRPGKRRIPAGGAEVXXXXXXXXXXXA---------ATASLLSYRGLSRAERGAARREAWSQARREGAVGDGKMQGQRASRWQRNIAPGVGGGGVARNKRAV---GVRSLEPTTRSARRRTSVS-----GSQMCRV------AAASSRHPRQASGTGGDQAFDTDGSAEGVGGGTSSSSKLGRGGAVGPRISVRSNSGSNARGGRRSGGDLWAKPGATRKPVSISNSRSRQTPSTASGGEAVTTRGRGGTRSGDGEKTARSALSKDSRAGGSGGGRPNGNDRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPW-----GWDGGKEGDRGHGEDDEDDEIRDVDAIAD-DDHVLGYGDGSSGGKGTFVSPLSTAGILHR 923          
BLAST of mRNA_F-serratus_M_contig105.499.1 vs. uniprot
Match: D8LKE3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE3_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 6.780e-43
Identity = 178/340 (52.35%), Postives = 206/340 (60.59%), Query Frame = 0
Query:   19 VDADEVRLCDLGGKGWNQEDLENALGLWRRPVVLIAGRNSLDRLPKNTPCSIIYLDLSWNRIAYLEGFAALPSLREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTAADVRALSLNSAIRRLRIEGNPFCATGVKYGSYEIVMQHLLPSMSLLDDKPXXXXXXXXXXXXXVT--------------------RALHR---GVPPPFNRTISRGGRLPVG----GSSD---DISMIRKWRDLSIVAADRKETISSHDQ--------GGTPVA-------------VIEKTWARSGSGGPTVNPGSYAEIFQESQRKK 307
             +  +V L DLG +   QEDLE AL LW RP +LIAGRNSLDRLP N P +I+YLDLSWNR+A LEGFAALP+LRE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LKT  DVRALSLN+A+RRLRIEGNP+C+TGV++G+Y+I +QHLLP MSLLD K              +                     R  HR   G P   +      G +  G     S D   D+S+ R+WRD S VA   + T  SH +        GG  V               I+ T   +G GGPTV PGSYAEIF    RK+
Sbjct:  111 ANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKAPPVLSLSLSSTMPLPXXXXXXXXGKPGDHHRHNSRRMPHRTSRGTPSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRD-SAVAGRSQFTPDSHQRAVARGGVRGGVRVRGGGDGNGGRGREPCIKVT---TGGGGPTVAPGSYAEIFVAGMRKE 446          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHT2_9PHAE1.250e-4533.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKE3_ECTSI6.780e-4352.35Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 90..103
e-value: 0.68
score: 10.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..112
score: 6.834
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 69..90
score: 7.281
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 135..156
score: 5.702
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 113..134
score: 7.496
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 55..200
e-value: 1.4E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 73..396
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 65..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:92200..96444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.499.1mRNA_F-serratus_M_contig105.499.1Fucus serratus malemRNAF-serratus_M_contig105 92098..97041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.499.1 ID=prot_F-serratus_M_contig105.499.1|Name=mRNA_F-serratus_M_contig105.499.1|organism=Fucus serratus male|type=polypeptide|length=1011bp
MAQLLNTTSRFGRPAALGVDADEVRLCDLGGKGWNQEDLENALGLWRRPV
VLIAGRNSLDRLPKNTPCSIIYLDLSWNRIAYLEGFAALPSLRELDLSHN
GVQGMVGLVSNTDLRVLRISHNCIRRVEGLHQMKRLQEADLSHNILKTAA
DVRALSLNSAIRRLRIEGNPFCATGVKYGSYEIVMQHLLPSMSLLDDKPP
PGLCNSPPPPPPVTRALHRGVPPPFNRTISRGGRLPVGGSSDDISMIRKW
RDLSIVAADRKETISSHDQGGTPVAVIEKTWARSGSGGPTVNPGSYAEIF
QESQRKKRRGCSSSPGEAARSTATVTTVTSRRGNRGTRNENRVAARRREA
TRVGNCAITSIGLRRRKPAGPEVGDHNIDGPGISARGAHGTVYSAPNSPA
SYHGLTRKERVAARRLAWNQGQGRDNLGSGMVQRRRMVSRKTYVSSVRRN
ADARPSELTRLRGKRSNENPPFTARGHPSAGRQADGGVSMVTLRPGHNQV
HAAGRRRSLVDGEGGSDEGRSTGMVSHRSSSSKFNKNRLLASQGRSHEEN
ISPVAKRSVKDPRKPGAQQLVGRRNFSGLSSRRSGGAVADGSHGGGSSST
RTSNTPAASKVGQSRGVFQPFRITLGRGGHRTPRPMAPHALRCTPRDDAK
PWREGTSAWRGALDCERVTDHEAKGLSRLHVTGEGEDKYAPLGQDESAGR
GALPYADEKVDIYHKYALNNGDYGDVADHTGDGNGDDGCGRGSYHSSGNS
SWDESPFASSLSTATLVQRVVSIRTSTTGAHEQPSTTAASRAGCIAATRT
SSASADQQRRAEGIARQSLGPRVSIAANDRRTKSGNGSAGGSIPYRVDAH
HIPDDLPGQEDTRRGQWRTDESLFPQHSSVVPHYSTENLGAGDRESHGMT
TLHVRPEIAMCAHELSGWPDARNPIGTKPPISSQRQHWNAQARGLRRPPP
APQPPSPPRRAPIYNASKEGDRTTSTRGSGADCDAADTTRDYYHICSSEP
KIMWPVQRAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf