prot_F-serratus_M_contig1043.446.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1043.446.1
Unique Nameprot_F-serratus_M_contig1043.446.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length334
Homology
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: D8LHG5_ECTSI (DNA primase large subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHG5_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 2.070e-165
Identity = 231/283 (81.63%), Postives = 249/283 (87.99%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMDISTDGVGNHPNAWMHASMEFHRAKAGAKTSPPGAPGTQSSPA 281
            VY+EGGFAYVPVQRV+TIVV+R+RM +S+SL+EASNHFAYVTSD+RFGPLLQNMSKQYLGRDFG GDG D D I PGM++SLA+RSMPLCMK LH ALNREHKLKHWGRLQYGLFLKGAGL V+DAM FWQ +FTK+MGLDQFQKQYAYNVRHMYGKEGKRTNYTP  CLKIIMGNPP  GDHHGCPYRH+D DHLSSLLSQVRI   DK AILR VKSKNYQLACQRHFEATH G+EA  +STDGVGNHPNAWMHASMEFH+ KA       GA G QSSPA
Sbjct:  199 VYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSDSRFGPLLQNMSKQYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFLKGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGNPPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKGYEASGVSTDGVGNHPNAWMHASMEFHKEKAA------GASGAQSSPA 475          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A835YS26_9STRA (DNA primase large subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS26_9STRA)

HSP 1 Score: 378 bits (970), Expect = 1.480e-125
Identity = 181/267 (67.79%), Postives = 209/267 (78.28%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMDISTDGVGNHPNAWMHASMEFHRAKAG 265
            VY+EGG+AYVPVQRV+ IVV+RFR A+SRSL EAS  F  VT D RFGPLLQNMS+QY+GRDFGG      D I P  +D++A RSMPLCM+ LH AL R+HKLKH GRLQYGLFLKGAGL +EDA  FWQ  FT+VM +D F K YAYNVRHMYGKEGKRTNYTP  CLKIIMG  PG G+HHGCPYRHFD  HLS+L  Q+++   D+ A+  HVK +NYQLACQRHFEATH G+E   +S DGVGNHPNAW  ASM++ +AK G
Sbjct:  196 VYLEGGYAYVPVQRVVAIVVARFRAALSRSLAEASGAFPAVTGDPRFGPLLQNMSRQYVGRDFGGXXXXXXDAIRPEHLDAMAARSMPLCMRGLHLALRRDHKLKHMGRLQYGLFLKGAGLSMEDAAAFWQSEFTRVMSVDAFTKGYAYNVRHMYGKEGKRTNYTPYSCLKIIMGAAPGAGEHHGCPYRHFDESHLSALFGQLKLERADRDAMAAHVKGRNYQLACQRHFEATHRGYEDAGVSADGVGNHPNAWTAASMQYWKAKEG 462          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A7S3H234_9STRA (DNA primase large subunit n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H234_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.750e-100
Identity = 151/268 (56.34%), Postives = 192/268 (71.64%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGH-EAMDISTDGVGNHPNAWMHASMEFHRAKAG 265
            VY+E GFAYVP+QR+++I+V+RFRM +SR+L EA+N F  V SD R GPLL+NM+KQ++G DF   +    D+++P  ++  A+ +MPLCMK+LH  L REHKLKHWGRLQYGLFLKGAGL +E A  FW+  FTK++  DQF K YAY+ RHMYGKEG R NYTP  C+KIIMG PP  G  HGCPYRH   + LSSLLS +++   D S I    KS NYQ+ACQRHF+ TH GH    ++ +D V NHPN W   S+ +H+ K G
Sbjct:  197 VYLEKGFAYVPLQRLVSIIVTRFRMQLSRALAEAANSFDIVGSDHRIGPLLKNMNKQFIGNDFTKTN-QSIDKLSPDKIELAAEVNMPLCMKNLHSNLKREHKLKHWGRLQYGLFLKGAGLDLEGAQQFWESHFTKLISHDQFVKSYAYSFRHMYGKEGARKNYTPYSCMKIIMGTPPETGAFHGCPYRHMPDNQLSSLLSSLKLSTPDVSEIAALAKSSNYQIACQRHFDVTHPGHLNNPELKSDAVANHPNLWFQTSVNYHKLKNG 463          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: W7TRK8_9STRA (DNA primase large subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRK8_9STRA)

HSP 1 Score: 312 bits (800), Expect = 9.060e-100
Identity = 157/296 (53.04%), Postives = 210/296 (70.95%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMDISTDGVGNHPNAWMHASMEFHRAKAGAKTSPPGAPG--TQSSPAAEGPWSSTGSP 292
            V++EGGFAYVPV+R+++I+V+RFR ++SR L+EA     YV +D R  PL+ NM+KQY G+DF G    DS  +    +D LADRSMP+CM+ LHK L  EHKLKHWGRLQYGLFLKGAG+G+EDA+ FW+  FTK+M  D F KQYAY++RH +GKEGKR +YTP  C KII+G  PG G+ HGCP+RH+D  +L+ LL +  +   D+  +++  K ++YQLAC +HFE TH G E++ IS DGVGNHPNA+  ASM F++ K G      G+P   +Q+S ++ GP    G P
Sbjct:  203 VFLEGGFAYVPVERLVSIIVARFRSSLSRGLLEAFGAMPYVLTDGRIAPLVSNMAKQYTGKDFSGTKTGDSLDLND--LDMLADRSMPMCMRVLHKNLRLEHKLKHWGRLQYGLFLKGAGIGMEDAIQFWEKEFTKIMTTDVFNKQYAYSIRHYFGKEGKRKDYTPFNCSKIILGPGPGHGEFHGCPFRHYDEANLNKLLERAGVGAMDRDEMIKLSKGQHYQLACMKHFETTHKGAESL-ISMDGVGNHPNAFFAASMAFYKEKNGEGGRRGGSPNPSSQTSASSAGPGEDAGDP 495          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A7S4A6J1_9STRA (DNA primase large subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J1_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.640e-95
Identity = 146/267 (54.68%), Postives = 188/267 (70.41%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATH----TGHEAMDISTDGVGNHPNAWMHASMEFHR 261
            VY+E G+AYVP  ++ +IVVSRFR ++SRSL +AS   A   +D R GPLL N+ K  L R     D  D + ITP  +D+LAD+SMPLCM+ LH AL R+HKLKHWGR QYGLFLK AGL +ED + F+Q  FTK+M  DQF K+YAYN+RH YGKEGKRT Y+P  C K++M   PGPG++HGCPYRHFD DHL+++LS+  +   ++S +L   K +NYQ+ACQRHFE  H       + +  + DGVGNHPNAW  AS  +H+
Sbjct:  193 VYLEKGYAYVPQAKLHSIVVSRFRASLSRSLAKASGSLAAAAADPRLGPLLTNVEKHDLERQDVDDD--DIEGITPEQIDALADQSMPLCMQQLHYALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTHDQFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLVMDMAPGPGEYHGCPYRHFDADHLAAVLSKTSLDAGEQSLVLGKAKERNYQIACQRHFEFAHKKQTVNGKKVVANLDGVGNHPNAWFKASRVYHQ 457          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: F0YER9_AURAN (DNA primase large subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER9_AURAN)

HSP 1 Score: 300 bits (769), Expect = 1.740e-95
Identity = 146/265 (55.09%), Postives = 184/265 (69.43%), Query Frame = 0
Query:    1 VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPLLQNMSKQYL--GRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMDISTDGVGNHPNAWMHASMEFHR 261
            VY+E G+AYVP  ++  IVV+RFR A+SRSL +AS+  A    D R  PLL N+ K  L  G+D    +  D + I P  +D+LA +SMPLCM+ LH AL R+HKLKHWGR QYGLFLK AGL +ED + F+Q  FTK+M +D F K+YAYN+RH YGKEGKRT Y+P  C K+IM   PGPG++HGCPY+H+D DHL+S+L  + I  +   AIL   KSKNYQLACQ+HFE TH     +    DGVGNHPNAW  AS  +H+
Sbjct:  193 VYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAAGDPRLSPLLNNIEKHDLSNGKDL---EDDDVEGIHPEQIDALAKQSMPLCMQQLHGALKRDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEGKRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKSKNYQLACQKHFEVTHPKAAGVAARPDGVGNHPNAWFKASRIYHK 454          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A7S1ZF14_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZF14_9STRA)

HSP 1 Score: 295 bits (754), Expect = 6.120e-93
Identity = 140/268 (52.24%), Postives = 196/268 (73.13%), Query Frame = 0
Query:    2 YVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDT-RFGPLLQNMSKQYLGRDFGGGDGA-DSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRI-VGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMD-ISTDGVGNHPNAWMHASMEFHRAK 263
            YV  G AYVP  R+++I+V+++RMA+S+SL+ A+  F  VT +  R  PLL++M+ QYLGRD+G  D   ++D +T   VDS A +SMPLCM  LH  + R+ KLKH GRLQYGLFLKG G+  E+ + F+Q +FTK+M  +QF K Y+YN+RHM+G+EGKR +Y+P  C+KII+GNPP  G+ HGCP+RH+D   LSSLL+++ +    D+SAIL   K++NYQLAC +HFE  H G  +++ +S +GVGNHPNAW  AS+ +H+AK
Sbjct:  226 YVHDGMAYVPQSRMVSIIVAKYRMALSKSLVRAALSFGEVTEENERIAPLLKSMNSQYLGRDYGKEDTPLENDELTANTVDSYAKQSMPLCMSQLHAGMKRDSKLKHQGRLQYGLFLKGGGMSTEEHLAFFQRVFTKIMTTEQFNKNYSYNIRHMHGQEGKRASYSPYSCMKIILGNPPQGGESHGCPFRHYDDSSLSSLLTKLNVGSASDRSAILAQKKARNYQLACAKHFEVMHPGAASVEGLSMNGVGNHPNAWFAASVGYHKAK 493          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A7S2UM83_9STRA (DNA primase large subunit n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM83_9STRA)

HSP 1 Score: 286 bits (733), Expect = 7.480e-90
Identity = 140/269 (52.04%), Postives = 191/269 (71.00%), Query Frame = 0
Query:    2 YVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDT-RFGPLLQNMSKQYLGRD-FGGGDG-ADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQVRI-VGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMD-ISTDGVGNHPNAWMHASMEFHRAK 263
            YVE G AYVP+ ++++IV ++F  A+S+SL  A   F+ VT++  R  PLL++M  QY  ++ +  G+G +D   +T   VD+ A +SMPLCM  LH  L ++HKLKHWGRLQYGLFLKGAG+ +E+++ F+Q  F K++  +QF K Y+YN+RHMYGKEGKR +YTP  C KII+GNPP  GDHHGCPYRH+D  HLSSLL+++ I    D+ AI+ H K++N QLAC RHFEA H    ++  ++ D VGNHPNAW   S+ +H AK
Sbjct:  213 YVEAGLAYVPLPKIVSIVTNKFTTALSKSLTNAGYAFSKVTNENGRINPLLKSMHSQYADKNRYTTGEGMSDGQELTSQNVDTYAAQSMPLCMSQLHSGLQQDHKLKHWGRLQYGLFLKGAGMTMEESLMFFQREFGKIITAEQFNKNYSYNIRHMYGKEGKRASYTPYNCTKIILGNPPQSGDHHGCPYRHYDDTHLSSLLTKMNIGTPADRDAIMSHKKAQNPQLACVRHFEAVHPAATSVKGVTLDNVGNHPNAWFAGSVSYHAAK 481          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: A0A7S2LEW2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LEW2_9STRA)

HSP 1 Score: 283 bits (724), Expect = 3.740e-88
Identity = 142/275 (51.64%), Postives = 197/275 (71.64%), Query Frame = 0
Query:    2 YVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSD--TRFGPLLQNMSKQYLG----RDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPG-DHHGCPYRHFDTDHLSSLLSQVRIVG-DDKSAILRHVKSKNYQLACQRHFEATHTGHEAMD-ISTDGVGNHPNAWMHASMEFHRAKAG 265
            YVE G AYVP+ R+++IV ++FR+A+S+SL  A+  F  V  D  +R GPLL++M+ QY G        G DG ++  +T   VD+LAD+SMPLCM+ LH+ L R+HKLKH GRLQ+GLFLKGAG+ +E+   F+Q  FT++M  +QF K Y+Y++RHM+GKEGKR +YTP  C+KII GNPP  G +HHGCPY+HFD  +LS+LL++++I    D+  I+ H K  N+QLAC +HFE +H    ++D ++ DGVGNHPNAW  AS+ +H AK G
Sbjct:  241 YVEKGQAYVPLARIVSIVAAKFRVALSKSLALAAGVFGQVAHDEASRIGPLLKSMNSQYTGPGAPNAVMGTDGENA--LTAATVDALADQSMPLCMQQLHQGLKRDHKLKHQGRLQFGLFLKGAGMSLEEHTLFFQREFTRIMTSEQFNKSYSYSIRHMHGKEGKRASYTPYNCMKIIFGNPPQSGVEHHGCPYKHFDDQNLSALLTKLKIGSVADRDVIMSHKKDGNFQLACAKHFEVSHPSATSVDGVNLDGVGNHPNAWFSASVSYHNAKNG 513          
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Match: K0RJG2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RJG2_THAOC)

HSP 1 Score: 278 bits (710), Expect = 2.230e-87
Identity = 141/274 (51.46%), Postives = 196/274 (71.53%), Query Frame = 0
Query:    2 YVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSD--TRFGPLLQNMSKQYLGRDFGGGD-GADSDRI-TPGMVDSLADRSMPLCMKHLHKALNREHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYNVRHMYGKEGKRTNYTP--CLKIIMGNPPGPG-DHHGCPYRHFDTDHLSSLLSQVRIVGD--DKSAILRHVKSKNYQLACQRHFEATHT-GHEAMDISTDGVGNHPNAWMHASMEFHRAKAG 265
            YVE GFA+VP+ R+++IVV++FR+++S+S+  A   F  V  +  TR GPLL++M+ QY G        G D +R+ T   VD LA +SMPLCM+ LH  L R+HKLKH GRLQ+GLFLKG+G+ +E+   F+Q  FT++M  +QF KQY+Y++RHM+GKEGKR +YTP  C+KIIMGNPP  G +HHGCPY+H+D  +LS+LL +++I GD  D+ AI+R  K  N+QLAC + FE  H        ++ DGVGNHPNAW +AS+ +H+AK+G
Sbjct:  137 YVEDGFAFVPLTRIVSIVVAKFRVSLSKSMALAVGAFGQVAHEESTRIGPLLKSMNSQYTGPSTPDAMVGLDGERVLTAATVDGLAAQSMPLCMQQLHTGLKRDHKLKHQGRLQFGLFLKGSGMSLEEHTLFFQREFTRIMTSEQFNKQYSYSIRHMHGKEGKRASYTPYNCMKIIMGNPPQSGVEHHGCPYKHYDDQNLSALLGKLKI-GDSADRDAIMRLKKEGNFQLACAKQFEVQHPLASTVAGVNMDGVGNHPNAWFNASVSYHQAKSG 409          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1043.446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHG5_ECTSI2.070e-16581.63DNA primase large subunit n=2 Tax=Ectocarpus TaxID... [more]
A0A835YS26_9STRA1.480e-12567.79DNA primase large subunit n=1 Tax=Tribonema minus ... [more]
A0A7S3H234_9STRA1.750e-10056.34DNA primase large subunit n=2 Tax=Spumella elongat... [more]
W7TRK8_9STRA9.060e-10053.04DNA primase large subunit n=2 Tax=Monodopsidaceae ... [more]
A0A7S4A6J1_9STRA1.640e-9554.68DNA primase large subunit n=1 Tax=Pelagomonas calc... [more]
F0YER9_AURAN1.740e-9555.09DNA primase large subunit n=1 Tax=Aureococcus anop... [more]
A0A7S1ZF14_9STRA6.120e-9352.24Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2UM83_9STRA7.480e-9052.04DNA primase large subunit n=2 Tax=Attheya septentr... [more]
A0A7S2LEW2_9STRA3.740e-8851.64Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RJG2_THAOC2.230e-8751.46Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.930.80coord: 1..54
e-value: 8.8E-9
score: 37.0
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 1..252
e-value: 1.5E-65
score: 221.3
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 1..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1043contigF-serratus_M_contig1043:138450..148313 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1043.446.1mRNA_F-serratus_M_contig1043.446.1Fucus serratus malemRNAF-serratus_M_contig1043 138449..148313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1043.446.1 ID=prot_F-serratus_M_contig1043.446.1|Name=mRNA_F-serratus_M_contig1043.446.1|organism=Fucus serratus male|type=polypeptide|length=334bp
VYVEGGFAYVPVQRVITIVVSRFRMAVSRSLIEASNHFAYVTSDTRFGPL
LQNMSKQYLGRDFGGGDGADSDRITPGMVDSLADRSMPLCMKHLHKALNR
EHKLKHWGRLQYGLFLKGAGLGVEDAMTFWQGIFTKVMGLDQFQKQYAYN
VRHMYGKEGKRTNYTPCLKIIMGNPPGPGDHHGCPYRHFDTDHLSSLLSQ
VRIVGDDKSAILRHVKSKNYQLACQRHFEATHTGHEAMDISTDGVGNHPN
AWMHASMEFHRAKAGAKTSPPGAPGTQSSPAAEGPWSSTGSPNGAPLPPS
PMDLGTPATPSAGKKSVGPVPSGYPTPSEGGGGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc