prot_F-serratus_M_contig1041.434.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1041.434.1
Unique Nameprot_F-serratus_M_contig1041.434.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length601
Homology
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Match: A0A2G5DSZ1_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DSZ1_AQUCA)

HSP 1 Score: 74.7 bits (182), Expect = 3.130e-11
Identity = 75/282 (26.60%), Postives = 119/282 (42.20%), Query Frame = 0
Query:    4 VLVVGSSGAGKRTLVQGLLRLLEMDGEQRVSLGTSVSSSDGGDIHNSTALAATTIRTPDRRVSIEQADAEFDAYKAFIRTKYYKAEVTLWRQAKASSILALRTVKLEG-LEGIVVVFDLREESSLEEAHQWAAFVDHKGEDLAFRLCVGTKLDLLQENDGPVE-----------NTPPFGAIESPGHGKESEKASTAGAATASVTASQGLQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLR---EKEGVPRVAEAFQSNVWTGMEFRTDSRPSALAAAGK 270
            VL+VGSS  GKRTL   L RLL++D E+     T V                                     Y   I TKYY A+V++W  A      ++ T+ +   L  +V+VFD+ + S+      +   +D +  ++   LC+G K+DLL  +   +E           ++ P       G   ESE +S  G         +   + RR CLEWC+ H  EY+EA   + E  + L    + +GV R+  A  +++W GM  ++ +  +     GK
Sbjct:   22 VLMVGSSNVGKRTL---LSRLLDVDFEEASDSLTEVL-----------------------------------CYGWTIDTKYYTADVSVW-MAHLVDGFSIGTLPMSNKLSALVLVFDMNQPSTFATLQDFVCQIDIQKFEIL--LCIGNKVDLLPGHPAHIEYRRLLQKRAESSSDPQPEFYDYGI-SESEGSSLLG-------GEEPSWDLRRSCLEWCIQHNIEYIEACASNSEFDKCLSVDGDSQGVERLYGALSAHMWPGMILKSGNMTAVPYPTGK 254          
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Match: A0A8B8NPA6_9MYRT (uncharacterized protein LOC115736304 isoform X1 n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8NPA6_9MYRT)

HSP 1 Score: 76.3 bits (186), Expect = 4.170e-11
Identity = 67/264 (25.38%), Postives = 112/264 (42.42%), Query Frame = 0
Query:    4 VLVVGSSGAGKRTLVQGLLRLLEMDGEQRVSLGTSVSSSDGGDIHNSTALAATTIRTPDRRVSIEQADAEFDAYKAFIRTKYYKAEVTLWRQAKASSILALRTVKLEGLEGIVVVFDLREESSLEEAHQWAAFVDHKGEDLAFRLCVGTKLDLLQENDGPVENTPPFGAIESPG---HGKESEKASTAGAATASVTASQGLQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLR---EKEGVPRVAEAFQSNVWTGMEFRTDSR 261
            + V+G SG GKRTL   L RLL +D E+            G D      +   TI T                       KYY A+V++W         A     L  L+ +V+VFDL +  SL     W +  D +  ++   LCVG K+DL+  +    E       +E      + + S+   +    ++ +   +   +  + CL+WC+DH  EY+EA   + +  + L    + +GV R++ A  S++W GM  ++  +
Sbjct:   17 IFVIGPSGVGKRTL---LSRLLSIDIEE------------GPDPSPDVVVQGWTINT-----------------------KYYSADVSVWMAHLRDDFDAQSLPILGKLDALVMVFDLSKPPSLAALQDWVSKNDIRNFEIL--LCVGNKVDLIPGHPVHAEYRRRLQNVEDDSVDYYAELSDCGISETEGSSLLGGDESTLQIGKSCLDWCIDHNIEYIEACASNADFDKCLSVAGDSQGVERLSVALSSHMWPGMILKSGEK 240          
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Match: A0A1S3Z9U5_TOBAC (uncharacterized protein LOC107784559 n=8 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z9U5_TOBAC)

HSP 1 Score: 75.1 bits (183), Expect = 9.810e-11
Identity = 67/221 (30.32%), Postives = 99/221 (44.80%), Query Frame = 0
Query:   63 RRVSIEQADAEFD------AYKAFIRTKYYKAEVTLWRQAKASSILALRTVKLEGLEGIVVVFDLREESSLEEAHQWAAFVDHKGEDLAFR--LCVGTKLDLLQENDGPVE-----------NTPPFGAIESPGHGKESEKASTAGAATASVTASQGLQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLR---EKEGVPRVAEAFQSNVWTGMEFRTDSR 261
            R +SI+  DA FD      AY   I TKYY A+V++W                + L  +V+VFD+ + SS      W +  D     L F   LC+G KLDLL  +   VE           +  P+  IE      E+E +S  G    S+       E ++ CL+WCL+H  EYVEA   + +  + L    + +GV R+  A  + +W GM  ++  R
Sbjct:   39 RLLSIDSEDA-FDSSSDILAYPWTINTKYYNADVSIWVAHLHEDFSIGALPAFDHLIALVLVFDISDLSSFVALKDWVSRTDI----LTFEILLCIGNKLDLLPGHSAHVEYRRRLLKSADSSGRPY--IELDSGISETEGSSLLGDDDTSL-------EYKKSCLDWCLEHNIEYVEACASNVDFDKCLSVDGDSQGVERLFGALSAYMWPGMILKSGDR 245          
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Match: A0A2G5DSZ3_AQUCA (Uncharacterized protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DSZ3_AQUCA)

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-10
Identity = 75/282 (26.60%), Postives = 119/282 (42.20%), Query Frame = 0
Query:    4 VLVVGSSGAGKRTLVQGLLRLLEMDGEQRVSLGTSVSSSDGGDIHNSTALAATTIRTPDRRVSIEQADAEFDAYKAFIRTKYYKAEVTLWRQAKASSILALRTVKLEG-LEGIVVVFDLREESSLEEAHQWAAFVDHKGEDLAFRLCVGTKLDLLQENDGPVE-----------NTPPFGAIESPGHGKESEKASTAGAATASVTASQGLQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLR---EKEGVPRVAEAFQSNVWTGMEFRTDSRPSALAAAGK 270
            VL+VGSS  GKRTL   L RLL++D E+     T V                                     Y   I TKYY A+V++W  A      ++ T+ +   L  +V+VFD+ + S+      +   +D +  ++   LC+G K+DLL  +   +E           ++ P       G   ESE +S  G         +   + RR CLEWC+ H  EY+EA   + E  + L    + +GV R+  A  +++W GM  ++ +  +     GK
Sbjct:   22 VLMVGSSNVGKRTL---LSRLLDVDFEEASDSLTEVL-----------------------------------CYGWTIDTKYYTADVSVW-MAHLVDGFSIGTLPMSNKLSALVLVFDMNQPSTFATLQDFVCQIDIQKFEIL--LCIGNKVDLLPGHPAHIEYRRLLQKRAESSSDPQPEFYDYGI-SESEGSSLLG-------GEEPSWDLRRSCLEWCIQHNIEYIEACASNSEFDKCLSVDGDSQGVERLYGALSAHMWPGMILKSGNMTAVPYPTGK 254          
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Match: A0A7J6X249_THATH (Gtp binding protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6X249_THATH)

HSP 1 Score: 74.3 bits (181), Expect = 1.840e-10
Identity = 77/271 (28.41%), Postives = 119/271 (43.91%), Query Frame = 0
Query:    4 VLVVGSSGAGKRTLVQGLLRLLEMDGEQRVSLGTSVSSSDGGDIHNSTALAATTIRTPDRRVSIEQADAEFDAYKAFIRTKYYKAEVTLWRQAKASSILALRTVKLEG-LEGIVVVFDLREESSLEEAHQWAAFVD-HKGEDLAFRLCVGTKLDLLQENDGPVE-----------NTPPFGAIESPGHGKESEKASTAGAATASVTASQGLQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLR---EKEGVPRVAEAFQSNVWTGMEFRT 258
            VL+VGS+  GKRTL   L RLL++D E+                                      + +E   Y   I TKYY A+V++W  A      ++ ++ +   L  +V+VFD+ E S+      + + +D HK E L   LC+G K+DLL  +   +E           ++ P       G   ESE +S  G     V  S  L   RR CLEWC+ H  EY+EA   + E  + L    + +GV R+  +  +++W GM  ++
Sbjct:   20 VLMVGSANVGKRTL---LSRLLDVDFEEA-----------------------------------SDSLSEVLCYGWTIDTKYYTADVSVW-MAHLVDGFSIGSLPISNKLSALVLVFDMNEPSTFATLQDFVSQIDIHKFEIL---LCIGNKVDLLPGHPAHIEYRRLLQKRAESSSDPHPEFFDYGI-SESEGSSLLG----DVEPSWDL---RRSCLEWCIQHNIEYIEACASNAEFDKCLSVDGDSQGVERLYGSLSAHMWLGMILKS 240          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1041.434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G5DSZ1_AQUCA3.130e-1126.60Uncharacterized protein n=1 Tax=Aquilegia coerulea... [more]
A0A8B8NPA6_9MYRT4.170e-1125.38uncharacterized protein LOC115736304 isoform X1 n=... [more]
A0A1S3Z9U5_TOBAC9.810e-1130.32uncharacterized protein LOC107784559 n=8 Tax=Nicot... [more]
A0A2G5DSZ3_AQUCA1.400e-1026.60Uncharacterized protein n=2 Tax=Aquilegia coerulea... [more]
A0A7J6X249_THATH1.840e-1028.41Gtp binding protein n=1 Tax=Thalictrum thalictroid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF10199Adaptin_bindingcoord: 235..582
e-value: 9.8E-8
score: 32.6
IPR001806Small GTPasePFAMPF00071Rascoord: 74..160
e-value: 4.5E-6
score: 26.4
IPR019341Alpha/gamma-adaptin-binding protein p34PANTHERPTHR14659FAMILY NOT NAMEDcoord: 3..595
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1041contigF-serratus_M_contig1041:43829..57599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1041.434.1mRNA_F-serratus_M_contig1041.434.1Fucus serratus malemRNAF-serratus_M_contig1041 43685..57654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1041.434.1 ID=prot_F-serratus_M_contig1041.434.1|Name=mRNA_F-serratus_M_contig1041.434.1|organism=Fucus serratus male|type=polypeptide|length=601bp
MSVVLVVGSSGAGKRTLVQGLLRLLEMDGEQRVSLGTSVSSSDGGDIHNS
TALAATTIRTPDRRVSIEQADAEFDAYKAFIRTKYYKAEVTLWRQAKASS
ILALRTVKLEGLEGIVVVFDLREESSLEEAHQWAAFVDHKGEDLAFRLCV
GTKLDLLQENDGPVENTPPFGAIESPGHGKESEKASTAGAATASVTASQG
LQERRRRCLEWCLDHGFEYVEADCLHPEIGRDLREKEGVPRVAEAFQSNV
WTGMEFRTDSRPSALAAAGKGRGLHVSGGGGDDEMGTGVVPESNGWSSEE
TDTEPRGSALDGEGEIVSEYLKGFLNPAEGSDEFGYGALGSDDEGEGGVD
GGAGGGGDGGEEQEPGGEGHTGGLEPRVSEEARSISARGSSQGSGIERGH
VELQAQWELLDQKPSRAAPEVDVFEPPGGRKDDGPAASPLSSHDKAGEDI
GNPEESRRGGDREEASPANLPCCASDGSVSVPSRGGGDLSGYGVPFGQVA
REDIEGRVDAVAGGVFDGVGGGKGRGEGKMASGLEESLLRAAGGEWEEDE
MEQLMSEVRKAKAAGDAVSDRERRARAANVAMRLAALLGEDSEDDEYASG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR019341Alpha/Gamma-adaptin-bd_p34
IPR027417P-loop_NTPase