prot_F-serratus_M_contig1040.426.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1040.426.1
Unique Nameprot_F-serratus_M_contig1040.426.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length321
Homology
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Match: B8BW57_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW57_THAPS)

HSP 1 Score: 157 bits (396), Expect = 2.630e-42
Identity = 110/311 (35.37%), Postives = 156/311 (50.16%), Query Frame = 0
Query:    9 VAGGICAAVSHTAAVPLDVIKTRMQCAEPGKYRGTWDAFVRICRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNGVAGGGSVAPTETPVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYAPGLRSGIARMISEEG-LSALTRALPAVLAKQIPYTVTKLVTFDIFVRAASRASLGHQSSGDGGGGVALTACCAVAAGMLSSLASQPGDTLLSTLNTEGRWREGQWGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTSIVTVQLLIYQTVKSMVGI 318
            +AGG+ AA+SH    PLDV+KTRMQ           +A ++I  +EG   L  G G TVVGY ++G LKFG +E LKP F SLF        +A GG   PTE       + A++ A  L S  L P+E  RIR+V D  +  GL  G+ +++ EEG L+   R +  + +KQIPYT+ K+ +FDIF        +G     +    + +    A  A +++ LASQPGD LL+                      G + +      M ++  E G    FRG  AR +HV  IVT QL+IY  +K  +G+
Sbjct:    1 IAGGVSAAISHGVTTPLDVVKTRMQTDPSLVNSSPQEAALQIIENEGPAALTVGLGPTVVGYGVEGALKFGVYESLKPMFLSLFH-------IANGGD--PTEP-----YLVAAICAGALASIILCPMEETRIRLVTDPSFGKGLIDGLPKLLKEEGALAPFQRGILPMFSKQIPYTMGKVTSFDIFAGMLYAGLVGFAFMSEKEIALEVEVGAAFLASIVACLASQPGDVLLTATYKNNN---------------GADDI-GFGSTMRKVYAEGGVGAFFRGLNARFLHVGCIVTFQLVIYDQIKQFLGL 281          
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Match: A0A7S0BY06_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY06_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.730e-42
Identity = 112/319 (35.11%), Postives = 162/319 (50.78%), Query Frame = 0
Query:    7 YFVAGGICAAVSHTAAVPLDVIKTRMQCAEPGKYRGT----WDAFVRICRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNGVAGGGSVAPTETPVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYAP-GLRSGIARMISEEGLSALTRALPAVLAKQIPYTVTKLVTFDIFVRAASRASLGHQSSGDGGGGVALTACCAVAAGMLSSLASQPGDTLLSTL--NTEGRWREGQWGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTSIVTVQLLIYQTVKSMVGI 318
            YFVAGG+CAA SH    P+DVIKTR+Q A+P K+ G      +A   + + EG  VL  G G TVVGY ++G +KFG +E++KP    L  G                      + I AS+ A  + +  L P+E+ RI++V D  YA  GL  G+ ++  EEGL +    + A+LAKQ+PYT+ K V+FD+ V     A+L             ++   A  A +L+ + SQPGD +L+     T G+                     S    +  I +E G  G F GT AR++HV  I+T QL+IY TVK ++G+
Sbjct:   58 YFVAGGVCAATSHGITTPIDVIKTRIQ-ADPSKFSGPNGGLKNAAALVVKEEGVGVLLGGLGPTVVGYGVEGAMKFGVYEIMKPIMKDLIRGSQ------------------AAAYIGASIIAGAVAAVLLCPMESCRIKIVTDPAYAGMGLMGGLPKLAREEGLLSTFGGIYAMLAKQVPYTIGKQVSFDV-VAGLLYAALAKIELSAVDFKFVISVLSAAIASVLACITSQPGDMILTKTYKTTTGK---------------------SFRNIIADIYKEGGLGGFFTGTGARIVHVGMIITSQLVIYDTVKQLLGL 335          
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Match: A0A7S2ETP5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETP5_TRICV)

HSP 1 Score: 157 bits (397), Expect = 6.370e-42
Identity = 110/316 (34.81%), Postives = 170/316 (53.80%), Query Frame = 0
Query:    7 YFVAGGICAAVSHTAAVPLDVIKTRMQCAEPGKY-RGTWDAFVRICRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNGVAGGGSVAPTETPVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYAP-GLRSGIARMISEEGLSALTRALPAVLAKQIPYTVTKLVTFDIFVRAASRASLGHQSSGDGGGGVA--LTACCAVAAGMLSSLASQPGDTLLSTLNTEGRWREGQWGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTSIVTVQLLIYQTVKSMVGI 318
            YFVAGG+CAA SH    P+DV+KTRMQ AEP  Y +G   A + I +++G   L  G G TV+GY ++G +KFG +E++KP F++L +                    +  + I ASV A  + S  L P+E+ARIRMV D DYA   + + + +++ ++GL++L   + A+L+KQ+PYT+ K V+FD+F +          S G+    +   ++ C A  A + + + SQPGD +L+              +G ++E G    V +V           G    F GT AR++HV  I+T QL+IY  VK  +G+
Sbjct:   51 YFVAGGVCAATSHGITTPVDVVKTRMQ-AEPEVYDKGMTSALLSILKTDGPSALLGGLGPTVIGYGIEGAMKFGVYEVMKPVFAALLSDN------------------IAVAYILASVVAGAVASILLCPMESARIRMVTDKDYAEESMVTVLPKLMKDDGLASLFGGIWAMLSKQVPYTMAKQVSFDVFAKLLYSLLSKPGSEGNTAADLKWIVSVCSAFIASIFACIFSQPGDMILTETY-----------KGSKNEGGFFGVVGTVYG-------RGGLPAFFTGTGARIVHVGLIITSQLVIYDIVKQALGL 329          
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Match: R7Q5H3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5H3_CHOCR)

HSP 1 Score: 159 bits (401), Expect = 6.910e-42
Identity = 112/324 (34.57%), Postives = 168/324 (51.85%), Query Frame = 0
Query:    7 YFVAGGICAAVSHTAAVPLDVIKTRMQCAEPGKYRGTWDAFVRICRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNGVAGGGSVAPTET--PVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYAPGLRSGIARMISEEGLSALTRALPAVLAKQIPYTVTKLVTFDI-------FVRAASRASLGHQSSGDGGGGVALTACCAVAAGMLSSLASQPGDTLLSTLNTEGRWREGQ---WGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTSIVTVQLLIYQTVKSMVGI 318
            +F+AGG+CA ++H A  P+DV+KTR+Q    G+Y G  DAF +I   EG   L  G   T  GY + G  K+ F+E+ K   S+                  PT    P L    AA   AE +  + L P+EA RIR VADS +  G+ +G++ ++  EGL    + LPA+L KQ+PYTV + V+F++       FVR   R   G ++        ++++   + AG+ +++ S PGDT+LS +N E    EG+   W Q                  +VR+AR AGF+GLF G  AR++ V+ ++  Q LIY ++K   GI
Sbjct:   85 FFLAGGVCAFLTHAACTPIDVVKTRIQTTS-GRYTGMLDAFRKIVAEEGPLTLLKGLAPTAGGYFLHGAFKYSFYEVFKVLLST-----------------DPTHALKPPLTIAAAAGFLAECIACTLLCPMEAIRIRAVADSAFPNGVFTGLSLLLKSEGLHGWYKGLPAMLMKQVPYTVGQFVSFELAVTLVKGFVRTVLRIE-GEEAF------ASISSIAGLLAGITAAIISHPGDTILSKINQE----EGEGSAWSQ------------------IVRVARTAGFAGLFLGLGARVVQVSCMIGGQFLIYDSIKLWCGI 361          
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Match: A0A7S3L234_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L234_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.810e-41
Identity = 118/318 (37.11%), Postives = 161/318 (50.63%), Query Frame = 0
Query:    5 WPYFVAGGICAAVSHTAAVPLDVIKTRMQCAEPGKYRGTWDAFVRICRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNGVAGGGSVAPTETPVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYAPG--LRSGIARMISEEGLSALTRALPAVLAKQIPYTVTKLVTFDIFVRAASRASLGHQSSGDGGGGVALTACCAVAAGMLSSLASQPGDTLLSTLNTEGRWREGQWGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTSIVTVQLLIYQTVKSMVGIAS 320
            W Y++AGG+CAAVSH   VP+DVIKTR Q            A  ++  +EG   LF G G TV GY ++G +KFG +E+LKP+ + L                    +  L     A+V+    G   L P+EA RIR+VA+  YA    +R G+ RM+  E  + LTR L  +L KQIPYT+TK V+FD   +        ++++    G + +    A AA +LS L+SQPGD LLS +N                 EG R +   V + +    R  G  G F G   R +HV  IVTVQLLIY  VK + GIA+
Sbjct:  249 WRYYLAGGVCAAVSHAIPVPIDVIKTRKQVDPLYCNLSMPQATRKLMETEGLSALFVGMGPTVWGYFLEGAVKFGVYEILKPWIALLLP-----------------NSQFLSFCACAAVSGLAAGIM-LCPMEALRIRLVAEPRYAAQGWIRGGL-RMLRAESGAGLTRGLTPMLYKQIPYTITKNVSFDFLTKFL------YKTTATSAGSLVIPFVAAAAASVLSCLSSQPGDMLLSVVNAH---------------EGERRRTRDVMKQIFHSDR--GVRGFFVGVKTRFLHVGMIVTVQLLIYDFVKRLAGIAA 524          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1040.426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B8BW57_THAPS2.630e-4235.37Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S0BY06_9STRA3.730e-4235.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2ETP5_TRICV6.370e-4234.81Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
R7Q5H3_CHOCR6.910e-4234.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3L234_9STRA1.810e-4137.11Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 7..20
score: 52.93
coord: 62..82
score: 31.15
coord: 222..244
score: 25.02
coord: 20..34
score: 36.61
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 114..197
e-value: 3.7E-8
score: 33.2
coord: 4..89
e-value: 3.1E-19
score: 68.7
coord: 218..316
e-value: 9.1E-10
score: 38.3
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 2..87
score: 22.663
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 112..197
score: 16.399
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 213..315
score: 16.571
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 2..316
e-value: 1.8E-45
score: 156.9
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 3..310
NoneNo IPR availablePANTHERPTHR45671FAMILY NOT NAMEDcoord: 5..318
NoneNo IPR availablePANTHERPTHR45671:SF19coord: 5..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1040contigF-serratus_M_contig1040:154907..158162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1040.426.1mRNA_F-serratus_M_contig1040.426.1Fucus serratus malemRNAF-serratus_M_contig1040 154907..158162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1040.426.1 ID=prot_F-serratus_M_contig1040.426.1|Name=mRNA_F-serratus_M_contig1040.426.1|organism=Fucus serratus male|type=polypeptide|length=321bp
LSSHWPYFVAGGICAAVSHTAAVPLDVIKTRMQCAEPGKYRGTWDAFVRI
CRSEGAQVLFCGAGATVVGYAMQGCLKFGFFELLKPFFSSLFAGGTWGNG
VAGGGSVAPTETPVLGSLIAASVAAEVLGSSALTPLEAARIRMVADSDYA
PGLRSGIARMISEEGLSALTRALPAVLAKQIPYTVTKLVTFDIFVRAASR
ASLGHQSSGDGGGGVALTACCAVAAGMLSSLASQPGDTLLSTLNTEGRWR
EGQWGQGKRSEEGGREKVESVARAMVRIAREAGFSGLFRGTAARMMHVTS
IVTVQLLIYQTVKSMVGIAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf