prot_F-serratus_M_contig1035.379.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1035.379.1
Unique Nameprot_F-serratus_M_contig1035.379.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length254
Homology
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BLAST of mRNA_F-serratus_M_contig1035.379.1 vs. uniprot
Match: D8LIB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB4_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 5.540e-106
Identity = 175/234 (74.79%), Postives = 194/234 (82.91%), Query Frame = 0 
Query:    6 NKGAA-ATTVYNPYKIFQAAQRCMGDPSVVAKVLVELLGDYAAPDVFMASTASVLSLYYSKGGLRKSSMTDFGKFAGELADELGKRDSPEAEDKMREAQSVYELFEEADTDGNGTISKQEFLNFGSKIGVSTEEEALXXXXXXXXXXXXXXXXXXXXQFCVPGVGRDKNGFNCAGHHGLRSYVAAADGVVCKWCEASSPKGSRMFGCRECDCDACLDCVIYHVKTCTTRIGCDR 238
            N+GAA A+TVY+PYKIFQAAQRCMGDPSVVAKVLVELLGD A PDV MAS ASVL +YY  GGLRK+SMTDFGKFAGELADELG R+S +AE+KM+EAQSVYELFEEADTD +GTISKQEF  FGS I VS++EEALXXXXXXXXXXXXXXX     QFCVPG GRD N FNCAG HGL+S  A AD   C WC +  P GSRMF CRECDCDACL+C I H+++C TRI C+R
Sbjct:    7 NRGAASASTVYDPYKIFQAAQRCMGDPSVVAKVLVELLGDCATPDVLMASAASVLEIYYGGGGLRKTSMTDFGKFAGELADELGARNSTQAEEKMKEAQSVYELFEEADTDNSGTISKQEFCVFGSNIDVSSDEEALXXXXXXXXXXXXXXXFLEWLQFCVPGPGRDPNSFNCAGQHGLQSCAAPADDTTCNWCGSKWPAGSRMFSCRECDCDACLECAILHLQSCDTRIFCER 240
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1035.379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIB4_ECTSI5.540e-10674.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 139..167
e-value: 1.6
score: 16.2
coord: 104..132
e-value: 8.7E-5
score: 31.9
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 105..164
e-value: 2.1E-10
score: 40.9
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 100..135
score: 12.589
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 137..170
score: 9.994
NoneNo IPR availableGENE3D1.10.238.10coord: 59..168
e-value: 5.4E-17
score: 64.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 148..160
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 113..125
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 102..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1035contigF-serratus_M_contig1035:152057..154567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1035.379.1mRNA_F-serratus_M_contig1035.379.1Fucus serratus malemRNAF-serratus_M_contig1035 139342..155480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1035.379.1 ID=prot_F-serratus_M_contig1035.379.1|Name=mRNA_F-serratus_M_contig1035.379.1|organism=Fucus serratus male|type=polypeptide|length=254bp
MSAFENKGAAATTVYNPYKIFQAAQRCMGDPSVVAKVLVELLGDYAAPDV
FMASTASVLSLYYSKGGLRKSSMTDFGKFAGELADELGKRDSPEAEDKMR
EAQSVYELFEEADTDGNGTISKQEFLNFGSKIGVSTEEEALELFFKVDTD
QNGVISFLEWLQFCVPGVGRDKNGFNCAGHHGLRSYVAAADGVVCKWCEA
SSPKGSRMFGCRECDCDACLDCVIYHVKTCTTRIGCDRVASSECALKFGS
LGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair