prot_F-serratus_M_contig1035.377.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1035.377.1
Unique Nameprot_F-serratus_M_contig1035.377.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length411
Homology
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Match: A0A1V9ZLA5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLA5_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.160e-20
Identity = 85/272 (31.25%), Postives = 121/272 (44.49%), Query Frame = 0
Query:   56 WNVLTGSLLETHPMKLVLSLAGVLGMGPAVEESLGHVGMAVFLVVVSLASGLVTSTGIFVAYIVTRLEYLLDLEIHGTFGLMAALAVAAAQHDPKSSFLANGRAPWFPMRYFPLV--LVTASATARAL---SLPMVSQDFPFVIVGAYSAWVYLRFFAHIVLGGPSGDISDEFRLVMFFPPML--------------HCVVKPVGDFTYGVFLLLGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKLLDEKFAKL 308
            W  LT      +  ++V  +     +G  VE+ LG + +A  ++ V + S  +    +F  YI+ R  + L   + G  G + AL VA  Q +P+         P  P++++PL+  LV    TA A+   S  ++    P+ + G Y  W YLRF  H    G  GD SD F L + FP  L                 V  +  FTY V  L+GFF+ R         DG       T ++       DPI ERR+ARAMK LDEK AKL
Sbjct:   53 WAYLTAPFYHQNLWEVVCVVPAAFLLGTRVEKHLGSLSLARMMLFVGVISTGLLFCDMFALYIIFRNPFFLKTGLSGFTGGLVALLVAVTQENPQQPLWI----PKVPVKHYPLMASLVCLGLTAGAVLTKSEILIMGAGPYAVSGMYLGWFYLRFL-HKNPDGSVGDTSDAFALTVLFPSFLKYTAAAVASSDTPARSTVSAIATFTYSVVKLMGFFKDR--------ADG-------TQSLPVVATSSDPITERRKARAMKALDEKLAKL 304          
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Match: A0A1V9Z0H2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z0H2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.070e-19
Identity = 81/262 (30.92%), Postives = 119/262 (45.42%), Query Frame = 0
Query:   56 WNVLTGSLLETHPMKLVLSLAGVLGMGPAVEESLGHVGMAVFLVVVSLASGLVTSTGIFVAYIVTRLEYLLDLEIHGTFGLMAALAVAAAQHDPKSSFLANGRAPWFP---MRYFPLVL------VTASATARALSLPMVSQDFPFVIVGAYSAWVYLRFFAHIVLGGPSGDISDEFRLVMFFPPMLHCVVKPVGDFTYGVFLLLGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKLLDEKFAKL 308
            W  LT      H  ++   +   L +G  VEE +G +  A  ++ V + +  +    +F  YI+ R  + L   + G  G + A+ VA  Q +P+ S        W P   ++ +PL++      +T  A +    + +V    P+ I G Y  W YLRF  H    G  GD S+ F L + FP  +   V  +  F Y V  L GFF+ R         DG      S++ I+      DPI ERR+ARAMK LDEK AKL
Sbjct:   49 WAYLTAPFYHQHLWEVACIVPITLVLGSRVEERIGSLSFARMMLFVGVITTGLLFCDMFCLYIIFRNPFFLKTGLSGFTGGVVAMLVAITQENPQQSL-------WIPKLAVKNYPLLVSLACLGLTIGAVSTKSDILIVGAG-PYAISGMYFGWYYLRFL-HKNPDGSYGDTSEAFSLTVLFPSFMKSTVGAISTFCYSVMKLGGFFKDRP--------DGT-----SSLPIVS--SSADPITERRKARAMKALDEKLAKL 286          
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Match: D8TYD4_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TYD4_VOLCA)

HSP 1 Score: 98.2 bits (243), Expect = 2.620e-19
Identity = 79/253 (31.23%), Postives = 117/253 (46.25%), Query Frame = 0
Query:   54 YFWNVLTGSLLETHPMKLVLSLAGVLGMGPAVEESLGHVGMAVFLVVVSLASGLVTSTGIFVAYIVTR-LEYLLDLEIHGTFGLMAALAVAAAQHDPKSSFLANGRAPWFPMRYFPLVLVTASATARALSLPMVSQDFPFVIVGAYSAWVYLRFFAHIVLGGPSGDISDEFRLVMFFPPMLHCVVKPVGDFTYGVFLLLGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKLLDEKF 305
            Y WN+ T  LL T+P+KL L +  VL +   VE   G      FL VV  +  L    G+++ + + +    +L ++  G  G++A L VA  Q  P+      G    F  +Y PL+ +T +  A A++   +S D PF+++G Y+AW+YLRFF         GD SD+F+   FFP  L  V+ P G     +F L         R PP+               LP     +  A RRR R  K L+E+ 
Sbjct:   43 YVWNLFTAGLLTTNPIKLGLEVIAVLLLTRLVEPVYGSKEFLKFLFVVDFSVSLCVLAGVYIIFAIGQDTGDILYIKFTGFHGILAGLVVAVKQVMPEHEAKLFGFVK-FTFKYLPLLFLTVTVGA-AVAFKQLS-DIPFLVLGTYNAWLYLRFFQQQPDSQHWGDSSDDFKFSGFFPAFLAPVIDPFGYVFATIFRL---------RHPPAETKAPFAKAAQYTLALP---ADNADANRRRERGAKALEERL 280          
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Match: W4HAT5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAT5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.720e-18
Identity = 67/189 (35.45%), Postives = 89/189 (47.09%), Query Frame = 0
Query:  130 IHGTFGLMAALAVAAAQHDPKSSFLANGRAPWFPMRYFPLVLVTASATARALSLPMVSQDF------PFVIVGAYSAWVYLRFFAHIVLGGPSGDISDEFRLVMFFPPMLHCVVKPVGDFTYGVFLLLGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKLLDEKFAKLNAKP 312
            + G  G + A+ VA  + +P          P  P RY+PL+L T    A ++   +   +       P+ + G Y  WVYLRF A     G  GD SD F L + FP  L   + P+ DF + V  L GFFQ R+         GH     S++A        DP+ ERR+ARAMK LDEK AKL   P
Sbjct:   95 VSGFTGGLVAMLVALVKENPVQPL----GIPKLPCRYYPLLL-TVLCVAMSVGAVLTKNEILIVGAGPYAVSGLYFGWVYLRFVAKNP-DGSVGDESDAFSLTVLFPAFLKPSLAPLFDFCFNVSKLCGFFQHRQ---------GHNATSGSSLAKAA--LASDPVTERRKARAMKALDEKLAKLAVMP 266          
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Match: A0A5D6Y2U9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2U9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.930e-17
Identity = 91/314 (28.98%), Postives = 136/314 (43.31%), Query Frame = 0
Query:   17 PTTVALLMVMVIL--AGAAALGARQA---LCLIWNHTFMTQFYFWNVLTGSLLETHPMKLVLSLAGVLGMGPAVEESLGHVGMAVFLVVVSLASGLVTSTGIFVAYIVTRLEYLLDLEIHGTFGLMAALAVAAAQHDPKSSFLANGRAPWFP---MRYFPLVLVTASA---------TARALSLPMVSQDFPFVIVGAYSAWVYLRFFAHIVLGGPSGDISDEFRLVMFFPPMLHCV-----VKPVGDFTYGVFLLLGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKLLDEKFAKL 308
            P T+ L++++ +L   G+A   A +A   L L      +     W  +T      H ++LV+ L    G+   VE  LG   +   L              +F   + +      +  + G  G + A+ VA  +  P ++      AP FP   +R++PLV  TA A         +A A+ + +V    PF  +G Y  W YLRF          GD+SDEF LV+  P  L  V     V PV +F + V  L G+ + R  +             PS++  +      DPIAERR+ARA+K LDEK AKL
Sbjct:    4 PATITLVLLLPLLWFFGSAFTPAGEAGGVLALSVADAILVHIRPWVYVTAGFYHPHLVQLVVVLPLAFGLAKRVEPELGAANLGRLL--------------LFANTMASFRSLPWNTSVSGFAGGITAMLVAFMRPTPHAT------APIFPGLKLRFYPLVATTAFALLSLLGLASSAPAVRVALVGGG-PFSALGGYFGWFYLRFLNRNA-DQSRGDVSDEFALVVLLPDALSYVTLSPIVGPVANFAFSVVKLCGYLKNRSDK-------------PSSLLPVVAETSDDPIAERRKARALKALDEKLAKL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1035.377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9ZLA5_9STRA2.160e-2031.25Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9Z0H2_9STRA1.070e-1930.92Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
D8TYD4_VOLCA2.620e-1931.23Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
W4HAT5_9STRA2.720e-1835.45Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A5D6Y2U9_9STRA3.930e-1728.98Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01160DUF1751_2coord: 46..146
e-value: 8.3E-15
score: 65.2
NoneNo IPR availablePANTHERPTHR13377:SF3TRANSMEMBRANE PROTEIN 115coord: 16..320
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..410
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 212..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 184..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 232..254
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 161..183
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
IPR013861TMEM115/Pdh1/Rbl19PFAMPF08551DUF1751coord: 52..146
e-value: 6.5E-14
score: 52.3
IPR013861TMEM115/Pdh1/Rbl19PANTHERPTHR13377PLACENTAL PROTEIN 6coord: 16..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1035contigF-serratus_M_contig1035:58678..82095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1035.377.1mRNA_F-serratus_M_contig1035.377.1Fucus serratus malemRNAF-serratus_M_contig1035 58574..83288 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1035.377.1 ID=prot_F-serratus_M_contig1035.377.1|Name=mRNA_F-serratus_M_contig1035.377.1|organism=Fucus serratus male|type=polypeptide|length=411bp
MSASSCFGTPLRVGSHPTTVALLMVMVILAGAAALGARQALCLIWNHTFM
TQFYFWNVLTGSLLETHPMKLVLSLAGVLGMGPAVEESLGHVGMAVFLVV
VSLASGLVTSTGIFVAYIVTRLEYLLDLEIHGTFGLMAALAVAAAQHDPK
SSFLANGRAPWFPMRYFPLVLVTASATARALSLPMVSQDFPFVIVGAYSA
WVYLRFFAHIVLGGPSGDISDEFRLVMFFPPMLHCVVKPVGDFTYGVFLL
LGFFQGREARVPPSAVDGHGGVDPSTVAILPPPERKDPIAERRRARAMKL
LDEKFAKLNAKPVNRWDDDEPWEAKQGGAVAEKKTPGIGLGVIKPATPKL
QAKISAPSRLPSGGDVDEDDWGMEDVEGEAEEAVVDEETGGGGGGGSGAT
GDNKSPEFSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013861TMEM115/Pdh1/Rbl19