prot_F-serratus_M_contig1025.318.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1025.318.1
Unique Name	prot_F-serratus_M_contig1025.318.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	199

Homology

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BLAST of mRNA_F-serratus_M_contig1025.318.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.270e-55
Identity = 88/128 (68.75%), Postives = 107/128 (83.59%), Query Frame = 0

Query:   72 TRSLLAKGAGVGDADEAVSSDG-KKRSSMSGVGGAGSNLLLILSGVLVMKGLLLPEDIRHLSFCPSEDPVRGRDTLPWRMMEESGRECGSIPEVMTKYVTAPLVFPGTPEWGMMLNVKEDVAKNAWLE 198
            T + L+  AG G A+E    DG    ++MSGVG  GSN+LL+++ V+V+KGLLLPE++RHL FCP+EDP+RGRDTLPWRMM ESGRECG+IPEVMTKYVTAPL FPGTPEWGMMLN KED+AK+AWL+
Sbjct:   83 TATALSARAGRG-AEEGGQEDGPSSAAAMSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1025.318.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1025.318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G453_ECTSI	1.270e-55	68.75	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..198
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..25
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.715

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1025	contig	F-serratus_M_contig1025:15228..25931 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1025.318.1	mRNA_F-serratus_M_contig1025.318.1	Fucus serratus male	mRNA	F-serratus_M_contig1025 14701..26013 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1025.318.1 ID=prot_F-serratus_M_contig1025.318.1|Name=mRNA_F-serratus_M_contig1025.318.1|organism=Fucus serratus male|type=polypeptide|length=199bp
MKILNAATWFMLVSSSVAGVAEAFAASGVGANARRVCGATWGGAAAASTN
SIDRRHEQSAWRYLRKVSPITTRSLLAKGAGVGDADEAVSSDGKKRSSMS
GVGGAGSNLLLILSGVLVMKGLLLPEDIRHLSFCPSEDPVRGRDTLPWRM
MEESGRECGSIPEVMTKYVTAPLVFPGTPEWGMMLNVKEDVAKNAWLE*