prot_F-serratus_M_contig1022.303.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1022.303.1
Unique Nameprot_F-serratus_M_contig1022.303.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length516
Homology
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BLAST of mRNA_F-serratus_M_contig1022.303.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 1.840e-36
Identity = 94/190 (49.47%), Postives = 118/190 (62.11%), Query Frame = 0 
Query:    1 MKDGRLARQKKAMLRARAQGAISDLEIHLEGATEDSCYRDEISRRGLTPADLDAVLEQSKMDGFKIVHHLHFADFSAHLADATIALQKEFDARTLPFESFVSWRNFVRICRDQPLLGDRPPSGEATGESDGLR---------RRGRPPTG------GRPPIPPPSALAGSGLRQRTLDGVLGITGRNGED 175
            MKDGRL RQKKAMLRA+++G  +++E+H+EG T D  + DEI RRGLTP DLD  L Q++  GFK+V H  FA FSA+LADAT +LQ +F+AR+L FESF +W+N +R  + Q  +   P S                    RRGRPPT       GRPP+   S  A  GLRQRTLDG  G+  R GED
Sbjct:  642 MKDGRLVRQKKAMLRAKSEGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFASFSAYLADATQSLQIQFEARSLDFESFFTWQNLIRFSKGQVPV--TPTSAXXXXXXXXXXXXXXXXXXXRRGRPPTSAVAGGCGRPPLA--SRPACGGLRQRTLDGAFGVA-RRGED 826
[Close]
BLAST of mRNA_F-serratus_M_contig1022.303.1 vs. uniprot
Match: D7FIK5_ECTSI (ERCC4 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK5_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 4.940e-36
Identity = 89/186 (47.85%), Postives = 114/186 (61.29%), Query Frame = 0 
Query:    1 MKDGRLARQKKAMLRARAQGAISDLEIHLEGATEDSCYRDEISRRGLTPADLDAVLEQSKMDGFKIVHHLHFADFSAHLADATIALQKEFDARTLPFESFVSWRNFVRICRDQPLLGDRPPSGEATGESDGLRRR-------GRPPTGGRPPIPPP----SALAGSGLRQRTLDGVLGITGRNGED 175
            MKDGRL RQKKAMLRA++ G  +++E+H+EG T D  + DEI RRGLTP DLD  L Q++  GFK+V H  FA FSA+LADAT +LQ++F+AR+L FESF +W+N +R  + Q  L  +  +                    GRPPT             S  AG GLRQRTLDGV G+  R+GED
Sbjct:    1 MKDGRLVRQKKAMLRAKSDGVAAEVEVHVEGDTADGRFVDEIYRRGLTPEDLDEALRQAETQGFKVVRHNDFAAFSAYLADATQSLQRQFEARSLDFESFFTWQNLIRFSKGQVPLTPKSAAXXXXXXXXXXXXXXXXXXXXGRPPTSAAAXXXXXXXXASRPAGDGLRQRTLDGVFGVA-RSGED 185
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1022.303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF35_9PHAE1.840e-3649.47ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FIK5_ECTSI4.940e-3647.85ERCC4 domain containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1022contigF-serratus_M_contig1022:137766..141061 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1022.303.1mRNA_F-serratus_M_contig1022.303.1Fucus serratus malemRNAF-serratus_M_contig1022 137246..147113 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1022.303.1 ID=prot_F-serratus_M_contig1022.303.1|Name=mRNA_F-serratus_M_contig1022.303.1|organism=Fucus serratus male|type=polypeptide|length=516bp
MKDGRLARQKKAMLRARAQGAISDLEIHLEGATEDSCYRDEISRRGLTPA
DLDAVLEQSKMDGFKIVHHLHFADFSAHLADATIALQKEFDARTLPFESF
VSWRNFVRICRDQPLLGDRPPSGEATGESDGLRRRGRPPTGGRPPIPPPS
ALAGSGLRQRTLDGVLGITGRNGEDNIGLSTTNSVNGGSGGSWPGKAVVG
GAGLSGTESSTLLEKAIEPGDDECCIVEAVLGGDSTPSSVPGAGGAESGR
IDGAASSSSPRVPASHRRRVLLGKRGIGDGREKSQQPTLGCAGSQSCGGR
DNSSGIHSSKRQRPSDGEDGGKLQASSTKRKARSLAFCDVGDKDGSCEGH
GGSSVARGCGGSKQPSRTRIPGMIYPCSAAPKASSSEAGGSSCMRHLAAL
PRNEGGATSVSNVDARHNNSSWGEVVDLSEDSPQQVPPLRLRCRALDRHR
LGIRSGSLGRRRDWVLAAEALRTTVLCLTCVPQTTIFPCRGARCGVATPV
AGGTPGNILPEIAMD*
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