prot_F-serratus_M_contig1020.286.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1020.286.1
Unique Nameprot_F-serratus_M_contig1020.286.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length379
Homology
BLAST of mRNA_F-serratus_M_contig1020.286.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.740e-13
Identity = 73/282 (25.89%), Postives = 121/282 (42.91%), Query Frame = 0
Query:    6 GDREGFREYSERAHNVVQDLRAQGSLAQIQPGLVDVVTHMQTIRLLMENYTSQKELQSFINTDLGPSPQVGDVVTLEQMLRFSIHAFRRRGQAFYAEASKSRDCYVVDVSPDDANMDASSMGE------RSRQIEHEL------GPI-YERLEDAIKRSTIGMGIGGLSINVPLIMMGIARQDWSGAADRASRVAEVLLRYPGLMRFEM-GMHACHLFLTILFVLKSS---QLFEKLRIAYNDHRSLGP-EVPSMEEWGRMKSNCSNRFCRASRQTILGRSL 269
            GD   F+EY   + + + D   +GS   +  G  +++ H QT+++   N  +      F+       PQ     T   + R+   +     Q  + +  ++    +  +S D+   D    G       ++ ++   +      G I +E L++A+ RS I  GIGGL IN+ L +    + D  GA +R     EV  RYPG+ R  M   H  H  L  L  +  S   +L+++LR  YN  RS      P +EEW  M + C +  CR     I  ++L
Sbjct:  244 GDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAA--YIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENS-ATIRPLSDDEPCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQAL 522          
BLAST of mRNA_F-serratus_M_contig1020.286.1 vs. uniprot
Match: D7FTD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD6_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.840e-6
Identity = 48/173 (27.75%), Postives = 73/173 (42.20%), Query Frame = 0
Query:   93 RRRGQAFYAEASKSRDCYVVDVSPDDANMDASSMGERSRQIEHELGPIYERLEDAIKRSTIGMGIGGLSINVPLIMMGIARQDWSGAADRASRVAEVLLRYPGLMRFEMGMHACHLFLTILFVLKSSQLFEKLRIAYNDHRSLGP-EVPSMEEWGRMKSNCSNRFCRASRQTI 264
            R RG+     AS   +  +VD   D+  +  S  G   ++   E  P   RL   ++RS +  G+GGL  +  +  M     D           A+++LRYPG++RF    H  H  L +    K   +++ +   YN  R  G    P  EEW  +   C N FCR+    I
Sbjct:  125 RVRGKGTRGPASDDNE--LVDSLHDEPEVPPS--GAAMKRFVQETLPEMTRLTKTLERSNVCSGVGGLFYHSNVAYMKTVNGDVEDLIKCLQASADIVLRYPGIVRFRP--HFIHCTLAVSHFSKRRDMYDAMNGVYNSIRPPGCWRAPPYEEWRTITQICDNMFCRSFEAEI 291          
BLAST of mRNA_F-serratus_M_contig1020.286.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 3.980e-5
Identity = 48/180 (26.67%), Postives = 73/180 (40.56%), Query Frame = 0
Query:  122 DASSMGERSRQIEHELGPIYERLEDAIKRSTIGMGIGGLSINVPLIMMGIARQDWSGAADRASRVAEVLLRYPGLMRFEMGMHACHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPSMEEWGRMKSNCSNRFCR---ASRQTILGRSLVQV----EPEFSGENSSAKTTSPESESD 293
            D    G   ++   E  P    L   ++ S    G+GG+  +  +  M     D   + +      +V+LRYPGL+RF    H  H  L          +++ +R  YN    +G P++P  EEW  ++  C +  CR   A R    G   VQ     E   + E S    TSP S +D
Sbjct:  474 DVPPTGPAMKRFAREALPEMTSLAKTLESSDTCSGVGGVLYHGNVAYMRAIAGDLDKSFESLQACVDVVLRYPGLVRFRS--HLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVMCRSMEAERLQRYGEGPVQTNAPSEEPVTSEPSPGSMTSPLSGAD 651          
BLAST of mRNA_F-serratus_M_contig1020.286.1 vs. uniprot
Match: D7FTD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD9_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 4.650e-5
Identity = 38/145 (26.21%), Postives = 60/145 (41.38%), Query Frame = 0
Query:  122 DASSMGERSRQIEHELGPIYERLEDAIKRSTIGMGIGGLSINVPLIMMGIARQDWSGAADRASRVAEVLLRYPGLMRFEMGMHACHLFLTILFVLKSSQLFEKLRIAYNDHRSLG-PEVPSMEEWGRMKSNCSNRFCRASRQTIL 265
            D    G   + +  E  P    L   ++ S    G GG+  +  +  M     D   A +      +V+LRYPGL+RF    H  H  L          +++ +R  YN    +G P++P  EEW  ++  C +  CR+    IL
Sbjct:  257 DVPPAGSAMKLLIREALPEMASLAKTLESSDTCSGAGGVLYHGNVAYMRAIAGDLDKAFESLQACVDVVLRYPGLVRFRS--HLIHCMLAASHFFNRRDMYDAMRGVYNSVGPMGYPQIPPYEEWRTIRQVCPHVLCRSMEAEIL 399          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1020.286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JBJ1_9PHAE1.740e-1325.89Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTD6_ECTSI1.840e-627.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTE0_ECTSI3.980e-526.67Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTD9_ECTSI4.650e-526.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..172
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1020contigF-serratus_M_contig1020:252511..256673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1020.286.1mRNA_F-serratus_M_contig1020.286.1Fucus serratus malemRNAF-serratus_M_contig1020 251840..280410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1020.286.1 ID=prot_F-serratus_M_contig1020.286.1|Name=mRNA_F-serratus_M_contig1020.286.1|organism=Fucus serratus male|type=polypeptide|length=379bp
MNALSGDREGFREYSERAHNVVQDLRAQGSLAQIQPGLVDVVTHMQTIRL
LMENYTSQKELQSFINTDLGPSPQVGDVVTLEQMLRFSIHAFRRRGQAFY
AEASKSRDCYVVDVSPDDANMDASSMGERSRQIEHELGPIYERLEDAIKR
STIGMGIGGLSINVPLIMMGIARQDWSGAADRASRVAEVLLRYPGLMRFE
MGMHACHLFLTILFVLKSSQLFEKLRIAYNDHRSLGPEVPSMEEWGRMKS
NCSNRFCRASRQTILGRSLVQVEPEFSGENSSAKTTSPESESDHSMMAQQ
LRMSRMPNVNRQEQLDYPVLKSDEPWFGLILDAGSDIIDQRILDGVNSAF
EPGEGLLDPEDWQIALDALTEEGAVDLA*
back to top