prot_F-serratus_M_contig102.268.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig102.268.1
Unique Nameprot_F-serratus_M_contig102.268.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length684
Homology
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Match: D0ND72_PHYIT (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=D0ND72_PHYIT)

HSP 1 Score: 240 bits (612), Expect = 5.140e-68
Identity = 130/344 (37.79%), Postives = 205/344 (59.59%), Query Frame = 0
Query:  288 IKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGPGGEHKC-LSWEELTCLKGDIAAIQKDLVTIEA-LTAQEENAEAD-----KMVGSLQNGAGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVVGRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSIR 624
            I+D RA  L +  ++D +  + + E FS H+G C ILG +   G      + +++G+ +R GSVG++V+EI TG  G +   LS  E+  L   +    + L  +++ +   +EN +A      K   SLQ  +   +    CY+C+D+ ++  NPL+APC+C GDT+Y+HLNCL++W+T   +N++C VL+    R C++CK+PY +  RLP G+ +SL    L PP I F VVT+H ++    ST+YQLS+  +M+       + L+VGRS QCD+VL YRTVST HA + +  G F+  D  SSNG+  Y+  PL L   +++ +K+G  V+S+K  + IR
Sbjct:   78 IEDPRAPCLNIDYSNDAYRLLPSSEKFSAHTGVCQILGTKCIRGG----KHRIRVGDIIRFGSVGLLVTEIDTGGIGPNDATLSPSEVNSLIQRVVCHDEALADVDSGMDTDDENGDASGNDESKPRSSLQRQSTSAI----CYVCYDETED-DNPLIAPCKCSGDTKYIHLNCLKRWNTNGEKNEICTVLDESNARTCSICKAPYPSKTRLPNGKVLSLLPDRLNPPCIMFQVVTKHSSSTLNLSTRYQLSYKMLMDND---IHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYSKGEFFLKDAGSSNGTLRYIYRPLTLHNNQSLHVKFGRTVLSIKPTKKIR 409          
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Match: A0A3F2RIP8_9STRA (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RIP8_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.110e-67
Identity = 131/344 (38.08%), Postives = 203/344 (59.01%), Query Frame = 0
Query:  288 IKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGPGGEH-KCLSWEELTCLKGDIAAIQKDLVTIEA-LTAQEENAEAD-----KMVGSLQNGAGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVVGRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSIR 624
            I+D RA  L +  ++D +  + + E FS H+G C ILG +   G      + +++G+ +R GSVG++V+EI TG  G +   LS  E+  L   +    + L  +++ +   +EN +A      K   SLQ  +   +    CY+C+D+  E  NPL+APC+C GDT+Y+HLNCL++W+T   +N++C VL+    R C++CK+PY +  RLP G+ +SL    L PP I F VVT+H +     ST+YQLS+  +M+       + L+VGRS QCD+VL YRTVST HA + +  G F+  D  SSNG+  Y+  PL L   +++ +K+G  V+S+K  + IR
Sbjct:   82 IEDPRAPCLNIDYSNDAYRLLPSSEKFSAHTGVCQILGTKCIRGG----KHRIRVGDIIRFGSVGLLVTEIDTGGVGPNDSTLSSSEVNSLIQRVVCHDEALADVDSGMDTDDENGDASGNDESKPRSSLQRQSTSAI----CYVCYDE-SEDDNPLIAPCKCSGDTKYIHLNCLKRWNTNGEKNEICTVLDESNARTCSICKAPYPSKTRLPNGKMLSLLPDRLNPPCIMFQVVTKHSSATLNLSTRYQLSYKMLMDND---IHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYAKGEFFLKDAGSSNGTLRYIYRPLTLHNNQSLHVKFGRTVLSIKPTKKIR 413          
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Match: A0A2P4X1K8_9STRA (E3 ubiquitin-protein ligase march6 n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4X1K8_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.130e-67
Identity = 131/344 (38.08%), Postives = 204/344 (59.30%), Query Frame = 0
Query:  288 IKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGPGGEHKC-LSWEELTCLKGDIAAIQKDLVTIEA-LTAQEENAEAD-----KMVGSLQNGAGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVVGRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSIR 624
            I+D RA  L +  ++D +  + + E FS H+G C ILG +   G      + +++G+ +R GSVG++V+EI TG  G +   LS  E+  L   +    + L  +++ +   +EN +A      K   SLQ  +   +    CY+C+D+  E  NPL+APC+C GDT+Y+HLNCL++W+T   +N++C VL+    R C++CK+PY +  RLP G+ +SL    L PP I F VVT+H ++    ST+YQLS+  +M+       + L+VGRS QCD+VL YRTVST HA + +  G F+  D  SSNG+  Y+  PL L   +++ +K+G  V+S+K  + IR
Sbjct:   77 IEDPRAPCLNIDYSNDAYRLLPSSEKFSAHTGVCQILGTKCIRGG----KHRVRVGDIIRFGSVGLLVTEIDTGGIGPNDATLSPSEVNSLIQRVVCHDEALADVDSGMDTDDENGDASGNDESKPRASLQRQSTSAI----CYVCYDE-SEDDNPLIAPCKCSGDTKYIHLNCLKRWNTNGEKNEICTVLDESNARTCSICKAPYPSKTRLPNGKVLSLLPDRLNPPCIMFQVVTKHSSSTLNLSTRYQLSYKMLMDND---IHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYSKGEFFLKDAGSSNGTLRYIYRPLTLHNNQSLHVKFGRTVLSIKPTKKIR 408          
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Match: A0A2D4C2I9_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2I9_PYTIN)

HSP 1 Score: 237 bits (605), Expect = 3.980e-67
Identity = 130/347 (37.46%), Postives = 203/347 (58.50%), Query Frame = 0
Query:  285 RHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHT-GPGGEHKCLSWEELTCLKGDIAAIQKDLVTIEA-LTAQEENAEAD-----KMVGSLQNGAGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVVGRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSIR 624
            R  I+D RA  L +  +++ +  + + E FS H+G C ILG +   G      + +K+G+ +R GSVG++V+EI T G G     LS  E+  L   +    + +  +++ L   ++N +A      K   SLQ  +   V    CY+C+D+  E  NPL++PC+C GDT+Y+HLNCL++W+T   +N++C VL+    R C++CK+PY +  +LP G+ +SL    L PP I F VVT+H ++    ST+YQLS+  ++        + L+VGRS QCD+VL YRTVST HA + +  G FY  D  SSNG+  Y+  PL L   +++ +K+G  V+S+K  + IR
Sbjct:   77 RIFIEDPRAPCLTIDYSNEAYRLMPSSEKFSAHTGVCQILGTKCIRGG----KHRIKVGDIIRFGSVGLLVTEIDTAGMGPNDASLSTAEIXSLIQRVICHDEAVADVDSGLDTDDDNGDASGNDESKPRASLQRQSTSAV----CYVCYDE-SEDDNPLISPCKCAGDTKYIHLNCLKRWNTNGEKNEICAVLDESNARTCSICKAPYPSKTKLPNGQYVSLMPDRLNPPSIMFQVVTKHSSSTLNLSTRYQLSYKMLLEND---IHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYAKGEFYIKDAGSSNGTLRYIYRPLTLQNNQSLHVKFGRTVLSIKPTKKIR 411          
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Match: A0A8K1CS87_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS87_PYTOL)

HSP 1 Score: 235 bits (599), Expect = 5.070e-66
Identity = 129/349 (36.96%), Postives = 199/349 (57.02%), Query Frame = 0
Query:  285 RHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHT-GPGGEHKCLSWEELTCLKGDIAAIQKDLVTIEALTAQEENAEADKMVGSLQNG--------AGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVVGRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSIR 624
            R  I+D RA  L +   ++ +  + + E FS H+G C ILG +   G      + +++G+ +R GSVG++V+EI T G G     LS  E+  L      IQ+ +   EA+   +   + D   G             A     + MCY+C+D+ +E  NPL++PC+C GDT+Y+HLNCL++W+T   +N++C VL+    R C++CK+PY +  RLP G+ +SL    L PP I F VVT+H ++    ST+YQLS+  ++        + L+VGRS QCD+VL YRTVST HA + +  G F+  D  SSNG+  Y+  PL L   +++ +K+G  V+S+K  + IR
Sbjct:   84 RIFIEDPRAPCLTIDYTNEAYRLMPSSEKFSAHTGVCQILGTKCIRGG----KHRIRVGDIIRFGSVGLLVTEIDTAGIGPNDATLSPSEINSL------IQRVICHDEAIADVDSGLDTDDDAGDASGNDESKPRASAQRQSTSAMCYVCYDESEEG-NPLISPCKCAGDTKYIHLNCLKRWNTNGEKNEICTVLDESNARTCSICKAPYPSKTRLPNGKFVSLLPDRLNPPTIMFQVVTKHSSSTLNLSTRYQLSYKMLLEND---IHRPLMVGRSSQCDLVLKYRTVSTIHAEIHYAKGEFFLKDAGSSNGTLRYIYRPLSLHNNQSLHVKFGRTVLSIKPTKKIR 418          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D0ND72_PHYIT5.140e-6837.79Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]
A0A3F2RIP8_9STRA1.110e-6738.08Uncharacterized protein n=7 Tax=Peronosporaceae Ta... [more]
A0A2P4X1K8_9STRA1.130e-6738.08E3 ubiquitin-protein ligase march6 n=3 Tax=Peronos... [more]
A0A2D4C2I9_PYTIN3.980e-6737.46Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A8K1CS87_PYTOL5.070e-6636.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 422..483
e-value: 5.0E-9
score: 46.0
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 423..469
e-value: 1.8E-10
score: 40.8
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 415..489
score: 16.829
IPR000253Forkhead-associated (FHA) domainSMARTSM00240FHA_2coord: 547..597
e-value: 0.0045
score: 26.2
IPR000253Forkhead-associated (FHA) domainPFAMPF00498FHAcoord: 549..592
e-value: 7.3E-10
score: 39.1
IPR000253Forkhead-associated (FHA) domainPROSITEPS50006FHA_DOMAINcoord: 548..592
score: 12.834
NoneNo IPR availableGENE3D2.60.200.20coord: 510..625
e-value: 8.5E-15
score: 56.5
NoneNo IPR availablePANTHERPTHR46210:SF2coord: 287..645
NoneNo IPR availablePANTHERPTHR46210FAMILY NOT NAMEDcoord: 287..645
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 419..487
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 416..494
e-value: 1.4E-14
score: 55.3
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 545..613

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:287034..296373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.268.1mRNA_F-serratus_M_contig102.268.1Fucus serratus malemRNAF-serratus_M_contig102 285795..296558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig102.268.1 ID=prot_F-serratus_M_contig102.268.1|Name=mRNA_F-serratus_M_contig102.268.1|organism=Fucus serratus male|type=polypeptide|length=684bp
MGNKAAGGPFQLEVPSGEAPGFQVGAMDGNARSEGCVLEVQQQGGAGEAS
DGSGDDERAYASPVEVEEELAAEEGTRTGAAISVAPASDERAEDSMNFTR
NNSQSSIGNSRPLESPDARVVALSLRASPHPEGPVIVAPATVDGRPIGRV
PPPLPPPMPSSVSAPAPASASPPRVPGTNDLKLPPLNDPHPLPLSEEPTR
LAVRGSPSSADGRDQKGAHVEVSVFKYQPGVQTPVEQLHTYRISSRGAAI
TGSLTHHEERRGENMSGSVDIATEYEKRKGSQVARHHIKDHRAKQLLVVP
NDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGS
VGVVVSEIHTGPGGEHKCLSWEELTCLKGDIAAIQKDLVTIEALTAQEEN
AEADKMVGSLQNGAGGIVNTRMCYMCFDDVDEASNPLVAPCECKGDTRYV
HLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISL
FQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKDLVV
GRSRQCDMVLDYRTVSTRHASVKFQGGRFYFSDLMSSNGSYLYLREPLQL
PYGETVFLKWGSNVVSLKAKRSIRHRLSNLVGRRTTATNKKDNPEQEFTM
LESLCEMGQSPSTEGAADGGVKAAISREGGPSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR000253FHA_dom
IPR013083Znf_RING/FYVE/PHD
IPR008984SMAD_FHA_dom_sf