prot_F-serratus_M_contig1013.223.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1013.223.1
Unique Nameprot_F-serratus_M_contig1013.223.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length275
Homology
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A1V9ZQM4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQM4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.260e-8
Identity = 47/123 (38.21%), Postives = 60/123 (48.78%), Query Frame = 0
Query:   11 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAI 133
            +K KV V FD + RK+YLTGF KRK+ RRRFG  M+  K +K  +                      L+S    A  +  A+ K  E V  ++ D HTQ  FG  VTVTT  G   SD ED +
Sbjct:    9 KKSKVIVSFDAEKRKEYLTGFSKRKLERRRFGHDMEAFKKQKALIEARKMRKAEQKKL---------LESLPEVAEVKVVAEDKDTEVV--EYNDEHTQGKFGHAVTVTTTVGELKSDSEDEL 120          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7S1Z7N9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7N9_TRICV)

HSP 1 Score: 62.0 bits (149), Expect = 1.180e-7
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
Query:   11 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERL 55
            R+ K+E+ FDPDARK+Y+TGF  RK  RR +GLAMQ++KDRK +L
Sbjct:    8 RRRKLEITFDPDARKEYVTGFASRKKERRAYGLAMQKVKDRKAKL 52          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A024TH86_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TH86_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.540e-7
Identity = 57/164 (34.76%), Postives = 73/164 (44.51%), Query Frame = 0
Query:    6 SKDGGRKPKVEVV--FDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQT------------------------MFGDTVTVTTVEGIPDSDDEDAIEMERLERELL 143
            +K GG KPK ++V  FD D RK+YLTGFHKRK  RRRFG  M+  K +K ++                L    D+          + A    D +V VD++D HTQ                          FGD VTVTT  G   SD ED ++ E  E +LL
Sbjct:    8 AKKGGGKPKSKLVVTFDADKRKEYLTGFHKRKQDRRRFGHDMEAFKKKKAQIEARKIRKAEQKELLASLPEVADV----------KHAATDGDAEV-VDYDDEHTQGPCSFLSSMHLRRRTRPPLGGLGVGKFGDVVTVTTSVGDLKSDSEDELDDE--ENDLL 158          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: K0S5F4_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5F4_THAOC)

HSP 1 Score: 61.6 bits (148), Expect = 1.710e-7
Identity = 42/132 (31.82%), Postives = 65/132 (49.24%), Query Frame = 0
Query:   11 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVD-------------FEDGHTQTMFGDTVTVTTVEGIPDSDD 129
            R  KVE+ F+P+ R+ YLTG   RK  RR FGLAMQ++KDR+ ++               +L   ED++      R  ++ + +A      +             F+D  T++ FG  V+VTT  G+P+ DD
Sbjct:   31 RHRKVEISFNPEDRRGYLTGLSARKKERRAFGLAMQKVKDRQAKIEERKEQRQA------QLEKIEDIERNKKALRRGQDGEVEAGSDAESESKLGXXXXXXXHTFQDDQTRSQFGGLVSVTTTYGMPEDDD 156          
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7R9WDE2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDE2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.650e-7
Identity = 70/175 (40.00%), Postives = 88/175 (50.29%), Query Frame = 0
Query:   14 KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXX---------------------------ELGVQEDLDSFDIKARAREEAKAKAD--------EQVRV-----DFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLEEKKR 148
            K+E+ FDP+AR++YLTGF  RK  RR FGLAMQ++KDRK RL   XXXXXXXXXXXX                           E        S D  A   + A+  AD        E+ R       FED  T+  FG +V VTT  G+P SDDED  + +R+ RE   + K+
Sbjct:   16 KLEITFDPNARREYLTGFSSRKRERRAFGLAMQKVKDRKARLKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEANAAVGKSSGDGAAATSDAAEVVADAARAVRNSEESRAASKTDTFEDVVTRDHFGGSVVVTTTFGVP-SDDEDDEDGDRMLRERSHKSKK 189          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9ZQM4_9STRA6.260e-838.21Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A7S1Z7N9_TRICV1.180e-762.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A024TH86_9STRA1.540e-734.76Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
K0S5F4_THAOC1.710e-731.82Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9WDE2_9STRA2.650e-740.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..155
NoneNo IPR availableCOILSCoilCoilcoord: 38..75
IPR019186Nucleolar protein 12PFAMPF09805Nop25coord: 12..109
e-value: 2.0E-15
score: 57.5
IPR019186Nucleolar protein 12PANTHERPTHR14577NUCLEOLAR PROTEIN 12coord: 3..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1013contigF-serratus_M_contig1013:243035..249663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1013.223.1mRNA_F-serratus_M_contig1013.223.1Fucus serratus malemRNAF-serratus_M_contig1013 242993..249897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1013.223.1 ID=prot_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=polypeptide|length=275bp
MGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKD
RKERLEERKERREAFKERREELGVQEDLDSFDIKARAREEAKAKADEQVR
VDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLEEKKRLR
AERVAGKGRGGGGRVYKPGKVGRGVAGSAEGTAEERWSLAAVSKRLAANM
PTKPRKGSTKRGGSSLGAETSLEKGKKKGKKGKKGTAAGAGGIAGAGAAS
ALVDKARGSLPRTELSKGKKRKKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019186Nucleolar_protein_12