prot_F-serratus_M_contig101.191.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig101.191.1
Unique Nameprot_F-serratus_M_contig101.191.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length134
Homology
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A448Z6E8_9STRA (Thioredoxin-like_fold domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6E8_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.340e-12
Identity = 40/112 (35.71%), Postives = 63/112 (56.25%), Query Frame = 0
Query:    4 DCVRFLPSLVKAYKGFE--AGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEG-DHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVM 112
            DCV   P +   +K  E  A   D+V+VSSD   +  +  ++      W ++ +E  + R+ LKK FG+CA  E+  LG+T   RKGGIPTL +    + V+++ DG+ D+M
Sbjct:   37 DCVESKPYVSNVFKMQEGRAKLFDLVYVSSDNDSDQMKGEIEGG----WDSIDYEKKEDRSMLKKCFGICAQKEMEALGITSEQRKGGIPTLLLIDKGNSVVISPDGIPDLM 144          
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: K3WAL0_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAL0_GLOUD)

HSP 1 Score: 68.9 bits (167), Expect = 4.540e-12
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 0
Query:    4 DCVRFLPSLVKAYKGFEAG--KVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMD 106
            DC  F P+L K Y+   AG  ++++VFVSSD S+E Q  ++++   P W ++ FE   R   K+++ V AG E++ +G+T   RK GIP L V + + +V+   D
Sbjct:   41 DCRGFQPTLNKFYERVNAGSKRLELVFVSSDGSQEAQAAHLKDKQGPWW-SIPFESPLRNEFKRKYAVAAGKELAEVGLTT--RKAGIPGLVVVQPNGDVIKLFD 142          
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A3R7H2J9_9STRA (Thioredoxin domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H2J9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 9.940e-12
Identity = 43/127 (33.86%), Postives = 68/127 (53.54%), Query Frame = 0
Query:    4 DCVRFLPSLVKAYKGFEAG--KVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWEAAASV 128
            DC  F P L + Y    A   ++DVVFVSSD +EE Q+ +  + H   W  +  E + R  L++++G+  G + + +G+T+  R  GIP L + R + EVL +  G   V + G  A+  W+  A V
Sbjct:   41 DCRAFQPKLNEFYTQVNASTQQLDVVFVSSDMTEETQQAHFSDKHGAWW-MIPREAEIRNELRRKYGIRNGKDDTEVGVTH--RNSGIPALVIIRPNGEVL-SFQGTQQVESDGIQALANWQTQAQV 163          
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A7J6MHM3_PEROL (Thioredoxin domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MHM3_PEROL)

HSP 1 Score: 70.9 bits (172), Expect = 1.180e-11
Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
Query:    5 CVRFLPSLVKAY---KGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSF-EGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVD-RW 122
            C +F P L + Y   K  +  K++++F+SSD+SEE Q  Y +E    +W  V + + + R  LKK FGVCAG E   LG+   + K GIP L V     + +   DGV+DV   G  AVD +W
Sbjct:  518 CRKFTPILKEFYEDVKEEDEDKLEIIFISSDKSEEEQVEYHKEEQ-GEWLRVPYGDVETRDALKKEFGVCAGIEKENLGIIN-NHKSGIPCLLVLDEDKKDVKIFDGVNDVKTMGPVAVDMKW 638          
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A7S2WUV8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUV8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.710e-11
Identity = 43/97 (44.33%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    5 CVRFLPSLVKAYKGFEAG-------KVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAV 94
            C  F P L + Y+   A         ++VVFVSSD+SE   R+YM E  H DW AV+F+   R +LKKR+G  AG E   LG     +K GIPTL V
Sbjct:  104 CRAFTPKLKEFYEKANARPGAGGRKNMEVVFVSSDKSEAGARQYM-EGMHGDWLAVAFDSPLRWSLKKRYGSWAGVEKKVLGGEENGKKSGIPTLIV 199          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A448Z6E8_9STRA1.340e-1235.71Thioredoxin-like_fold domain-containing protein n=... [more]
K3WAL0_GLOUD4.540e-1237.14Thioredoxin domain-containing protein n=1 Tax=Glob... [more]
A0A3R7H2J9_9STRA9.940e-1233.86Thioredoxin domain-containing protein n=3 Tax=Phyt... [more]
A0A7J6MHM3_PEROL1.180e-1139.02Thioredoxin domain-containing protein n=1 Tax=Perk... [more]
A0A7S2WUV8_9STRA2.710e-1144.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012336Thioredoxin-like foldPFAMPF13905Thioredoxin_8coord: 5..98
e-value: 5.1E-12
score: 45.9
NoneNo IPR availableGENE3D3.40.30.10coord: 3..124
e-value: 4.3E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR13871THIOREDOXINcoord: 4..122
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 5..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:84838..89037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.191.1mRNA_F-serratus_M_contig101.191.1Fucus serratus malemRNAF-serratus_M_contig101 84473..106405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig101.191.1 ID=prot_F-serratus_M_contig101.191.1|Name=mRNA_F-serratus_M_contig101.191.1|organism=Fucus serratus male|type=polypeptide|length=134bp
MGYDCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDW
PAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDE
VLLTMDGVDDVMAAGAGAVDRWEAAASVAAAKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012336Thioredoxin-like_fold
IPR036249Thioredoxin-like_sf