prot_F-serratus_M_contig101.191.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig101.191.1
Unique Name	prot_F-serratus_M_contig101.191.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	134

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: D7FN25_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN25_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 2.000e-63
Identity = 94/124 (75.81%), Postives = 113/124 (91.13%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWEAAAS 127
            DCVRF+PSLV+A+KGF+ G+ D+VF+SSDRSEELQRRYM+E  H DWPAV+F+G+HRA+LK+RFG CAG+EV+ LGM+ +DRKGGIPTLAVFRASD VLLTM+GVDDV  AGAGAVDRWEAAA+
Sbjct:   38 DCVRFVPSLVEAFKGFKPGQADIVFISSDRSEELQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMNGVDDVNQAGAGAVDRWEAAAN 161

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: G4YP28_PHYSP (Thioredoxin domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YP28_PHYSP)

HSP 1 Score: 87.8 bits (216), Expect = 2.130e-19
Identity = 53/120 (44.17%), Postives = 69/120 (57.50%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L   YK     ++DVVFV SD S + QR + ++   P W  V FEG+ R  LK++FGVCAGAEV  L  +   RKGGIPTL V R   EV+   D  D +   G  A+ +W+
Sbjct:   42 DCRAFQPALNSFYKAAR-DQIDVVFVGSDASAKDQRAHFEDKQGPWW-MVPFEGETRTQLKRKFGVCAGAEVRVL--SPITRKGGIPTLVVIRPDGEVV-DFDAADKIERDGIKALAKWQ 156

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: C5KGG7_PERM5 (Thioredoxin, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KGG7_PERM5)

HSP 1 Score: 87.4 bits (215), Expect = 3.760e-19
Identity = 49/123 (39.84%), Postives = 69/123 (56.10%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEA---GKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDH-RANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRW 122
            DC+ F P++ K Y+  +A    K++++FVSSD+SE  Q  Y +    PDW  V F     RA LKK +GVCA  E+  +G++ + RK GIPTL V   +   +   D   D+   G  AVDRW
Sbjct:   44 DCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQIAYHRNDM-PDWLRVPFNDKRTRATLKKEYGVCAKKEMEDIGISDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGEAAVDRW 165

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A7J6PHW4_PEROL (Thioredoxin domain-containing protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6PHW4_PEROL)

HSP 1 Score: 87.4 bits (215), Expect = 3.760e-19
Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEA---GKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDH-RANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRW 122
            DC+ F P++ K Y+  +A    K++++FVSSD+SE  Q  Y Q     DW  V +     RA LKK +GVCA  E+  +GM+ + RK GIPTL V   +   +   D   D+   GA AVDRW
Sbjct:   44 DCIAFTPTVKKFYEDVKAKNSDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRW 165

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: H3GMH0_PHYRM (Thioredoxin domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMH0_PHYRM)

HSP 1 Score: 85.1 bits (209), Expect = 2.390e-18
Identity = 54/120 (45.00%), Postives = 68/120 (56.67%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L   YK      +DVVFV SD S   Q  ++++   P W  V FEGD R+ LK++FGVCAGAEV  L  +   RKGGIPTL V RA  EV+      D V   G  A+ +W+
Sbjct:   42 DCRAFQPALNSFYKA-AGDDLDVVFVGSDASAADQLAHLKDKQGPWW-MVPFEGDTRSQLKRKFGVCAGAEVRAL--SPITRKGGIPTLVVIRADGEVV-DFHAADKVERDGIKALAKWQ 156

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A225WXI2_9STRA (Thioredoxin domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXI2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 9.720e-18
Identity = 52/120 (43.33%), Postives = 69/120 (57.50%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L   Y+    G VDVVFV SD S + Q  ++++     W  V F+G+ R  LK++FGVCAGAEV TL  +   RKGGIPTL V R   +V+   D  D V   G  A+ +W+
Sbjct:   42 DCRAFQPALNSFYQD-AGGDVDVVFVGSDASAKDQLAHLKDKQ-GSWWMVPFDGETRTQLKRKFGVCAGAEVRTL--SPITRKGGIPTLVVIRPDGKVV-DFDAADKVERDGIKALAKWQ 156

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A484E3N9_BRELC (Thioredoxin domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3N9_BRELC)

HSP 1 Score: 83.6 bits (205), Expect = 9.960e-18
Identity = 50/120 (41.67%), Postives = 69/120 (57.50%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L + Y+    GK+D+VFV SD S E Q  +  E     W A SFEG+ R  LK++FG+CA AEV  L      R+GGIPTL + R   E+L   DG++ +   G  A+ +W+
Sbjct:   42 DCRAFQPTLNRFYES-TGGKLDIVFVGSDASAEDQFTHFTEKQGSWWMA-SFEGEIRTQLKRKFGICASAEVDDL--YPITRQGGIPTLLIIRCDGEIL-DADGINSIKRDGFEALTKWQ 156

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A662XYU5_9STRA (Thioredoxin domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYU5_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.040e-17
Identity = 52/122 (42.62%), Postives = 66/122 (54.10%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGK--VDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L   YK   A +  +DVVF+ SD S   Q  + ++   P W  V FEGD R  LK+++GVCAGAEV  L      RKGGIPTL V R   EV+      D V   G  A+ +W+
Sbjct:   42 DCRGFQPALNSFYKAANASREQLDVVFIGSDASAADQLAHFKDKQGPWW-MVPFEGDVRTQLKRKYGVCAGAEVRAL--QPIKRKGGIPTLVVIRPDGEVV-DFQAADKVERDGVKALAKWQ 159

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A7J6LHT8_PEROL (Thioredoxin domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LHT8_PEROL)

HSP 1 Score: 83.2 bits (204), Expect = 1.480e-16
Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEA---GKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDH-RANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWEAAAS 127
            DC+ F P++ K Y+  +A    K++++FVSSD+SE  Q  Y Q     DW  V +     RA LKK +GVCA  E+  +GM+ + RK GIPTL V   +   +   D   D+   GA AVDR  A  S
Sbjct:   44 DCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRLFAVVS 170

[Close]

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Match: A0A2P4XKG1_9STRA (Thioredoxin domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKG1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.530e-16
Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 0

Query:    4 DCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDWPAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDEVLLTMDGVDDVMAAGAGAVDRWE 123
            DC  F P+L K Y    +  +DV+FV SD S + Q  + ++   P W  V FEG+ R  LK++FGVCAGAEV  L  +   RKGGIPT  V R   EV+   D V+ +   G  A+ +W+
Sbjct:   42 DCRAFQPALNKFYSE-ASDDLDVIFVGSDASAKDQLAHFKDKQGPWW-MVPFEGETRTQLKRKFGVCAGAEVREL--SPITRKGGIPTFVVIRPDGEVV-DFDAVNKIERDGIKALAKWQ 156

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig101.191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN25_ECTSI	2.000e-63	75.81	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
G4YP28_PHYSP	2.130e-19	44.17	Thioredoxin domain-containing protein n=4 Tax=Phyt...	[more]
C5KGG7_PERM5	3.760e-19	39.84	Thioredoxin, putative n=2 Tax=Perkinsus marinus (s...	[more]
A0A7J6PHW4_PEROL	3.760e-19	40.65	Thioredoxin domain-containing protein n=2 Tax=Perk...	[more]
H3GMH0_PHYRM	2.390e-18	45.00	Thioredoxin domain-containing protein n=1 Tax=Phyt...	[more]
A0A225WXI2_9STRA	9.720e-18	43.33	Thioredoxin domain-containing protein n=1 Tax=Phyt...	[more]
A0A484E3N9_BRELC	9.960e-18	41.67	Thioredoxin domain-containing protein n=2 Tax=Brem...	[more]
A0A662XYU5_9STRA	4.040e-17	42.62	Thioredoxin domain-containing protein n=2 Tax=Noth...	[more]
A0A7J6LHT8_PEROL	1.480e-16	39.84	Thioredoxin domain-containing protein n=3 Tax=Perk...	[more]
A0A2P4XKG1_9STRA	1.530e-16	41.67	Thioredoxin domain-containing protein n=1 Tax=Phyt...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012336	Thioredoxin-like fold	PFAM	PF13905	Thioredoxin_8	coord: 5..98 e-value: 5.1E-12 score: 45.9
None	No IPR available	GENE3D	3.40.30.10		coord: 3..124 e-value: 4.3E-16 score: 60.7
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 4..122
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 5..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig101	contig	F-serratus_M_contig101:84838..89037 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig101.191.1	mRNA_F-serratus_M_contig101.191.1	Fucus serratus male	mRNA	F-serratus_M_contig101 84473..106405 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig101.191.1 ID=prot_F-serratus_M_contig101.191.1|Name=mRNA_F-serratus_M_contig101.191.1|organism=Fucus serratus male|type=polypeptide|length=134bp
MGYDCVRFLPSLVKAYKGFEAGKVDVVFVSSDRSEELQRRYMQEAHHPDW
PAVSFEGDHRANLKKRFGVCAGAEVSTLGMTYADRKGGIPTLAVFRASDE
VLLTMDGVDDVMAAGAGAVDRWEAAASVAAAKT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR036249	Thioredoxin-like_sf