prot_F-serratus_M_contig101.189.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig101.189.1
Unique Nameprot_F-serratus_M_contig101.189.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length536
Homology
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BLAST of mRNA_F-serratus_M_contig101.189.1 vs. uniprot
Match: A0A7S4IDD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IDD1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.530e-7
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 0 
Query:  299 DICSETFRKAVAESMGATGIVIDEYRAKLDELAERLGLTVRSAKAMFHAAVRQRMGPMVQQIMYEFERSVLSKGEMARKTGKDSGADVL--GATG-GQLGI 396
            ++  E  +  V E  G  G+   E    L +L  RLG+T  +A+ ++ AAV++RM PMV+ ++ E ER++L + ++A+K  KD G DV   G +G G+LGI
Sbjct:    5 EVLGEFKKGVVLEEGGPRGVPRPESGEPLVDLRNRLGVTEDAARELYLAAVKERMVPMVEDLVLELERTMLDQQQLAQKRKKDFGEDVFKSGRSGSGKLGI 105
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A7S4IDD1_9STRA3.530e-737.62Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031610Protein TIC110, chloroplasticPFAMPF16940Tic110coord: 69..359
e-value: 8.9E-13
score: 47.6
IPR031610Protein TIC110, chloroplasticPANTHERPTHR34935FAMILY NOT NAMEDcoord: 70..359
NoneNo IPR availablePANTHERPTHR34935:SF3PROTEIN TIC110, CHLOROPLASTICcoord: 70..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig101contigF-serratus_M_contig101:18161..35750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig101.189.1mRNA_F-serratus_M_contig101.189.1Fucus serratus malemRNAF-serratus_M_contig101 6141..40905 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig101.189.1 ID=prot_F-serratus_M_contig101.189.1|Name=mRNA_F-serratus_M_contig101.189.1|organism=Fucus serratus male|type=polypeptide|length=536bp
MKLDPEDRQRINKLATAFELSGDEALEEYEAVVIPIYEELLVGCLSNIMG
DTSPSDLARTYGQLMMFTTDTQLRQETADQALKDIMTATLQDMFQDAAQF
VRVANQREAANSARGIVEFVQATLDMISINLQDDPDKHAAAFEKAVGGSI
VTIESAKDASGLYEMFLKSRFAQSEMSSKDQDSIALLAKLLDVDDVSQVK
IYREAAGPRVLRQLTESVRSALDSGEFSEEAKEANEALAENFKIPYVVIQ
EQAKSLYKSTLDAWAGGGRILSAEQKESLDKMAAFLSMDASAVEEIHSDI
CSETFRKAVAESMGATGIVIDEYRAKLDELAERLGLTVRSAKAMFHAAVR
QRMGPMVQQIMYEFERSVLSKGEMARKTGKDSGADVLGATGGQLGIEGGA
AVTTDVLALIDFYVDNGIIEKAEGPEGGEVYPVTVKQLGTDERMLEALYQ
NFVVNGFGVEGEQLKRYEAGQSKLAGILGLDPAVKMKIHEEIGGTVIRRF
VNQELGKAGKLSAEGWRSSRTSRPSSKCLRRCSTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031610TIC110