prot_F-serratus_M_contig1008.172.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1008.172.1
Unique Nameprot_F-serratus_M_contig1008.172.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1146
Homology
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Match: UPI00125DA6DC (DNA mismatch repair protein MSH5 isoform X1 n=10 Tax=Ipomoea TaxID=4119 RepID=UPI00125DA6DC)

HSP 1 Score: 297 bits (760), Expect = 4.020e-82
Identity = 279/908 (30.73%), Postives = 418/908 (46.04%), Query Frame = 0
Query:  189 PEDESAVDEEQSTAILAVCRHGDTLGLAAYREVDNVIDIQETHAFQSDMVDTLEGIKLLVRPWLILTDLNMTNNTALFDMLVAPLLEGGDEIECKLLKRSCWDYQGAVRRICANLKVKSLERQHQVAT--EGRNNAERVAVWGKGSSDGPSRRGGGDPFQDTFNRLASVIDFQAQQQTRALGALMSYLQS-KVFTLEG-----SGTVTVAAVRQLDSSRSMFIDAMALRSLGIIAEEFHPNVLSGKGRSKEGFSVFGLFDRTRTASGRRCLKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARILLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRD--SLMVLKTRAEALKAAGSGVAERA-DHESQ--AFLARLVDDIDTVVLRCCLDGLSDVIDSTASAEDREVVIRIGFDEDLDRKRNLLAELPDILRAVGK---ARDRIVLEENLVLDELSVEYLPQIGFLTI-----LDKRFSDLAPPSFIFAFAQARGHPPAGDT--VYYKNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALEEALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKNGRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIAD---GSRVALITGANCSGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQSTFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRHLSQTRR--KCLFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVPAKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSYGIACAEFAGIPPDVLDRA 1068
            P  +S  +E      +A   HG  +G++ Y      + + E     S     L+ IK  V+P +I T    T +   F   +       +    KL+K S + Y+ A  R C ++      + H  A   +   +A  + ++ + +    S        ++  + L+S++D  +  Q RA G L++ L+  ++  +       + ++ V +V ++  ++ + +D+ AL +L I   + HP+ + G GR+KEGFSVFG+ ++  T  GRR L+ W L+P+ D+ D+NAR D +  L+ AE  E+   LR  L    D+  IL        K+       C      T  DW   ++SI S L I     + + +   E LK    G+ ++A DH S   AF+  LV             G+ DV  + +  +  E +++ GF  +LD  R +   LPD L  V     AR   ++ EN +     + Y+ QIG+L       LD+   +  P  F FAF    G     DT   +Y+  +  E+D  +GDI  KI D +                     I R L   +L+    +H A    AELD  +SL  VA    + RP +  +N++ I NGRH LQ                E+TVD FIPNDT I D     +V +ITG N SGKS+YVKQV + VFLSH+GSFVPAE A +GLTDRIF  + T +  +  QSTF ID++Q   V  M+R  T RSL L+DEFGKGT   DGIGL+  ++ H        K L   H  EIF  G +          E   +  + M V +P                       + S D ED V      L++LVPG    S+G+ CA+ AGIP +V+ RA
Sbjct:   31 PSPDSLENENTLEVYMACIMHGHRIGVSYYNSSIRQLYVMEIWEDGSKDFPLLDMIKYQVQPGVIYTS---TKSEESFLAALQRCDNTSEAATVKLVKSSLFSYEQAWHR-CGDI----TRKMHLCAYYYDSCYSAILILMYLQVTGMDDSLN-----IKERISFLSSMMDISSDVQVRASGGLLAILEDERIIDVHEQNEFENASIAVDSVSEISLNKFLKVDSAALEALQIFQIDKHPSHM-GIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLDDLNARLDAISFLLFAE--ELSVSLRETLKSVKDVPYIL--------KKFNSPSCTC------TSTDWAAFLKSICSLLHINKIFEVGISEDLREQLKYLNLGIVKKAGDHLSSDLAFICELV------------IGVLDV--NRSKEKGYETIVKDGFCNELDELRQIYEGLPDFLEEVSSLELARLPHMVGENGLP---CIVYIHQIGYLLCIFNEKLDEEMQEKLP-DFEFAFLDEDG-----DTKKFFYRTSKTRELDTLLGDIYHKILDMERA-------------------ITRDLVSHILQFVVPIHNAVNFVAELDCLLSLTLVARQNNYARPTLTAENILDIHNGRHLLQ----------------EMTVDTFIPNDTKILDEEFSGKVNIITGPNYSGKSIYVKQVALIVFLSHIGSFVPAEAATVGLTDRIFCAMGT-KFMTAEQSTFMIDLHQ---VGMMLRHATSRSLCLLDEFGKGTLTEDGIGLLGGVINHFVSCYDPPKVLVCTHLTEIFDSGCL---------LESERIKYYTMSVLSPE----------------------KNSADLEDVVF-----LYRLVPGQALLSFGLHCAQLAGIPEEVVKRA 810          
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Match: A0A8K0HIR8_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HIR8_9ROSA)

HSP 1 Score: 295 bits (755), Expect = 6.420e-82
Identity = 234/754 (31.03%), Postives = 361/754 (47.88%), Query Frame = 0
Query:  345 FQDTFNRLASVIDFQAQQQTRALGALMSYLQSK--VFTLE----GSGTVTVAAVRQLDSSRSMFIDAMALRSLGIIAEEFHPNVLSGKGRSKEGFSVFGLFDRTRTASGRRCLKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARILLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRD--SLMVLKTRAEALKAAGSGVAERADHESQAFLARLVDDIDTVVLRCCLDGLSDVIDSTASAEDREVVIRIGFDEDLDRKRNLLAELPDILRAVGKARDRIVLEENLVLDELS--VEYLPQIGFLTILDKRFSDLAPPS----FIFAFAQARGHPPAGDTVYYKNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALEEALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKNGRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIADGSRVALITGANCSGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQSTFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRHLSQTRR--KCLFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVPAKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSYGIACAEFAGIPPDVLDRAREVARLEDKGRPIQ 1082
             +D    L+S++D ++  Q RA G L++ L+S+  V TLE    G+ ++T+  V ++  +  + +DA A  +L I   + HP+ + G GR+KEGFSVFG+ ++  T +GRR L+ W L+P+ D+ ++N+R + +   + +E  E+    R  L    D+  IL        K+       C  G      DW   ++S+ S L I     + + ++  E LK     + ++A       +A + +          + G+ DV  + +  +    +++ GF ++LD  R +  +LP+ L  V      +     L   +L   + Y+ QIG+L  + +   D   P     F FAFA   G       ++Y+ P+  E+D  +GDI  KI D +   +R   +   L        +++A+  A               AELD  +SLA VA    +VRP +  DN + I+NGRH LQ                E+TVD FIPNDT I +  R+ +ITG N SGKS+Y+KQV + +FLSH+GSFVPA+ A +GLTDRIF  + + +  +  QSTF ID++Q   V  M+R  T RSL L+DEFGKGT   DGIGL+   + H        K L   H  E+F Q  +    P   + +   +SV R D                             S D ED V      L++LVPG    SYG+ CA  AG+P +V+ RA  V       R ++
Sbjct:  121 IKDRICYLSSMMDMESDVQVRASGGLLAILESERIVDTLEHKECGNASITIDCVTEISLNNFLKLDAAAHEALQIFQTDKHPSHM-GIGRAKEGFSVFGMMNKCVTPAGRRLLRNWFLRPILDLENLNSRLNAISFFLYSE--ELMLSFRETLKSVKDIPHIL--------KKFNSPSSICATG------DWTAFLKSVCSLLHINKIFEVGISESLREHLKYLNLNIVDKAGSSITTEVAYVYE---------LVIGVLDV--NRSKEKGYGTIVKDGFCDELDELRQIYEQLPEFLEEVTSME--LARFPQLCKGKLGPCIVYIQQIGYLMCILEDKHDYTTPEKIQDFEFAFADVDGET---KRIFYRTPKTQELDHLLGDIYHKILDMERAIVRDLVSHIFL----FSTHLLKAVNFA---------------AELDCLLSLALVAHQNNYVRPCLTVDNFLDIQNGRHVLQ----------------EMTVDTFIPNDTKIQNDGRINIITGPNYSGKSIYIKQVALIIFLSHIGSFVPADAATVGLTDRIFCAMGS-KLMTAEQSTFMIDLHQ---VGMMLRQATSRSLCLLDEFGKGTLTEDGIGLLGGTINHFVSCDEPPKVLVCTHLTELFDQNCL----PESEKIKFYTMSVLRPD---------------------------DSSTDTEDVVF-----LYRLVPGHAPLSYGLHCALLAGVPEEVIKRAAFVLEASGHNRHVE 766          
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Match: A0A3P3YF60_PLABS (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YF60_PLABS)

HSP 1 Score: 305 bits (782), Expect = 9.730e-82
Identity = 231/744 (31.05%), Postives = 364/744 (48.92%), Query Frame = 0
Query:  351 RLASVIDFQAQQQTRALGALMSYLQSKVFTLEGSGTVTVAAVRQLDSSRSMFIDAMALRSLGIIAEEFHPNVLSGKGRSKEGFSVFGLFDRTRTASGRRCLKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARILLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRDSLMVLKTRAEALKAAGSGVAERADHESQAFLARLVDDIDTVVLRCCLDGL-SDVIDSTASAEDREVVIRIGFDEDLDRKRNLLAELPDILRAVGKARDRIVLEENLVLDELSVEYLPQIGFLTILDKRFS-DLAPPSFI----FAFAQARGHPPAGDTVYYKNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALEEALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKNGRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIAD---GSRVALITGANCSGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQSTFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRHLS----QTRRKCLFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVPAKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSYGIACAEFAGIPPDVLDRAREVARLEDKGRPI 1081
            +L SV++F  ++   A+G L+SYL       +    +TV+A+R LD S  M +++ A+RSL I   E HP    G    KEG S+FGL D T+TA GRR LK W++ P  +I  I  R + VE L+   N      +   L    D+ R++ +I+  R                +T+ DW  + ++++  + + +                  +A+R + E +  L ++  + +  +L   L+ L + VID   S   +++ IR G    LD  ++    L D L  V    + +          + V +LPQ+G L  L    + D+     I    F F        A D ++YKN R  ++D+ IGDI+  I D Q+ F+R                    L E ++   + L A +A  AE+D+ +SLA  A+ +G  RP +V +N + I+NG H LQ                + TVD+FIPNDT + D   G  V ++TG N SGKSV +KQVG+  +L+  GSFVPA+KA++GLTDRIF  +     S+L  STF  D NQ   +++M++  T  SLLL+DEFGKGT+  DG+ L+A  +R++S    Q   + + T HFHE+FS GL+        + + ++++ F+MD+        +P      + N                       L+K+VPG++  SYG+ CA  AG+P  V++RAR V+      +P+
Sbjct:  196 KLMSVLNFDKREMICAIGGLLSYLHRNRINHQLDDQLTVSAIRSLDLSDIMIVESSAMRSLCIFQRESHP---VGSSTRKEGLSIFGLLDETKTAQGRRLLKSWLMNPTLNIDTIIQRHEAVEQLLHPNNEHWLAEVALILRSVKDINRLISKIQNVR----------------ATYSDWALISETLQQFIALHE------------------LAKRENLEFE-HLRKIASESEDELLE--LNNLITSVIDFAQSRVTQKLEIRAGISPQLDSLKHDYERLGDFLTTVA---EELFQSSPATFSGVEVLHLPQLGHLIALPVDANRDIQTHKHIDQLEFQFI-------AEDKLFYKNERTRQLDNEIGDIRGVICDIQSSFIRE-------------------LAEYVIRCRSRLTALSAIVAEIDSLVSLAQAAASYGLTRPAMVSENCLRIQNGFHLLQ----------------DQTVDQFIPNDTTLGDCDDGKPVIVLTGPNSSGKSVLLKQVGIIAYLAQCGSFVPAQKAVLGLTDRIFCHMDIA--SNL--STFAADCNQ---ISYMLKHATSSSLLLLDEFGKGTSKEDGLALLATTLRYISNRPGQECPRAIVTTHFHELFSFGLLS-------QDDATNIACFKMDIVT------KPLTMTAPIPNSVAF-------------------LYKMVPGISMHSYGVECASQAGLPEHVINRARSVSESYMNFKPV 815          
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Match: A0A8B7Y5V7_ACAPL (mutS protein homolog 5-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y5V7_ACAPL)

HSP 1 Score: 296 bits (758), Expect = 1.270e-81
Identity = 230/771 (29.83%), Postives = 361/771 (46.82%), Query Frame = 0
Query:  352 LASVIDFQAQQQTRALGALMSYLQSKVFTLEGSG---TVTVAAVRQLDSSRSMFIDAMALRSLGIIAEEFHPNVL-SGKGRSKEGFSVFGLFDRTRTASGRRCLKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARILLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRDSLMVLKTRAEALKAAGSGVAERADHESQAFLARLVDDIDTVVLRCCLDGLSDVIDSTASAEDREVVIRIGFDEDLDRKRNLLAELPDILRAVGKARDRIVLEENLVLDELSVEYLPQIGFLTILD-----KRFSDLAPPSFIFAFAQARGHPPAGDTVYYKNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALEEALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKNGRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIADG-SRVALITGANCSGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQSTFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRHLSQTRRKC---LFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVPAKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSYGIACAEFAGIPPDVLDRAREVARLEDKGRPIQPRSVGNRERGRVPTASSQVQNALKLFL 1109
             +S++ F      RA+G L+ YL+ K   +E  G    V V ++R     R + +D     +L I  +E HP+   SG   +KEG S+FG+ ++T++  G R ++ W ++P CD+  +N RQD V   M + N E+   L+  L    ++ARIL ++++A+                ++  DW  L ++  S ++I D                   A+RAD E    +AR      T  L      ++ ++D   S      V++   D DLD ++     LPD++  V  ARD +      V +E +V YLPQ+G+L  +      ++  D   P   F F        + + V+YK+ R   +D  +GD Q +ITD + +                   IM  L+ ++LE+   L       AELD  +SLA+ A D  ++RP++ +DN+I I  GRHPLQ                EL V  F+PNDT+  D   ++  +TG N SGKSVY+KQVG+  F+SH+GSFVPAE A IG+ D I+TR+ T+E+ S+  STF ID+NQ   +A  + + T+ SL++IDEFGKGT   DG+ L+ A ++H       C   L + HFH I  Q ++    P+        + V                 DE++                          L++L+ G T  SY    +  AG+P ++L R   V  L  + +PI      N + GR+    +  ++ LKL L
Sbjct:  237 FSSLVPFDCHCMVRAVGGLLKYLEKKRVGVELEGYDVRVPVLSLRMFSLERMVSVDENTYSALQIFQKERHPSAYKSGGSGAKEGLSLFGILNKTKSVVGSRLMRVWFMRPSCDLALLNQRQDAVAFFMASANIEVTTSLQEYLKHVKNVARILKQMRQAQ----------------ASVNDWQALYKTAYSAINIGDICR----------------AQRADIEIFKKIARGF----TEDLHYIASIINRIVDFDESTAQNRFVVKANVDADLDHRKRTYNGLPDLMTQV--ARDELNRLSRDV-EECNVIYLPQLGYLLAIPCTPRMQKEKDFNIPGLEFVFL-------SNNMVHYKSARTKALDVKLGDTQCEITDLETQ-------------------IMHKLQNSILERSQVLFTVMQYAAELDCLLSLAAAARDQNYIRPDLTEDNIIHISGGRHPLQ----------------ELCVTPFVPNDTFSGDKYGKMKFLTGPNASGKSVYLKQVGLIAFMSHIGSFVPAEGATIGMLDGIYTRVHTLESVSVGLSTFMIDINQ---MAVALNNATQNSLVIIDEFGKGTETVDGVALLCACLKHWLARETLCPHVLVSSHFHSIIKQKML----PSSQELTYQTMEVLHSG-------------DEMVF-------------------------LYQLIEGHTELSYASHISAQAGLPDELLKRGNRVTDLLAQCKPIHRVDSANVD-GRLQKCQNIAESFLKLDL 880          
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Match: A0A803Q821_CANSA (DNA_MISMATCH_REPAIR_2 domain-containing protein n=11 Tax=Cannabaceae TaxID=3481 RepID=A0A803Q821_CANSA)

HSP 1 Score: 293 bits (750), Expect = 1.650e-81
Identity = 231/724 (31.91%), Postives = 352/724 (48.62%), Query Frame = 0
Query:  352 LASVIDFQAQQQTRALGALMSYLQSK--VFTLE----GSGTVTVAAVRQLDSSRSMFIDAMALRSLGIIAEEFHPNVLSGKGRSKEGFSVFGLFDRTRTASGRRCLKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARILLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRDSLMVLKTRAEALKAAGSGVAERADHESQAFLARLVDDIDTVVLRCCLDGLSDVIDSTASAEDR-EVVIRIGFDEDLDRKRNLLAELPDILRAVGK---ARDRIVLEENLVLDELSVEYLPQIGFLT-ILDKRFSDLAPPS---FIFAFAQARGHPPAGDTVYYKNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALEEALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKNGRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIADGSRVALITGANCSGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQSTFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRHLSQTRR--KCLFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVPAKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSYGIACAEFAG 1059
            L+S++D  +  Q RA G L++ L+++  V TLE    G+ ++T+ +V Q+  +  + +DA A  +L I   + HP+ + G GR+KEGFSVFG+ ++  T +GRR L+ W L+P+ D  ++N+R +G+   + +E  E+   LR  L    D+  IL        K+       C         DW   ++S+ S L +     V              + E A++ S   + +    I T  L    + +  V+D T S +   E +++ GF ++LD  R +  ELP+ L  V     AR   + + NL      + Y+ QIG+L  IL+++  ++       F+FAF+   G        +Y+ P+  E+D+ +GDI  KI D +   +R   +  L+                       LH A   TAELD  +SLA VA    +VRP + ++N++ I+NGRH LQ                E+TVD FIPNDT I +  R+ +ITG N SGKS+Y+KQV + VFLSH+GS+VPAE A +GLTDRIF  + + +  +  QSTF ID++Q   V  M+R    RSL L+DEFGKGT   DGIGL+   + H        K L   H  E+F +  +        + +   +SV R D                             S D +D V      L++LVPG    SYG+ CA+ AG
Sbjct:  114 LSSMMDMGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDSVVQISLNNFLKLDAAAHEALQIFQTDKHPSHM-GIGRAKEGFSVFGMMNKCVTPAGRRLLRNWFLRPILDFDNLNSRLNGISFFLSSE--ELMLSLRETLKSVKDIPHIL--------KKFNSPSSICA------IADWTAFLKSVCSLLHVNKIFEV---------GISESLQEHANYLSLDIIGKASSSI-TTELAYVYELVIGVLDVTRSKQKGYETIVKEGFCDELDELRQIYEELPEFLEEVTSVELARFPQLCKSNLAP---RIVYINQIGYLLCILEEQIDEITLEKIQDFVFAFSDVDGET---KRFFYRTPKTQELDNLLGDIYHKILDMERAIIRDLVSHILIFSTH-------------------LHKAVNFTAELDCLLSLALVARQNNYVRPTLTEENLLDIQNGRHVLQ----------------EMTVDTFIPNDTKIQNEGRINIITGPNYSGKSIYIKQVALIVFLSHIGSYVPAEAATVGLTDRIFCAMGS-KLMTAEQSTFMIDLHQ---VGTMLRQANSRSLCLLDEFGKGTLTEDGIGLLGGTISHFVSFDEPPKVLVCTHLTELFDENCLS----KSEKIKFYTMSVLRSD---------------------------NNSTDTDDIVF-----LYRLVPGYALLSYGLHCAQLAG 729          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1008.172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00125DA6DC4.020e-8230.73DNA mismatch repair protein MSH5 isoform X1 n=10 T... [more]
A0A8K0HIR8_9ROSA6.420e-8231.03Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A3P3YF60_PLABS9.730e-8231.05DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A8B7Y5V7_ACAPL1.270e-8129.83mutS protein homolog 5-like isoform X1 n=2 Tax=Aca... [more]
A0A803Q821_CANSA1.650e-8131.91DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 746..766
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availableGENE3D1.10.1420.10coord: 401..642
e-value: 2.7E-29
score: 104.8
NoneNo IPR availableGENE3D3.40.50.300coord: 785..1101
e-value: 7.5E-73
score: 247.0
NoneNo IPR availablePANTHERPTHR11361:SF20MUTS PROTEIN HOMOLOG 5coord: 322..1090
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 322..1090
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 840..1073
e-value: 1.7E-49
score: 180.4
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 844..969
e-value: 8.7E-36
score: 123.7
IPR000432DNA mismatch repair protein MutS, C-terminalPROSITEPS00486DNA_MISMATCH_REPAIR_2coord: 924..940
IPR007696DNA mismatch repair protein MutS, coreSMARTSM00533DNAendcoord: 430..809
e-value: 1.0E-29
score: 114.7
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 407..777
e-value: 3.5E-27
score: 95.9
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 404..783
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 785..969

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1008contigF-serratus_M_contig1008:49957..60386 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1008.172.1mRNA_F-serratus_M_contig1008.172.1Fucus serratus malemRNAF-serratus_M_contig1008 47444..60878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1008.172.1 ID=prot_F-serratus_M_contig1008.172.1|Name=mRNA_F-serratus_M_contig1008.172.1|organism=Fucus serratus male|type=polypeptide|length=1146bp
METHTNQLDSTQPRGSLYARAAAESAKTNLSSLFFGAAGTRSPGSHNPEP
SMASQPVACAGDRRHPQGPSHFSNTRRSPCPGSNASTMLGTGPGGDHSRP
RTQSLDSLLTQVPARRSHQKGPHDDSGASDGRSMAEPRMLRLEMDASVAS
SQRDLVDSPLRHKGEVSQRQELEVVQAKDRLGRTNGLSPEDESAVDEEQS
TAILAVCRHGDTLGLAAYREVDNVIDIQETHAFQSDMVDTLEGIKLLVRP
WLILTDLNMTNNTALFDMLVAPLLEGGDEIECKLLKRSCWDYQGAVRRIC
ANLKVKSLERQHQVATEGRNNAERVAVWGKGSSDGPSRRGGGDPFQDTFN
RLASVIDFQAQQQTRALGALMSYLQSKVFTLEGSGTVTVAAVRQLDSSRS
MFIDAMALRSLGIIAEEFHPNVLSGKGRSKEGFSVFGLFDRTRTASGRRC
LKEWMLKPLCDIGDINARQDGVEVLMQAENAEICKRLRSQLGKSHDMARI
LLRIKKARTKREGGEMGACGRGVVSTFMDWCKLIQSIESTLDIRDSLMVL
KTRAEALKAAGSGVAERADHESQAFLARLVDDIDTVVLRCCLDGLSDVID
STASAEDREVVIRIGFDEDLDRKRNLLAELPDILRAVGKARDRIVLEENL
VLDELSVEYLPQIGFLTILDKRFSDLAPPSFIFAFAQARGHPPAGDTVYY
KNPRMYEMDDGIGDIQAKITDDQARFLRHASATFLLRGIRHGAKIMRALE
EALLEQEAALHAAAAATAELDAAMSLASVASDFGFVRPEVVQDNVIIIKN
GRHPLQASSWHQYAKHDTLKAQELTVDRFIPNDTYIADGSRVALITGANC
SGKSVYVKQVGVTVFLSHVGSFVPAEKAIIGLTDRIFTRISTVETSSLPQ
STFTIDVNQASHVAHMVRSGTERSLLLIDEFGKGTAPADGIGLVAALVRH
LSQTRRKCLFTLHFHEIFSQGLVKIHSPNDMRTELSDVSVFRMDVYAPVP
AKARPQLDEVMVENGATVENCRRSFDDEDWVAARPTPLFKLVPGVTSTSY
GIACAEFAGIPPDVLDRAREVARLEDKGRPIQPRSVGNRERGRVPTASSQ
VQNALKLFLTPPGGSSWQHAPDSLVDSLLAAADCLGRFTADGGLH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR007696DNA_mismatch_repair_MutS_core
IPR036187DNA_mismatch_repair_MutS_sf
IPR027417P-loop_NTPase