prot_F-serratus_M_contig1007.168.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1007.168.1
Unique Nameprot_F-serratus_M_contig1007.168.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length283
Homology
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Match: A0A024GTF9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTF9_9STRA)

HSP 1 Score: 167 bits (422), Expect = 4.880e-47
Identity = 108/220 (49.09%), Postives = 141/220 (64.09%), Query Frame = 0
Query:    1 MFQTARSAVGSVARRLGRGIDELGAALE-THPFREQLLPSIRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEI 219
            M +    A+G   R  G+ +D  G  LE +  + E L PS R V   G++P  EAA+F+APNASVIG V VG+GSS+WYG+ +RGD+NH+ IG  T + D+A++HVA +   +P++IGN+V IGP + IHACT+   C          XXXXXXXXXXXXXXXXXX       QLW+G PA YVRDL+ +E   I   AI+  E+SL+HA EC K   EI
Sbjct:    1 MLKNGLEAIGKSIRSFGQSLDRTGVLLEGSASYTEHLNPSTRCVNNAGRRPKLEAAAFIAPNASVIGEVNVGSGSSVWYGATLRGDINHITIGNHTNVLDAAIIHVAKIHRDIPTIIGNHVTIGPSSIIHACTIGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLWSGVPARYVRDLTTEEKAFIKQSAIEYAELSLIHAKECEKSLEEI 220          
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Match: A0A2J6L5W8_LACSA (Uncharacterized protein n=2 Tax=Asteraceae TaxID=4210 RepID=A0A2J6L5W8_LACSA)

HSP 1 Score: 167 bits (423), Expect = 6.060e-47
Identity = 96/236 (40.68%), Postives = 142/236 (60.17%), Query Frame = 0
Query:    9 VGSVARRLGRGIDELGAALE-THPFREQLLPSIRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDSAVVHVA--GLAGK-MPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKPSRDPTYVFQV 240
            VGS  R  G+ +D +G +L+ +H F EQ+      +    K P+ +  +FVAP ASVIG+V+VG GSS+WYG V+RGDVN + IG GT I D+A+VHVA   ++G  +P+ IGNNV +G  A +H CT+EDE  V  GAT++D                  +T +P G++W G PA ++R L+E+E+  I+  A +   +++VHASE AKG  EIEL+ +   +   +D  Y   +
Sbjct:   11 VGSWIRVAGQTVDRVGCSLQGSHLFEEQVSRHRTLMNLFDKDPAVDKDAFVAPGASVIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNALVHVAKSNISGNVLPTTIGNNVTVGHGAVLHGCTVEDEAFVGMGATLLDGTHVEKNAMVAAGALVRQNTRIPFGEVWGGNPAKFMRKLTEEEIAFISQSATNYTNLAMVHASENAKGFEEIELEKKLRKKFARKDEEYDSMI 246          
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Match: A0A5J4XP29_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XP29_9CHLO)

HSP 1 Score: 166 bits (421), Expect = 8.630e-47
Identity = 94/240 (39.17%), Postives = 140/240 (58.33%), Query Frame = 0
Query:    1 MFQTARSAVGSVARRLGRGIDELGAALE-THPFREQLLPSIRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDSAVVHVAGLAGK---MPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKPSRDPTY 236
            M  T   ++G+  R  G+ ID +GAA++  + +RE L       A+  K+P      FVAPN+S+IG+V +G  SS+WYG+V+RGDVN + +GE + I D+ VVHVA    +   +P++IGNNV IG  +TIHACT+ED  +V   AT++D                  +T VP G++WAG PA  +RDL  +E   I   A++   ++ +HA+E AK P EI++D     ++  RDP Y
Sbjct:    1 MAATIIKSLGTAIRTAGQAIDSMGAAMQGKYAYRETLSKHQTLQAFANKRPQLAEDIFVAPNSSMIGDVSLGKSSSVWYGAVLRGDVNSIKVGENSNIQDNVVVHVAKHNAQDRALPTIIGNNVTIGHSSTIHACTIEDSALVGMKATLLDGVTVQKGAMVAAGSLVAPNTTVPTGEIWAGNPAKKLRDLDAEEAEFIMQSAVNYSALARIHAAENAKTPEEIQIDKDAREDRLERDPDY 240          
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Match: A0A1E7F473_9STRA (Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F473_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.060e-46
Identity = 119/266 (44.74%), Postives = 163/266 (61.28%), Query Frame = 0
Query:    8 AVGSVARRLGRGIDELGAALETHPFREQLLPSIRSVAYKGKQPSTEAAS-FVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDSAVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLE-IELDLRKWNEKPSRDPTYVFQVPPEGDDNLAYNDVEGQGVPGRVFNTNLRSPD 271
            A    AR++G  +D +GA +E   + E+L+PS R V+  G  P+   A+ F+AP+ASVIGNV +G  SS+WYG+ VRGDVN + IG  T +GD AVVHVA + G  P+ IG+NV IG  A +H                  XXXXXXXXXXXXXXXXXX T VP+G+LW+G+PA  VR L+ DE+ SI+  A D  E++ +HA E +K   + IE D  + + K  +   +   +P         +DV GQGVPGR+FN+ L +P+
Sbjct:   11 AASGAARKIGAALDSMGAGMEVAKYTERLVPSSRIVSVNGVSPALSGANNFIAPSASVIGNVTIGEHSSVWYGATVRGDVNTLKIGSKTSVGDRAVVHVAKIQGDHPTYIGDNVTIGACAIVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVPSGELWSGSPAKKVRSLTADEIASISESAHDTLELAYLHAVENSKDYKQLIEEDEDRLDRKLRKKAWFDPNIPDP-------DDVLGQGVPGRIFNSTLTNPE 269          
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Match: G5DWW8_SILLA (GAMMA carbonic anhydrase (Fragment) n=2 Tax=Silene latifolia TaxID=37657 RepID=G5DWW8_SILLA)

HSP 1 Score: 166 bits (421), Expect = 1.140e-46
Identity = 97/245 (39.59%), Postives = 143/245 (58.37%), Query Frame = 0
Query:    9 VGSVARRLGRGIDELGAALE-THPFREQLLPSIRSVAYKGKQPSTEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDSAVVHVA--GLAGK-MPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDXXXXXXXXXXXXXXXXXXDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAIDNQEMSLVHASECAKGPLEIELDLRKWNEKPSRDPTY------VFQVPPE 243
            VG   R  G+ +D LG  L+  H F+E L      +    K P  +  +FVAP+ASVIG+V +G GSS+WYG V+RGDVNH+ IG GT I D+++VHVA   L GK +P++IG+NV +G  A +HACT++DE  V  GAT++D                  +T +P+GQ+W G PA ++R+L+E+E+  I   A +   ++ +HA+E AK   EIE +     +  ++D  Y      V + PPE
Sbjct:   11 VGFWIRETGQAMDRLGCRLQGNHHFQEHLSRHRTLMNIFDKAPVVDKEAFVAPSASVIGDVLIGCGSSIWYGCVLRGDVNHISIGSGTNIQDNSLVHVAKSNLTGKVLPTIIGDNVTVGHSAVLHACTVDDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNTKIPSGQVWGGNPAKFLRNLTEEEIAFIAQSAANYTNLAQIHAAENAKSFDEIEFEKALRKKYANKDEEYDSMIGIVRETPPE 255          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1007.168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024GTF9_9STRA4.880e-4749.09Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A2J6L5W8_LACSA6.060e-4740.68Uncharacterized protein n=2 Tax=Asteraceae TaxID=4... [more]
A0A5J4XP29_9CHLO8.630e-4739.17Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A1E7F473_9STRA1.060e-4644.74Gamma carbonic anhydrase n=1 Tax=Fragilariopsis cy... [more]
G5DWW8_SILLA1.140e-4639.59GAMMA carbonic anhydrase (Fragment) n=2 Tax=Silene... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 53..84
e-value: 1.2E-4
score: 21.7
NoneNo IPR availableGENE3D2.160.10.10coord: 42..214
e-value: 6.3E-47
score: 161.0
NoneNo IPR availablePANTHERPTHR13061DYNACTIN SUBUNIT P25coord: 5..229
NoneNo IPR availablePANTHERPTHR13061:SF11coord: 5..229
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 42..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1007contigF-serratus_M_contig1007:267130..280034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1007.168.1mRNA_F-serratus_M_contig1007.168.1Fucus serratus malemRNAF-serratus_M_contig1007 267130..280034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1007.168.1 ID=prot_F-serratus_M_contig1007.168.1|Name=mRNA_F-serratus_M_contig1007.168.1|organism=Fucus serratus male|type=polypeptide|length=283bp
MFQTARSAVGSVARRLGRGIDELGAALETHPFREQLLPSIRSVAYKGKQP
STEAASFVAPNASVIGNVKVGAGSSLWYGSVVRGDVNHVVIGEGTCIGDS
AVVHVAGLAGKMPSVIGNNVVIGPRATIHACTLEDECMVCAGATVMDGAK
VSSGAMVAPGATVSPDTDVPAGQLWAGTPAVYVRDLSEDEVVSITNMAID
NQEMSLVHASECAKGPLEIELDLRKWNEKPSRDPTYVFQVPPEGDDNLAY
NDVEGQGVPGRVFNTNLRSPDVEPFEREYAGDV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf