prot_F-serratus_M_contig1004.146.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1004.146.1
Unique Nameprot_F-serratus_M_contig1004.146.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1083
Homology
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Match: A0A814M0T7_9BILA (RBR-type E3 ubiquitin transferase n=11 Tax=Rotaria TaxID=231623 RepID=A0A814M0T7_9BILA)

HSP 1 Score: 156 bits (395), Expect = 7.090e-36
Identity = 101/337 (29.97%), Postives = 155/337 (45.99%), Query Frame = 0
Query:  694 CPICLSDIPAEEIFMVDCKDQXXXXXXXXXXHCSVQLLDSGVIPACPLSNTTCGHELGQGEVERVFLLRSYSIVRDPMDQMENDQRALDT---CRTLLTRRGLQSTGAVPCVSAQCGNWMVPEESGQ--RVRCSACLVDFCLSCKRSPYHYTADCDDVVRLTREWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLRAEYDKM---EDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGARFFWSMAPPYIGDRGVRKETPFAEREPKAAARSRYFIAPSIPLRCDRCHRDVVGPLFRCIHCPSFMCCLECQ 1022
            C IC+     ++IF+  C +            C V++ ++ +     L+  TC ++L  GE++++              ++  DQR L      +    R    S G + C +  C     P    +  RV C  C  +FC  C +  YHY   C+++  +T  W +W    +  +L   A QD  +   L ++E   K H  +    E+LR  Y+     E +K + CR CP C+RV+E++ GCD M+CGRD HGGNVQ+GCG  F W  A  Y     +R+    A   P  A  S   +  +I   CD CH  V G  F C+HCPS + C +C+
Sbjct:  320 CDICMESCFLDDIFVFGCDESHKLCYKCYEQSCIVKMNNNEI-----LTCATCPYQLQYGELKQL--------------RISPDQRNLVVEYQVQKTFDRYASGSRGVIKCPNQACMWAFEPGNPNEHFRVTCQMCANEFCSFCNQQ-YHYRTVCEEIPVITERWFFWCNTERGRYLAERAKQDANYAVQLAEYE---KQHAASRQRNEELRRRYETSVEDEKYKAQNCRYCPHCNRVVERMEGCDSMVCGRDYHGGNVQSGCGKNFTWEQAKRYK-SAAIRRPEQLANELP--APESPLVVHENI--NCDGCHEAVRGIRFDCVHCPSLIYCEKCE 628          
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Match: A0A7S4SN24_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SN24_9DINO)

HSP 1 Score: 156 bits (395), Expect = 7.160e-36
Identity = 107/323 (33.13%), Postives = 146/323 (45.20%), Query Frame = 0
Query:  726 CSVQLLDSGVIPACPLSNTTCGHELGQGEVERVFLLRSYSIVRDPMDQMENDQRA--LDTCRTLLTRRGLQSTGAVPCVSAQCGNWMV--PEESGQRVRCSACLVDFCLSCKRSPYHYTADCDDVVRLTREWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLRAEYDKMEDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGARFFWSMAPPYIGDRGV--RKETPFAEREPKAAARSRYFIAPSIPLRCDRCHRDVVGPLFRCIHCPSFMCCLECQDMACRDPRHVHHIFQIMDTD 1042
            C V+  D    P CP     CG+ LG+ ++E V         R   +++E  ++A   +    L    G Q+T    C  ++CG  +V    E+ +   CS      C  C  +PYHY A C DV  L   W  WL  G+ A+           + L R+ E      Q         + E ++ E WK   CR CP C R +EKV GC+ M+CG++AHGGN Q GCG RF W  A PY    G   R  T    R      R    +     L C    + +VGP FRCIHCP+F CCL+C++    +     H+FQIM  D
Sbjct:  252 CMVRWADERRFPNCPTEG--CGYRLGEHDLEDV---------RVSAERLEAFRKAGVEEGLLALQQEEGSQAT-IFRCTGSRCGAAVVLGANEARRCWTCSCGAPPTCTGCGATPYHYHARCADVQPLRARWLAWLQGGREAY-----------RGLQRRAEREATAQQXXXXXXXXRQTELERDEQWKAEHCRLCPKCSRTVEKVDGCNTMICGQNAHGGNRQPGCGHRFSWRDARPYKPRAGFARRMATTMLARRGAVGGRGVRHLFTHCGL-CGSGGKCIVGPRFRCIHCPAFNCCLKCEERLA-EQHEAGHVFQIMFED 549          
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Match: A0A813U5D0_9BILA (RBR-type E3 ubiquitin transferase n=4 Tax=Rotaria sordida TaxID=392033 RepID=A0A813U5D0_9BILA)

HSP 1 Score: 157 bits (398), Expect = 2.020e-35
Identity = 101/365 (27.67%), Postives = 167/365 (45.75%), Query Frame = 0
Query:  685 LVGLVSPYR-----CPICLSDIPAEEIFMVDCKDQXXXXXXXXXXHCSVQLLDSGVIPACPLSNTTCGHELGQGEVERVFLLRSYSIVRDPMDQMENDQRALDTCRTLLTRRGLQSTGAVPCVSAQCGNWMV----PEESGQRVRCSACLVDFCLSCKRSPYHYTADCDDVVRLTREWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLRAEYDKM---EDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGARFFWSMAPPYIGDRGVRKETPFAEREPKAAARSRYFIAPSIPLRCDRCHRDVVGPLFRCIHCPSFMCCLECQDMACRDPRHVHHIFQ 1037
            + G + PY      C +C+   P ++I++ DC D            C  ++ ++G I  C L    C + L +GE+ ++       I  D + ++ + Q      +        ++ G + C +  C  W+     P E   RV C  C  +FC  C +  YHY   C  + ++T+ W +W    +  +L   A QD  +   L  +  +  +++    +   LR  YD++   E +K   CR CP C RV++++ GCD M+CG+DAHGGN+Q+GCGA+F W+ A  Y         TP  ++      +    +     ++CD C  DVVG  F C+HCPS   C +C+  A  D    +   Q
Sbjct:  753 IFGSIFPYEMATRDCDVCMESCPYDDIYVFDCSDNHKLCYSCYYESCKTKM-NNGEILTCAL----CTNPLREGELNQL------RISNDELKKIRDYQ-----IKKTFDAYSSRTRGIIKCPNQNC-LWIAEAADPNERF-RVTCPICNKEFCSLCNQQ-YHYRTTCQQLPQITQRWFFWCQTERGRYLTMRAQQDAAYATQLSDYNRQNNENENRNRD---LRRRYDELMNDEKYKADNCRLCPQCKRVVQRLEGCDSMVCGQDAHGGNLQSGCGAKFNWAQAQQYNA-----AATPQPKQVILDLPKPENPVVHHNGVKCDHCQNDVVGIRFDCVHCPSLTYCEKCEQQATLDHSRENQFLQ 1090          
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Match: A0A815MAJ2_9BILA (RBR-type E3 ubiquitin transferase n=5 Tax=Rotaria TaxID=231623 RepID=A0A815MAJ2_9BILA)

HSP 1 Score: 157 bits (397), Expect = 2.440e-35
Identity = 94/343 (27.41%), Postives = 151/343 (44.02%), Query Frame = 0
Query:  694 CPICLSDIPAEEIFMVDCKDQXXXXXXXXXXHCSVQLLDSGVIPACPLSNTTCGHELGQGEVERVFLLRSYSI-VRDPMDQMENDQRALDTCRTLLTRRGLQSTGAVPCVSAQCGNWMVPEESGQ---RVRCSACLVDFCLSCKRSPYHYTADCDDVVRLTREWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLRAEYDKMEDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGARFFWSMAPPYIGDRGVRKETPFAEREPKAAA----RSRYFIAPSIPLRCDRCHRDVVGPLFRCIHCPSFMCCLECQDMACRD 1028
            C IC+   P ++I++ DC D            C  ++ +  ++     +N     EL Q  + +  L +     +R   D   N  R                 G V C + +C +W+   E      RV C  C  +FC  C +  YHY   CD + ++T+ W +W    +  +L   A QD  + A L     +  +++    +  +   E  + E +K+  CR CP C RV++++ GCD M+CG+DAHGGNVQ+GCGA+F W+ A  Y            A  +P+       +    +     ++CD C  DV+G  F C+HCPS   C +C+     D
Sbjct:  715 CDICMEARPYDDIYVFDCSDSHKSCYSCYYQSCQAKMSNGEILTCAICTNPLRDGELNQLRISKEELKKILEYQMRKTFDAYSNRTR-----------------GIVKCPNQEC-SWIAEAEDPNERFRVVCPLCNKEFCSLCNQQ-YHYRTTCDQLPQITQRWFFWCQTERNRYLTMRAEQDTTYAAQLADFNRKNTENENRNRDLRRRYEELMRDEKYKQENCRLCPSCKRVVQRLEGCDSMICGQDAHGGNVQSGCGAKFNWAQAQQYAAA---------ATNQPRQTIVDLPKPENPVVHHDGVKCDHCQNDVIGIRFDCVHCPSLTFCEKCEQQLTLD 1029          
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Match: A0A813CMB1_9DINO (Hsdl2 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CMB1_9DINO)

HSP 1 Score: 152 bits (385), Expect = 4.480e-35
Identity = 90/244 (36.89%), Postives = 116/244 (47.54%), Query Frame = 0
Query:  799 VPCVSAQCGNWMVPEESGQRVRCSAC-LVDFCLSCKRSPYHYTADCDDVVRLTREWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLRAEYDKMEDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGARFFWSMAPPYIGDRGVRKETPFAEREPKA-AARSRYFIAPSIPLRCDRCHRDVVGPLFRCIHCPSFMCCLECQ-DMACRDPRHVHHIFQIM 1039
            V C +  C + +  E    R R   C    +C  C R PYHY  DC DV  L  +W  W++ G+A +  T A    QH    RQ +        A+ EA     E    E+WK+  CR CP C RV++K+ GC+ M+CG D HGGN Q GCG RF W  A  Y      R       ++ K   A  R+        RC RC +D+VGP FRCIHCP +  C  C  D A        H+FQI+
Sbjct:  235 VHCPNPCCRSILSVEPGSGRQRVECCNWPAWCTQC-RQPYHYAVDCQDVQALRDQWLQWVSHGRAVYNETRA----QHAEFERQKQ--------ALEEAAARHVELKHDEEWKQANCRECPRCRRVVQKIDGCNSMVCGEDTHGGNRQQGCGHRFQWDKARAYQAAPDSRPLPRLDVQDVKVRGAGIRHPFC-----RCSRCRQDIVGPRFRCIHCPDYNLCASCDSDAAVAQDHPASHVFQIL 460          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1004.146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A814M0T7_9BILA7.090e-3629.97RBR-type E3 ubiquitin transferase n=11 Tax=Rotaria... [more]
A0A7S4SN24_9DINO7.160e-3633.13Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A813U5D0_9BILA2.020e-3527.67RBR-type E3 ubiquitin transferase n=4 Tax=Rotaria ... [more]
A0A815MAJ2_9BILA2.440e-3527.41RBR-type E3 ubiquitin transferase n=5 Tax=Rotaria ... [more]
A0A813CMB1_9DINO4.480e-3536.89Hsdl2 protein n=1 Tax=Symbiodinium necroappetens T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 879..899
NoneNo IPR availableGENE3D1.20.120.1750coord: 890..963
e-value: 6.2E-6
score: 28.2
NoneNo IPR availableGENE3D1.10.8.10coord: 602..661
e-value: 1.3E-7
score: 33.1
NoneNo IPR availablePROSITEPS51873TRIADcoord: 690..979
score: 18.388
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 692..748
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 788..846
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 992..1041
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 617..657
e-value: 0.0016
score: 27.7
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 617..642
e-value: 2.9E-7
score: 30.2
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 614..658
score: 12.908
IPR002867IBR domainSMARTSM00647ibrneu5coord: 782..843
e-value: 9.9E-4
score: 28.4
IPR002867IBR domainPFAMPF01485IBRcoord: 788..843
e-value: 6.5E-7
score: 29.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 689..768
e-value: 1.8E-7
score: 33.1
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 689..968
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 610..658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1004contigF-serratus_M_contig1004:230861..245823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1004.146.1mRNA_F-serratus_M_contig1004.146.1Fucus serratus malemRNAF-serratus_M_contig1004 230804..247501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1004.146.1 ID=prot_F-serratus_M_contig1004.146.1|Name=mRNA_F-serratus_M_contig1004.146.1|organism=Fucus serratus male|type=polypeptide|length=1083bp
MTDREKTNEYEGFTIVDEFLGVREASDGSDDELDFQVEAVSKTSSSCRHP
HSRTLPTSASIDIPAANRRVGLKSRAESTSSNGCEECEDKATGSKPVELD
EISTKLNKEDGEVAFFGGVNLSMGMSSPQEDYWYARDLHPSVPLMGRARK
NLRNNTLPKNLQSNSVGDAIEEANPPTKAEAGTSTTRQVMVSPVITPPTD
EHPSGSAGGSCQTGTENQERRSSATKALTVRLLPGDFTFGVVVPRDGTSV
SDLESEMQRELGLRDRVGLTIVEVCTIEDIEGIEDARHSSLPDAPDRCTV
TARPVDRVLVRARVYRQSGAIENTPEAASTATASATPSPWDHFIQLPLRS
TWSEAMNAVKAELGVPANRHAEVRRLVRTAALKSVDNDAQHGNVGDLLNG
DALELRVLEVDASMDSIDGARSLAQDAKAPHKKECVTGTVDYDPIPALVW
PQLLPGALGAVAGGSPSTGALPVASRRNRWSHVEHPRAGNIRRETRSSSG
GEIAPAVAPPPRAVFDSVASARIAFGPPPHSRLSSASPAPPFELTPQPGA
AATLALPPLSPLTSSSHFPPGAPAVRIDSSPTSPSGARPSNIEAHAWSRE
NQPDQLKEGPSILSADDEAAVSELVGMGFDRQHVVKALRECGRGDCWKEK
AISLLLEPQMSGGEVPESTQGVGLKRHKGQTSQGLVGLVSPYRCPICLSD
IPAEEIFMVDCKDQHIFCVDCLYQHCSVQLLDSGVIPACPLSNTTCGHEL
GQGEVERVFLLRSYSIVRDPMDQMENDQRALDTCRTLLTRRGLQSTGAVP
CVSAQCGNWMVPEESGQRVRCSACLVDFCLSCKRSPYHYTADCDDVVRLT
REWSWWLTEGKAAFLRTMAAQDDQHKALLRQHEGRRKDHQRAVLEAEQLR
AEYDKMEDWKERKCRRCPVCDRVIEKVSGCDLMLCGRDAHGGNVQNGCGA
RFFWSMAPPYIGDRGVRKETPFAEREPKAAARSRYFIAPSIPLRCDRCHR
DVVGPLFRCIHCPSFMCCLECQDMACRDPRHVHHIFQIMDTDTMAASSTA
NASASFSAAPAAERGRRGAYDMEVDMDDVDMV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR002867IBR_dom
IPR013083Znf_RING/FYVE/PHD
IPR031127E3_UB_ligase_RBR
IPR009060UBA-like_sf