prot_F-serratus_M_contig1002.142.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.142.1
Unique Nameprot_F-serratus_M_contig1002.142.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length237
Homology
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Match: A0A3M1G0P6_9CHLR (Argininosuccinate lyase (Fragment) n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1G0P6_9CHLR)

HSP 1 Score: 303 bits (777), Expect = 2.080e-100
Identity = 150/231 (64.94%), Postives = 188/231 (81.39%), Query Frame = 0
Query:    1 MDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKG--VSLSDAYSTGSSLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEPLFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDDVQQVWDYETSVERKNAPGGTSRSSVTSQIEKVREYVA 229
            +D V DRDFVAE+L+WA+LT+ H+S+ AEDLI+Y+  +   V+L+DAYSTGSSLMPQKKNPD+LELLRGK+GR+ G  SG L TLKGLP TYNKDLQEDKEPLFD    +   L IAAGV+ T+T + + +RA LVPEMLATDLA+YLVRKGVPFR THHI+G AV++AE+RG  L  L+P +LRTLH AF+DDV QVWDYE SVE+++A GGTSR +V +QI+ +R ++A
Sbjct:   90 LDGVSDRDFVAEFLFWATLTMVHISRWAEDLILYSSREFGFVTLADAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDFSGLLMTLKGLPSTYNKDLQEDKEPLFDAVDALAGALPIAAGVLRTLTVHPERMRAALVPEMLATDLAEYLVRKGVPFRTTHHIAGEAVRLAEERGVGLADLSPEELRTLHPAFDDDVAQVWDYERSVEQRDAAGGTSRRAVLAQIDSLRAWLA 320          
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Match: A0A7S2RZF7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZF7_9STRA)

HSP 1 Score: 308 bits (789), Expect = 4.050e-100
Identity = 150/229 (65.50%), Postives = 189/229 (82.53%), Query Frame = 0
Query:    1 MDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEPLFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDD-VQQVWDYETSVERKNAPGGTSRSSVTSQIEKVREYV 228
            +DTVCDRDF++E++  ASL + H+SQLAED+I+ N+ K V L+DAY+TGSSLMPQKKNPDALELLRGKAGR+IG+ +GFLATLKGLPR YNKDLQEDKEPLFDT  T+H CL+IAAGVV+TM PN + L   LVPEMLATDLA++LVRKGVPFRETHHISGA VK+AED G  ++ LT   L++++  F+D+ +  + +YE SVERK++ GGTS+  V  Q+EKVR ++
Sbjct:  243 IDTVCDRDFISEFMSVASLLMVHISQLAEDVILLNWRKSVQLADAYTTGSSLMPQKKNPDALELLRGKAGRVIGNATGFLATLKGLPRAYNKDLQEDKEPLFDTMDTLHSCLKIAAGVVSTMVPNGEKLLQDLVPEMLATDLAEFLVRKGVPFRETHHISGAVVKLAEDTGVSINELTLEQLQSVNPLFDDETISLLKNYEMSVERKDSLGGTSKRQVLIQVEKVRSFI 471          
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Match: A0A540VMS0_9CHLR (Argininosuccinate lyase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540VMS0_9CHLR)

HSP 1 Score: 307 bits (786), Expect = 6.180e-100
Identity = 149/230 (64.78%), Postives = 189/230 (82.17%), Query Frame = 0
Query:    1 MDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKG--VSLSDAYSTGSSLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEPLFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDDVQQVWDYETSVERKNAPGGTSRSSVTSQIEKVREYV 228
            +D V DRDF+ E+L WA+LT+ HLS+LAEDLIIY+  +   V+L+DAYSTGSSLMPQKKNPDALELLRGK GR++G L+  L  LKGLP TYNKDLQEDKEPLFDT  T+  CL+IA GV++T+  + + + A LVPEMLATDLA+YLVR+GVPFRETHHI+GAAV++AE RG PL +LT  DL+ LH AF++DV QVWDYE SVER++  GGTSR +V +QI+++R+++
Sbjct:  227 LDGVSDRDFIVEFLSWAALTMVHLSRLAEDLIIYSSREFGFVTLADAYSTGSSLMPQKKNPDALELLRGKTGRVVGALNSLLVVLKGLPSTYNKDLQEDKEPLFDTVDTLQACLQIACGVLSTLEAHPERMAAALVPEMLATDLAEYLVRRGVPFRETHHIAGAAVQLAEQRGVPLSALTVEDLKGLHPAFQEDVAQVWDYEASVERRDVEGGTSRRAVQAQIQQLRQWL 456          
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Match: A0A162PKV6_PHYB8 (Arginosuccinase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162PKV6_PHYB8)

HSP 1 Score: 304 bits (779), Expect = 8.910e-99
Identity = 150/229 (65.50%), Postives = 186/229 (81.22%), Query Frame = 0
Query:    4 VCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKG--VSLSDAYSTGSSLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEPLFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDDVQQVWDYETSVERKNAPGGTSRSSVTSQIEKVREYVAS 230
            V DRDFVAE+L+W+SLT+TH+S++AEDLIIY+  +   V L+DAYSTGSSLMPQKKNPD+LELLRGK GR+ G +SGF+ + KG+P TYNKDLQEDKEP+FD A T+   L+I AGV++T+      ++A L  +MLATDLA+YLVRKGVPFRETHHISGAAVKMAEDR   LD LT ADL+TLH +FEDDV  VW +ETS+E +N PGGTSRSSV  QI K++ +++S
Sbjct:  234 VSDRDFVAEFLFWSSLTMTHISRIAEDLIIYSTGEFGFVKLADAYSTGSSLMPQKKNPDSLELLRGKCGRVFGSMSGFMMSYKGIPSTYNKDLQEDKEPMFDAADTLSGSLQITAGVLSTLDIFPAKMKASLSADMLATDLAEYLVRKGVPFRETHHISGAAVKMAEDRKGSLDQLTVADLKTLHPSFEDDVTSVWSFETSIENRNTPGGTSRSSVQGQISKLKTWLSS 462          
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Match: A0A7R9WG83_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WG83_9STRA)

HSP 1 Score: 298 bits (762), Expect = 1.200e-98
Identity = 148/227 (65.20%), Postives = 171/227 (75.33%), Query Frame = 0
Query:    1 MDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKGVSLSDAYSTGSSLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEPLFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKGVPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDDVQQVWDYETSVERKNAPGGTSRSSVTSQIEKVREY 227
            +D+VCDRDFV E+L WAS+ L HLSQ AEDLII N  KGV + DAY+TGSSLMPQKKNPDALEL+RGKAG  +G   G  ATLKGLPR YNKDLQEDK PLF+   TV DC+ IA GV+ TM PN DNL   L PEMLATDLADYLVRKGVPFRETHHISGA V++AE+    +D+LT   L+ +   FE DV +VWDYE SVERK + GGT+++SV  QI     Y
Sbjct:   58 LDSVCDRDFVVEFLMWASMMLMHLSQFAEDLIITNMLKGVEMDDAYATGSSLMPQKKNPDALELIRGKAGIALGKAVGLTATLKGLPRAYNKDLQEDKVPLFEMVDTVKDCVAIATGVIVTMKPNPDNLIKALCPEMLATDLADYLVRKGVPFRETHHISGACVRLAEESKVSIDTLTLEQLQKIDARFEADVMKVWDYEVSVERKISIGGTAKASVQKQINDCIAY 284          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M1G0P6_9CHLR2.080e-10064.94Argininosuccinate lyase (Fragment) n=1 Tax=Caldili... [more]
A0A7S2RZF7_9STRA4.050e-10065.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A540VMS0_9CHLR6.180e-10064.78Argininosuccinate lyase n=1 Tax=Litorilinea aeroph... [more]
A0A162PKV6_PHYB88.910e-9965.50Arginosuccinase n=1 Tax=Phycomyces blakesleeanus (... [more]
A0A7R9WG83_9STRA1.200e-9865.20Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000362Fumarate lyase familyPRINTSPR00149FUMRATELYASEcoord: 49..65
score: 61.7
coord: 7..34
score: 27.08
NoneNo IPR availablePRINTSPR00145ARGSUCLYASEcoord: 49..65
score: 80.79
coord: 84..103
score: 74.51
coord: 7..31
score: 47.6
NoneNo IPR availableGENE3D1.20.200.10coord: 1..133
e-value: 5.9E-27
score: 96.7
NoneNo IPR availableGENE3D1.10.40.30coord: 134..205
e-value: 1.2E-31
score: 110.4
IPR029419Argininosuccinate lyase, C-terminalPFAMPF14698ASL_C2coord: 137..204
e-value: 2.2E-24
score: 86.0
IPR022761Fumarate lyase, N-terminalPFAMPF00206Lyase_1coord: 1..74
e-value: 2.2E-21
score: 76.6
IPR009049Argininosuccinate lyasePANTHERPTHR43814FAMILY NOT NAMEDcoord: 1..227
IPR020557Fumarate lyase, conserved sitePROSITEPS00163FUMARATE_LYASEScoord: 49..58
IPR008948L-Aspartase-likeSUPERFAMILY48557L-aspartase-likecoord: 2..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:275891..280201 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.142.1mRNA_F-serratus_M_contig1002.142.1Fucus serratus malemRNAF-serratus_M_contig1002 275891..319695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.142.1 ID=prot_F-serratus_M_contig1002.142.1|Name=mRNA_F-serratus_M_contig1002.142.1|organism=Fucus serratus male|type=polypeptide|length=237bp
MDTVCDRDFVAEYLWWASLTLTHLSQLAEDLIIYNFTKGVSLSDAYSTGS
SLMPQKKNPDALELLRGKAGRIIGHLSGFLATLKGLPRTYNKDLQEDKEP
LFDTAATVHDCLRIAAGVVATMTPNADNLRAQLVPEMLATDLADYLVRKG
VPFRETHHISGAAVKMAEDRGAPLDSLTPADLRTLHGAFEDDVQQVWDYE
TSVERKNAPGGTSRSSVTSQIEKVREYVASLPSEAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000362Fumarate_lyase_fam
IPR029419Arg_succ_lyase_C
IPR022761Fumarate_lyase_N
IPR009049Argininosuccinate_lyase
IPR020557Fumarate_lyase_CS
IPR008948L-Aspartase-like