prot_F-serratus_M_contig1002.139.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.139.1
Unique Nameprot_F-serratus_M_contig1002.139.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length271
Homology
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A0M2Q2L6_PROHO (50S ribosomal protein L10 n=1 Tax=Prochlorothrix hollandica PCC 9006 = CALU 1027 TaxID=317619 RepID=A0A0M2Q2L6_PROHO)

HSP 1 Score: 70.1 bits (170), Expect = 6.000e-11
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   51 SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNI-PEGCTARVVKNKLMRIAAKDTD-FEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKI 205
            S + K + V ++   L +  L      A LS +E+ QLR ++ P G + +V KN LMRIA +D + ++ + +   G N ++ ++  D+L   IK  Q F K    K  I      RGG  +   +    + A+++LPTK ELY RIA  +  IPTK+
Sbjct:    4 SPSNKREIVADLKAQLDQCLLAIVVDYAGLSVSEITQLRDSLYPLGASCKVTKNTLMRIAIEDNETWKPMQQFLNGTNAFLLIQ--DDLPGAIKAYQAFQKAT-KKTAI------RGGAMEGTALSDQQIAALTELPTKEELYARIAGGIKAIPTKL 151          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A348UTG2_9DELT (50S ribosomal protein L10 n=8 Tax=Desulfobacter TaxID=2289 RepID=A0A348UTG2_9DELT)

HSP 1 Score: 69.7 bits (169), Expect = 6.330e-11
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 0
Query:   55 KAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPT 203
            K + VE ++  L  + + F      L+ ++V +LR  + E G    VVKN LMR+AAK T  E + ++  G N  I   S+D+   P K I +F K     EK+      +GG    K +    V  ++K+P+K EL  ++   LN +PT
Sbjct:    7 KKELVENLAKELGDAEISFLVDYKGLTVSQVTELRAKLREVGAQMAVVKNTLMRLAAKGTGSEVLIDLFKGPNAIIL--SKDDPVAPAKVISEFLKT---NEKV----QLKGGALGGKFLSPEDVTQLAKMPSKEELLAKLVYTLNAVPT 147          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A521G4R1_9DELT (50S ribosomal protein L10 n=1 Tax=Candidatus Electronema sp. GS TaxID=2005002 RepID=A0A521G4R1_9DELT)

HSP 1 Score: 69.7 bits (169), Expect = 6.460e-11
Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 0
Query:   52 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            R  K   V E+ D   ++          L   E+ +LR+++ E     ++ KN L+RIAAKDT++E + +  TG     F   E     P K + +F K     +        R  +F+ K + G  +IA+SKLP+KH+L  ++   L  +PTK+ R+
Sbjct:    3 RESKVLKVNELKDTFTRAKFAAVADYQGLKVTELEKLRISLREQNAQLQIAKNTLLRIAAKDTEYEGLQQDFTGTTVVAFGFEEP--VGPAKALAEFNKEFAKLQ-------LRAAMFEGKRMSGEQIIALSKLPSKHQLLGQLCGVLAAVPTKLVRT 151          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A1W1XXF6_9DELT (50S ribosomal protein L10 n=1 Tax=Desulfacinum hydrothermale DSM 13146 TaxID=1121390 RepID=A0A1W1XXF6_9DELT)

HSP 1 Score: 68.9 bits (167), Expect = 1.210e-10
Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 0
Query:   52 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            +A K + V E+ + L+++S    T    L+  E+  LR N+ E G   RVVKN LMRIAAK T  E V  + TG N  + +  ED  A+  K +++FAK  D  +        +GGV     +    V A+++LP++ E+       LN +PT + R
Sbjct:    3 KAKKEQLVAELHEKLQRASAAVLTDFKGLTVAEITALRDNLAEQGVEYRVVKNTLMRIAAKGTTAEVVEPLLTGTNA-VAISYEDPSALA-KALKNFAKETDKFQ-------IKGGVLGSNPLSPQDVEALAELPSREEMLATFLGTLNAVPTGLVR 150          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: B4WIK4_SYNS7 (50S ribosomal protein L10 n=2 Tax=Cyanobacteria TaxID=1117 RepID=B4WIK4_SYNS7)

HSP 1 Score: 68.6 bits (166), Expect = 1.640e-10
Identity = 50/153 (32.68%), Postives = 71/153 (46.41%), Query Frame = 0
Query:   53 AGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTK 204
            A K   V E+ DLL  S   F      LS  ++  LR  + E G T ++ KN L++ A  D D  +  E    G   + +  ED +   +K  + F K     E        RGGV + KL+      A++ LPTK ELY +IAV +N + TK
Sbjct:    6 ANKQALVAEMKDLLEASESAFVIDYKGLSVAQISDLRGRLRESGATCKISKNTLLKRAIADQDQWQELESLLTGTSAVLLTKED-IGSAVKAYKKFQKDTKKTE-------LRGGVLEGKLLSQKDAEALADLPTKDELYAKIAVGINAVATK 150          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0M2Q2L6_PROHO6.000e-1133.1250S ribosomal protein L10 n=1 Tax=Prochlorothrix h... [more]
A0A348UTG2_9DELT6.330e-1132.0050S ribosomal protein L10 n=8 Tax=Desulfobacter Ta... [more]
A0A521G4R1_9DELT6.460e-1129.7550S ribosomal protein L10 n=1 Tax=Candidatus Elect... [more]
A0A1W1XXF6_9DELT1.210e-1033.7650S ribosomal protein L10 n=1 Tax=Desulfacinum hyd... [more]
B4WIK4_SYNS71.640e-1032.6850S ribosomal protein L10 n=2 Tax=Cyanobacteria Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 51..149
e-value: 1.9E-15
score: 56.8
IPR001790Ribosomal protein L10PPANTHERPTHR11560FAMILY NOT NAMEDcoord: 32..221
NoneNo IPR availableGENE3D3.30.70.1730coord: 50..184
e-value: 1.1E-24
score: 89.1
NoneNo IPR availablePANTHERPTHR11560:SF839S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 32..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.78
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 52..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:248774..261958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.139.1mRNA_F-serratus_M_contig1002.139.1Fucus serratus malemRNAF-serratus_M_contig1002 248374..262207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.139.1 ID=prot_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MRAILILIAFYVSGAQAFFGTPLRPISSSASPSRPHSCAQSRMSGTGYAS
SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARV
VKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKR
MDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNL
IPTKIGRSIKLVPTKVGRAVKLAFAEEGEGGDGSEGAAAEEAPAAAEAAT
PEGEAAADPPVAAEEVPATE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P