prot_F-serratus_M_contig1002.139.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.139.1
Unique Nameprot_F-serratus_M_contig1002.139.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length271
Homology
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A1X6NXG2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXG2_PORUM)

HSP 1 Score: 102 bits (253), Expect = 1.780e-22
Identity = 59/167 (35.33%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   42 RMSGTGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            RM G G  ++ +GKA  +E V +LL+ +  +F+ P+  L+ ++V +L+ ++PE      VKN LMR A   T F+    +T G N W FV+ +  +   +  ++ F+K    KE  G   P  GGV + ++ D  GV+A+S++PTK ELY +IA  +  +PTK+ +S
Sbjct:   45 RMDGLGNPANLSGKAAVIETVEELLKDTEFLFSAPLPGLTVSQVAELKNSLPEVTKVMTVKNTLMRKAIAGTPFDVAEPLTAGSNMWFFVKGD--IKESVAPLKAFSKTYKLKE-FG---PL-GGVLEGEVFDNKGVLAVSEMPTKKELYGQIAFLIQAVPTKLAKS 204          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S4EQC8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQC8_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.700e-22
Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = 0
Query:   46 TGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEV-CEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            +G+A++  GK   V+ V +LL  S ++F+ P   ++  E   LR ++PEG T  VVKN LMR A + T++EE    +  G N W F+E  +++   IK    F K     E         GG+ +    D  G+ AI KLP+K ELY +IA  +N +PTK+ R
Sbjct:   36 SGFATTVEGKKVKVDAVKELLDTSQMIFSVPAGEVTVAESQTLRRSMPEGTTISVVKNTLMRRATEGTEYEEATAPLLKGPNMWFFIE--EDIGASIKAWNAFTKEAAKTET----HSINGGIVEGTNYDAAGIEAIGKLPSKKELYAKIAAGVNAVPTKLAR 192          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: K0STH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC)

HSP 1 Score: 101 bits (251), Expect = 2.550e-21
Identity = 61/161 (37.89%), Postives = 88/161 (54.66%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            G A++  GK   V  V +LL  S +VF  P + ++  +V  LR ++PEG TA+VVKNKLM  A + T++E V EM  G N W F+E  +++   +K  + F K     E +       GG  +    D  GV  ISKLP+K EL  +IA  +  +PTK+ R
Sbjct:  160 GGATTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIE--EDIGGSVKSWKKFVK----DEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTKVAR 314          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S0NQ63_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQ63_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 1.190e-17
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 0
Query:   23 LRPISSSASPSRPHSCAQSRMSGTGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTD---FEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            L P S S S  R  + A++       A + A K K +E V +++ +S L+F      L  N++ +LR  +P+G   + VKN L+ +A ++ +      + E+    N+W FV  E  +   +K   D+ K    + +I       GGVF  +L+DG G+ A+SKLPTK EL  + A  L  +PTK+ RS
Sbjct:   19 LLPASLSLSSGRTTTPARTSQPSMAGALALAKKTKVLESVHEVMAESQLMFCVRSEGLQVNQLNELRQKLPDGVVLKCVKNTLINLAVREHEQFNAPNIEELLQYSNYWFFVP-ETQMRESVKVWNDWLKENKKENEI------MGGVFGAELLDGNGIEAVSKLPTKQELMGKTASLLKCLPTKLARS 200          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: R1EH59_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EH59_EMIHU)

HSP 1 Score: 89.4 bits (220), Expect = 1.210e-17
Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = 0
Query:   49 ASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGG-----NFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            A++ A K   +E V + +  S+L+F      L  NE+  LR+ +PEG   + VKN L+ IAAKD  FE+       G     N+W F  +E  +   IK  + F +    KE         GG+FD +++DG GV A+SKLPTK EL  + A+ L  +PTK+ RS
Sbjct:   45 AAALAKKTTVLEGVKENMDGSALMFCVRSEGLRVNELNDLRMKLPEGVRLQCVKNTLVNIAAKD--FEQFNAEGLDGLLHYSNYWFFA-TEAGMRDSIKVWKTFTEESGRKES----GEIVGGIFDAQVLDGKGVEAVSKLPTKQELMGKTALLLKALPTKLARS 202          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S0U7M7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U7M7_HEMAN)

HSP 1 Score: 85.5 bits (210), Expect = 2.240e-16
Identity = 49/153 (32.03%), Postives = 86/153 (56.21%), Query Frame = 0
Query:   55 KAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            K + V  V D L  ++L+F+T +  ++  E+  LR ++PEG  A V+KN+L++ A + + + EV +M T  N W+ ++  D+L   IK  + + K    + K G      GG+ +  + D  G+ A+ +LP+K ELY +IA  +  +PT + R
Sbjct:   51 KEEIVNNVRDRLESATLIFSTGLEGINMPEINALRNSLPEGTNAMVIKNRLLKRAVRGSPWIEVNDMATQSNLWLVID--DDLQGSIKAFKKWGK----ETKKG---DINGGIMEGVVYDSKGIDALGELPSKDELYAKIAGGIAALPTNLAR 194          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A061SDW1_9CHLO (Large subunit ribosomal protein L10 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SDW1_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 2.550e-14
Identity = 47/163 (28.83%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   51 SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKD---TDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEK---IGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            SR  K + V+++   L  S LVF    + ++  ++  LR  +PE  +  V KN LMR+A +    T ++++ + T+  N W+F   E+++A  +K +    K +  + K   +G      GGV D + +    +  +  +PTK +LYQ+ AV +  +PT+IG+
Sbjct:   45 SRQKKEEIVKKIQGKLDDSMLVFGMRFSKMTVKQMEGLRRELPEESSMIVAKNTLMRVATESDGYTQWKDIDQCTSQDNVWVF-SPEEHVADTVKKLSKLTKALSKEYKASGLGPSGEITGGVMDGRFLTENEIYKLESMPTKKDLYQKAAVGIKAVPTRIGK 206          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A4P8L299_9DELT (50S ribosomal protein L10 n=1 Tax=Desulfoglaeba alkanexedens ALDC TaxID=980445 RepID=A0A4P8L299_9DELT)

HSP 1 Score: 71.2 bits (173), Expect = 1.730e-11
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 0
Query:   52 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPT 203
            R+ K + +EE+ + L+++S    T    LS  E+ QLR ++ E G   RVVKN LMR+AAKDTD   +    TG N        D+ +VP K ++ + K  D K KI      + G   ++L+    V A++ LP++ EL  ++   LN +PT
Sbjct:    3 RSRKQELIEELREKLQRASASVLTDYKGLSVAEITQLRDSLAEQGVEFRVVKNTLMRLAAKDTDAAVLEPFLTGTN--AVALGYDDPSVPAKILRKYGKTND-KLKI------KCGALGRRLLTMEQVGALADLPSREELLAKLLGTLNAVPT 146          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A1M5IZP9_9DELT (50S ribosomal protein L10 n=1 Tax=Desulfacinum infernum DSM 9756 TaxID=1121391 RepID=A0A1M5IZP9_9DELT)

HSP 1 Score: 70.1 bits (170), Expect = 4.580e-11
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   52 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            RA K + V E+ + L+++S    T    L+  E+  LR N+ + G   +VVKN LMRIAAK T  E V  + TG N  + +  +D  A+  K ++ FAK  D  +        +GGV   K +    V A++ LP++ E+  ++   LN +PT + R
Sbjct:    3 RAKKEQLVAELHEKLQRASAAVLTDFKGLTVAEITALRDNLAQQGVEYKVVKNTLMRIAAKGTAAEVVEPLLTGTNA-VAISYQDPSALA-KVLKKFAKEKDKFQ-------IKGGVLGTKALSAQDVEALADLPSREEMLAKLLGTLNAVPTGLVR 150          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A109LUB5_9SPHN (50S ribosomal protein L10 n=2 Tax=unclassified Erythrobacter TaxID=2633097 RepID=A0A109LUB5_9SPHN)

HSP 1 Score: 69.7 bits (169), Expect = 5.960e-11
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 0
Query:   52 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            R+ KA AV ++SD+  ++ +V  T    L+  +  +LR  + E G T +V KN+L ++A KDTD+  + E  TG     +  SED +A   K + DFAK  D  E IG       G    + +D  GV A++ +P+  EL   I   LN   TK+ R+
Sbjct:    3 RSQKADAVAQLSDVFSQAGVVVVTRNLGLTVEQSTELRSKMREAGATYKVAKNRLAKLALKDTDYAGIDEYLTGPTALGY--SEDPVAAA-KAVVDFAKTTDKIEIIG-------GSMGAQKLDEAGVKALASMPSLDELRGTIVGLLNAPATKVVRT 150          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X6NXG2_PORUM1.780e-2235.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S4EQC8_9STRA3.700e-2236.20Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
K0STH8_THAOC2.550e-2137.89Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S0NQ63_9EUKA1.190e-1732.28Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
R1EH59_EMIHU1.210e-1736.97Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S0U7M7_HEMAN2.240e-1632.03Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A061SDW1_9CHLO2.550e-1428.83Large subunit ribosomal protein L10 n=1 Tax=Tetras... [more]
A0A4P8L299_9DELT1.730e-1134.6450S ribosomal protein L10 n=1 Tax=Desulfoglaeba al... [more]
A0A1M5IZP9_9DELT4.580e-1133.1250S ribosomal protein L10 n=1 Tax=Desulfacinum inf... [more]
A0A109LUB5_9SPHN5.960e-1134.1850S ribosomal protein L10 n=2 Tax=unclassified Ery... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 51..149
e-value: 1.9E-15
score: 56.8
IPR001790Ribosomal protein L10PPANTHERPTHR11560FAMILY NOT NAMEDcoord: 32..221
NoneNo IPR availableGENE3D3.30.70.1730coord: 50..184
e-value: 1.1E-24
score: 89.1
NoneNo IPR availablePANTHERPTHR11560:SF839S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 32..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.78
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 52..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:248774..261958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.139.1mRNA_F-serratus_M_contig1002.139.1Fucus serratus malemRNAF-serratus_M_contig1002 248374..262207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.139.1 ID=prot_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MRAILILIAFYVSGAQAFFGTPLRPISSSASPSRPHSCAQSRMSGTGYAS
SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARV
VKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKR
MDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNL
IPTKIGRSIKLVPTKVGRAVKLAFAEEGEGGDGSEGAAAEEAPAAAEAAT
PEGEAAADPPVAAEEVPATE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P