prot_F-serratus_M_contig1002.134.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.134.1
Unique Nameprot_F-serratus_M_contig1002.134.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1201
Homology
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Match: A0A5A8CTN8_CAFRO (UBC core domain-containing protein n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CTN8_CAFRO)

HSP 1 Score: 196 bits (498), Expect = 9.280e-47
Identity = 105/245 (42.86%), Postives = 150/245 (61.22%), Query Frame = 0
Query:  259 RLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPEDTPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLSLLGTW-SGSPEMMWSSNASLL-QVLLSLQTFILGAQYPYFNEPGVELDFGHDGAMDRARTSPNGGYEVLRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKWHILGVMGDWLRE-----SKRPGGLVGHYRDLVASLQSLLKELIRLSASMGD 496
            R+ ++L+ +A+ LP+ W S+I +R D  RP+++KA+I  P+DTPYDSG++ FD+Y    YP+  P  N++ TG GR RF+PNLYA G VCLSLLGTW  G     W++  S L QVL+S+Q  IL  ++P+ NEPG E + G       AR + NGGYE++R  TV  AM + L+ PP GFE   REH   K+ +IL  +  W  E     +KR      H ++L  ++ +L +EL +L  S  D
Sbjct: 6101 RVKKDLKQMAQSLPIGWESSILLRYDSRRPYMMKAVIFGPDDTPYDSGVYVFDIYTGATYPSTAPHCNIVNTGGGRFRFNPNLYANGKVCLSLLGTWRGGGASEEWNAKTSTLWQVLVSIQALIL-VKFPWANEPGYEEEIGTPKGDHNARYAENGGYEIIRRGTVRHAMVDMLKHPPTGFEKEVREHFRLKRRYILRTLARWQAEGADSENKR------HPQELATAISALKEELDKLGPSPCD 6338          
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Match: UPI000F65B119 (LOW QUALITY PROTEIN: baculoviral IAP repeat-containing protein 6-like n=2 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F65B119)

HSP 1 Score: 195 bits (495), Expect = 1.410e-46
Identity = 131/336 (38.99%), Postives = 172/336 (51.19%), Query Frame = 0
Query:  240 HHFWGVAEAEGSV-PSTRQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPEDTPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWS-SNASLLQVLLSLQTFILGAQYPYFNEPGVELDFGHDGAMDRARTSPNGGYEV-LRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKWHILGVMGDW------LRESKRPGGLVGHYRDLVASLQSLLKELIRLSASMGDCRYSPPXXXXXHP--PYLLPSLSWA---EVHDAVNPRR------AEYFAARRGMFGPEAGPPSNDQKKST 555
            HH+ G     G +  S R +RL +E  +L+  LPL + S++ VR D DR  ++K +I  PEDTPY +G FEFDVY P  YP  P  +NL TTG GRVRF+PNLY  G VCLS+L TW G PE  W+   +SLLQVL+S+Q+ I  ++ PYFNEPG E   G   AM  +R      Y+  +R +TV WAM   LR P   F+     H W K   IL  +  W      L E++R G  + H    +     LLKE  R        + SPP      P  P L+ S S +   +  DA  P +       E     RG  G +AG P   + + T
Sbjct: 1570 HHYEGSVRGAGDLCTSRRMKRLAQEAVTLSTSLPLSYSSSVFVRTDLDRLDIMKVLITGPEDTPYANGCFEFDVYFPVDYPTSPLHINLQTTGEGRVRFNPNLYQDGKVCLSILNTWHGRPEEKWNPQTSSLLQVLVSIQSLIFVSE-PYFNEPGYERSRGTPAAMQNSRE-----YDANIRAATVRWAMLNQLRNPSPCFKEVIERHFWLKHKEILEQIEAWIADMETLSENRRAGKNIAHNTVGLKKNFQLLKEEFR--------KMSPPPGLEGVPLTPSLVNSCSRSPAQQPRDANTPEKEREGAQGETEKEMRGAAGGQAGGPVRTRIRKT 1891          
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Match: A0A7S4L4T1_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L4T1_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 1.470e-46
Identity = 100/233 (42.92%), Postives = 143/233 (61.37%), Query Frame = 0
Query:  256 RQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPEDTPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWS-SNASLLQVLLSLQTFILGAQYPYFNEPGVELDFGHDGAMDRARTSPNGGYEVLRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKWHILGVMGDWLRESKRPGGLVGHYRDLVASLQSLLKEL 487
            + RR+++E  SLA  +P++  S++ VRVDE+RP +++A+I  PE TPY +G F FD++C   YP   P+VNL TTG G VRF+PNLY CG VCLSLLGTWSG     W  ++++LLQVL+S+Q+ I  ++ PY+NEPG E          R +T+ +   + +R  T++WA+ + L+ P  GFE   R H+  KK  +L    DWL E    G         + SL+ LL EL
Sbjct:  186 KMRRIIKEQASLAVNVPIHPSSSVFVRVDENRPDVMQALITGPEKTPYQNGCFLFDIHCYGNYPKNCPKVNLSTTGHGTVRFNPNLYNCGKVCLSLLGTWSGGANEGWDPASSTLLQVLVSIQSLIFVSE-PYYNEPGYESQMN----SIRGKTASHSYSKNIRLRTMQWAIVDQLKNPSPGFEDVIRTHMKLKKEELLKQGKDWLGEHGSEGSKA------LQSLKELLDEL 407          
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Match: A0A2K3DI78_CHLRE (UBC core domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DI78_CHLRE)

HSP 1 Score: 194 bits (493), Expect = 1.490e-46
Identity = 109/255 (42.75%), Postives = 146/255 (57.25%), Query Frame = 0
Query:  240 HHFWGVAEAEGSVPSTRQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPEDTPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWSSNASL-LQVLLSLQTFILGAQYPYFNEPGVELDFGHDGAMDRARTSPNGGYEVLRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKWHILGVMGDWLRESKRPGGLVGHYRDLVASLQSLLKELIRLSAS 493
            HH+   A  E + P  R  RL +E+ SL   LPL    ++ VRVDE    L KA++A PEDTPY  GLF FD+Y PPQYP VPP+V+LMTTG GRVRF+PNLYA G VCLSLLGTW G     W+++ S  +QVL+S+Q+ I+    PY+NEPG E         +R R +     + +R + + +AM + LR PP  F    R H   ++ H+L  +  W  E+       GH     A +  + KEL  L A+
Sbjct: 1060 HHYASNARGEPANPRPRSVRLAKEVASLESLLPLSAAGSVFVRVDEGCVQLWKALVAGPEDTPYGGGLFLFDLYFPPQYPGVPPQVHLMTTGGGRVRFNPNLYAEGKVCLSLLGTWQGDKGEQWNADVSTAVQVLISIQSLIMVPD-PYYNEPGYEAQM-----QERGRVASRDYNKNVRENNIRYAMLDMLRHPPAAFAEVVRAHFRLRRAHLLDQIRRWAEET------AGHDAAAAARMTDMRKELELLIAA 1302          
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Match: UPI001FB6E510 (baculoviral IAP repeat-containing protein 6-like isoform X9 n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB6E510)

HSP 1 Score: 195 bits (496), Expect = 1.540e-46
Identity = 131/336 (38.99%), Postives = 172/336 (51.19%), Query Frame = 0
Query:  240 HHFWGVAEAEGSV-PSTRQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPEDTPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLSLLGTWSGSPEMMWS-SNASLLQVLLSLQTFILGAQYPYFNEPGVELDFGHDGAMDRARTSPNGGYEV-LRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKWHILGVMGDW------LRESKRPGGLVGHYRDLVASLQSLLKELIRLSASMGDCRYSPPXXXXXHP--PYLLPSLSWA---EVHDAVNPRR------AEYFAARRGMFGPEAGPPSNDQKKST 555
            HH+ G     G +  S R +RL +E  +L+  LPL + S++ VR D DR  ++K +I  PEDTPY +G FEFDVY P  YP  P  +NL TTG GRVRF+PNLY  G VCLS+L TW G PE  W+   +SLLQVL+S+Q+ I  ++ PYFNEPG E   G   AM  +R      Y+  +R +TV WAM   LR P   F+     H W K   IL  +  W      L E++R G  + H    +     LLKE  R        + SPP      P  P L+ S S +   +  DA  P +       E     RG  G +AG P   + + T
Sbjct: 4768 HHYEGSVRGAGDLCTSRRMKRLAQEAVTLSTSLPLSYSSSVFVRTDLDRLDIMKVLITGPEDTPYANGCFEFDVYFPVDYPTSPLHINLQTTGEGRVRFNPNLYQDGKVCLSILNTWHGRPEEKWNPQTSSLLQVLVSIQSLIFVSE-PYFNEPGYERSRGTPAAMQNSRE-----YDANIRAATVRWAMLNQLRNPSPCFKEVIERHFWLKHKEILEQIEAWIADMETLSENRRAGKNIAHNTVGLKKNFQLLKEEFR--------KMSPPPGLEGVPLTPSLINSCSRSPAQQPRDANTPEKEREGAQGESEKEMRGASGGQAGGPVRTRIRKT 5089          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CTN8_CAFRO9.280e-4742.86UBC core domain-containing protein n=7 Tax=Cafeter... [more]
UPI000F65B1191.410e-4638.99LOW QUALITY PROTEIN: baculoviral IAP repeat-contai... [more]
A0A7S4L4T1_9EUKA1.470e-4642.92Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
A0A2K3DI78_CHLRE1.490e-4642.75UBC core domain-containing protein n=1 Tax=Chlamyd... [more]
UPI001FB6E5101.540e-4638.99baculoviral IAP repeat-containing protein 6-like i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 258..431
e-value: 6.6E-9
score: 45.6
NoneNo IPR availablePANTHERPTHR46116FAMILY NOT NAMEDcoord: 127..471
NoneNo IPR availablePANTHERPTHR46116:SF6BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 6-RELATEDcoord: 127..471
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 184..494
e-value: 2.2E-63
score: 216.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 241..393
IPR019309WASH complex subunit 3PFAMPF10152CCDC53coord: 693..777
e-value: 6.1E-8
score: 33.2
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 261..385
e-value: 1.9E-19
score: 69.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 258..380
score: 20.553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:185652..195686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.134.1mRNA_F-serratus_M_contig1002.134.1Fucus serratus malemRNAF-serratus_M_contig1002 184509..195801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.134.1 ID=prot_F-serratus_M_contig1002.134.1|Name=mRNA_F-serratus_M_contig1002.134.1|organism=Fucus serratus male|type=polypeptide|length=1201bp
MVTAFGPPVVSPAAPGGAAPPAELAVSPGDPGWTSIPPPPPLPQALKPAL
APPASNSVAPGGGMGSSQGSVAGLGLGMPTERYPWVTTQQREALEHEQGT
TLAKLARSALARSKAAVGAAAALDVARTDKIGGTVSARSAKIADGNGSGN
GAAEVTANGGVAKLGGDKAGSEVVTPEGADEEPSEEALYVDAMAGLQFDT
MRMEVVSPGEDGIARSDEDKANQGPQLQQQQQPRKPRQRHHFWGVAEAEG
SVPSTRQRRLVRELRSLARELPLYWGSTIAVRVDEDRPHLLKAMIAAPED
TPYDSGLFEFDVYCPPQYPAVPPRVNLMTTGRGRVRFSPNLYACGNVCLS
LLGTWSGSPEMMWSSNASLLQVLLSLQTFILGAQYPYFNEPGVELDFGHD
GAMDRARTSPNGGYEVLRPSTVEWAMTEALRFPPRGFEAFAREHLWRKKW
HILGVMGDWLRESKRPGGLVGHYRDLVASLQSLLKELIRLSASMGDCRYS
PPPPPPPHPPYLLPSLSWAEVHDAVNPRRAEYFAARRGMFGPEAGPPSND
QKKSTRNGAGDGGAGECKGGEGRPGDDDNHGLSDSAKERPSPAGDKPRRS
SSSPTKHELPLRRRRRRGRHRPRQRQRTLGDGVDDDDDEEGEEEEESPFL
HTPEEKTWESPAEARERLELRLQVAARALDVATAAAAAAADTMTRVGSRR
PEAWVTVAGRAARAAGVGALHGRALPADEAKAGGQAGVTWSTHPQFLKYF
KLLRLGVPREEVIAKAVRSGVDPSILDHPDERIPFDPQYSVASPCAPLLR
VSPDLDSVPVAQLTTGSGTIYTAKPTRALGNAIAHQSPSSPDGHPPDATV
STPAPSAVKGEGCGNEKESSPAYQTAAKSEPQAGGSSSRSVSPSEHPLVL
SGRRVWVVSPVVGWASVWTETGQIILSPAGADGESGGNENGVGSGHGAAG
GKRGPKKSQSIVSAGGVKGKEGGDGEGVSAAGSSLDVYGAHAGFANSSLE
VAGMGKNGHSSSGPLLSYPSFPPAPLPPLDCPPSQASTLVVPADGDHPSQ
QLPKGDHNHPPHWMPSPPNNASGTNPSAILEAALVPSSGQSMPPKSSWVT
LPPQPTGTAQIPNIAPAAGPGPLSGAAQLAAFSSATDGEQGLEKKGFLEA
EPEKIVVQGGGGIVGGIQMPHATSQWGVGPGGNETFGTKNNDNDEAKKTE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR019309WASHC3
IPR000608UBQ-conjugat_E2