prot_F-serratus_M_contig1002.132.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.132.1
Unique Nameprot_F-serratus_M_contig1002.132.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length284
Homology
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 6.390e-90
Identity = 137/178 (76.97%), Postives = 158/178 (88.76%), Query Frame = 0
Query:  106 MAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFRSRTKRTVLHQVCHI 283
            MA+ LL+++DMR +S+GTG  V+LPGK+SKSPQSF FGTPY+EI D L R +EALFRRNSVL LLER+A TKRAPERWQ+L+   VASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSA DSAAAA DVL+LCKML+ C+DL++ A++LLN FR R+KRTVLHQVCHI
Sbjct:    1 MAEILLKEHDMRAQSFGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSANDSAAAAGDVLDLCKMLEDCDDLDSNAAELLNDFRIRSKRTVLHQVCHI 178          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.310e-72
Identity = 117/195 (60.00%), Postives = 153/195 (78.46%), Query Frame = 0
Query:   89 SKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFRSRTKRTVLHQVCHI 283
            SKR FAVVCS+N NRS+MA KLL++++ + +SYGTG  V+LPGK+  SP+ F FGTPY +I D L   DEALF +N++L L+ R+A+ K AP+R+Q +E  ++A FDVV+CFE+RVF LVVEDLQ RDP+TFKPLHV++MTI+DS E+SAAAA  VLELC+MLD    L+ E + +L  F  +TKRTVLHQVCH+
Sbjct:  198 SKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEDLQSRDPETFKPLHVINMTIKDSFEESAAAADSVLELCRMLDGVSQLDDETAGVLEVFTRKTKRTVLHQVCHV 392          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A835Z2K1_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K1_9STRA)

HSP 1 Score: 211 bits (538), Expect = 2.360e-65
Identity = 98/189 (51.85%), Postives = 137/189 (72.49%), Query Frame = 0
Query:   95 VVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFRSRTKRTVLHQVCHI 283
            +VCSSN+NRS++ Q +LEK +M   S+G G+ VKLPG++   P  F FGTPY+E+HD L   D+ L+ RN VL LL RDA TKR PERWQ L S  V ++DVV+CFE+R+FD+ V+DLQ RD   FKP+ ++S+ ++D+ +D+  A  DV  LC+ML+ACEDL ++ S ++  F+  TKR +LHQVCH+
Sbjct:    1 MVCSSNVNRSVLGQIVLEKMNMAVSSFGVGTDVKLPGRSRGEPAVFPFGTPYIEMHDILWAADKQLYTRNGVLRLLARDACTKRHPERWQDLPSAAVVAYDVVICFENRIFDICVQDLQDRDALDFKPISLISVPVKDTPQDAEEAMEDVTSLCEMLEACEDLESDVSGIVEAFQETTKRAILHQVCHL 189          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 3.130e-55
Identity = 101/156 (64.74%), Postives = 121/156 (77.56%), Query Frame = 0
Query:   67 EEWRKVAEGILAGGPVRVG----------KGTSKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDL 212
            E WR  A  IL+ G    G           G+S++SFAVVCSSN+NRSIMA+ LL+++D+R +SYGTG  V+LPGK+SKSPQSF FGTPY+EI D L R +EALFRRNSVL LLER+A TKRAPERWQ+L+ + VASFDVVVCFESRVFDLVVE +
Sbjct:  108 EGWRAAANAILSAGVKEDGAGSRSSKGESSGSSRKSFAVVCSSNVNRSIMAEILLKEHDIRAQSYGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEGI 263          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A7S2Y8T2_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=4 Tax=Naviculales TaxID=38748 RepID=A0A7S2Y8T2_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.250e-50
Identity = 88/202 (43.56%), Postives = 134/202 (66.34%), Query Frame = 0
Query:   89 SKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDAL--VRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDP-DTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFR----SRTKRTVLHQVCHI 283
            SK SF VVCSSNINRS+ A  +L    +R +SYGTG++V+LPG+ +  P+ F FGTPY E+H ++     D   F RN VL L +R A  KRAP+RWQ + S++++  ++V+ FE R+FD V+EDLQ R P + F+P+HV+ +  +D+  ++A      L LC  L+ CEDL+ EA+++++ F+    S T   +L+QVC++
Sbjct:   26 SKLSFGVVCSSNINRSMEAHVVLGNAGLRVESYGTGTQVRLPGRTAMEPRIFKFGTPYEEMHQSMNVTPEDTTYFTRNGVLQLCQRGAAVKRAPQRWQDMASEDISKHNIVIAFEERIFDAVIEDLQLRQPTEDFRPMHVICLDTKDNPHEAARQGIVALRLCWRLEHCEDLDLEAAEIIDEFQRERDSETNIKILYQVCYL 227          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A7S3L5X4_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5X4_9STRA)

HSP 1 Score: 173 bits (438), Expect = 9.460e-50
Identity = 90/202 (44.55%), Postives = 133/202 (65.84%), Query Frame = 0
Query:   89 SKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHD--ALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDP-DTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFR----SRTKRTVLHQVCHI 283
            SK SF  VCSSNINRS+ A  +L    +  +SYGTG++V+LPG+ +  P+ F FGTPY +++   A+   D+A F+RN VL L  R A  KRAP+RWQ + S+++A  DV++ FE R+FD VVEDLQ R+P   F P+HV+ +  +D+  ++A      L LC ML+  EDL TEA+++++ F+    S T   +L+QVC++
Sbjct:   27 SKLSFGTVCSSNINRSMEAHVVLGNAGLSVESYGTGTQVRLPGRTAMEPRIFKFGTPYEDMYASMAVTPEDQAYFQRNGVLQLCRRGAAVKRAPQRWQDVPSEDIAKHDVIIAFEERIFDAVVEDLQMREPTQEFAPMHVICLDTKDNPHEAARQGLVALRLCWMLEHAEDLTTEAAEIIDRFQEERSSETNIKILYQVCYL 228          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A7S2A5S7_TRICV (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5S7_TRICV)

HSP 1 Score: 170 bits (431), Expect = 1.800e-48
Identity = 92/210 (43.81%), Postives = 131/210 (62.38%), Query Frame = 0
Query:   81 PVRVGKGTSKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRV--DEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDP-DTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFR----SRTKRTVLHQVCHI 283
            P    +  S+ SF VVCSSNINRS+ A  +L    +R +SYGTG+ V+LPG+++  P+ F FGTPY E+H +L     DEA F  N VL L  R A  KRAP+RWQ + S+EV   DVV+ FE R+FD V+EDLQ R+P + F P+HVV +  +D+  ++       LELC +L+   DL  E  ++L+ F+    + T   VL+Q+C++
Sbjct:   37 PASSRRPLSRLSFGVVCSSNINRSMEAHVVLGNAGLRVESYGTGTTVRLPGRSAMEPRVFKFGTPYEEMHASLAATPDDEAFFTHNGVLQLCRRGAAVKRAPQRWQDVPSREVQKHDVVIAFEERIFDAVIEDLQMREPTEDFLPIHVVCLDTKDNPHEAKLQGRVALELCWLLEGANDLVLEMPEILDAFQEERMTHTPIKVLYQLCYL 246          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A7S1FXY9_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FXY9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.330e-48
Identity = 90/201 (44.78%), Postives = 130/201 (64.68%), Query Frame = 0
Query:   88 TSKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDP-DTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFR----SRTKRTVLHQVCHI 283
            +SK SF VVCSSNINRS+    +L    ++ +SYGTGS V+LPG+++  P+ F FGTPY +++++L   DEA F +N VL L  R +  K AP+RWQ   S  +AS DVV+ FE R+FD VVEDLQ RDP D F P+HV+ +  +D+  ++       LELC +L+   DL  EA +++  F+    S T+  VL+Q+C++
Sbjct:   43 SSKLSFGVVCSSNINRSMEGHVVLGNAGLKVESYGTGSTVRLPGRSAMDPRIFKFGTPYAQMYESLATEDEAFFFQNGVLQLCRRGSGVKVAPQRWQDTPSTAIASHDVVIAFEERIFDAVVEDLQTRDPTDDFAPIHVICLDTKDNPHEAHIQGRVCLELCWLLENAGDLVAEAPEIVENFQMVHMSHTQIKVLYQLCYL 243          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A6S8R8X9_9STRA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8R8X9_9STRA)

HSP 1 Score: 169 bits (428), Expect = 6.740e-48
Identity = 89/202 (44.06%), Postives = 132/202 (65.35%), Query Frame = 0
Query:   89 SKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRV--DEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDP-DTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFR----SRTKRTVLHQVCHI 283
            SK SF VVCSSNINRS+    +L    +R +SYGTG+ V+LPGK++  P+ F FGTPY E++++L     DEA F  N VL L  R A  K AP+RWQ + S  +A+ DVV+ FE R++D VVEDLQ R+P ++F+P+HV+ +  +D+  ++       LELC +L+A +DL  EA  ++  F+    + T+  VL+Q+C++
Sbjct:   55 SKLSFGVVCSSNINRSMEGHVVLGNAGLRVESYGTGTSVRLPGKSALEPRVFKFGTPYEEMYNSLAATPEDEAFFTHNGVLQLCRRGAAVKTAPQRWQDMSSDFIATHDVVIAFEERIYDAVVEDLQTREPTESFEPIHVICLDTKDNPHEAKLQGRVALELCWLLEAADDLVVEAPGIVESFQDERMTHTQIKVLYQLCYL 256          
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Match: A0A7S0QYP3_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYP3_9CHLO)

HSP 1 Score: 166 bits (420), Expect = 1.710e-47
Identity = 87/195 (44.62%), Postives = 125/195 (64.10%), Query Frame = 0
Query:   87 GTSKRSFAVVCSSNINRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIHDALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCFESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSAEDSAAAASDVLELCKMLDACEDLNTEASKLLNGFRSRTKRTVLHQVC 281
            G  K+ FA+VC+SN NRS+ A  +L+ N+ +  SYG G+ VKLPG N KSP ++ FGTPY  I+D L + DE L+ RN +L +LER+   K APERWQ    Q    FDVV+ FE  VF+ VVEDLQ RD  T   + VV++ ++DS +++A AA   + +C+ML+A ED  +E   +++ F+    R  L+ +C
Sbjct:    2 GNMKKRFAMVCASNQNRSMEAHCMLKNNNFQVSSYGVGAHVKLPGPNQKSPNTYPFGTPYQYIYDDLKKKDEELYIRNGLLPMLERNITVKTAPERWQDNRDQ----FDVVLTFEESVFEKVVEDLQNRDQSTGASVLVVNLDVKDSPQEAALAAPLAMNICEMLEASEDWESEVDLVVDRFQQTYGRRPLYTIC 192          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLZ3_9PHAE6.390e-9076.97RNA polymerase II subunit A C-terminal domain phos... [more]
A0A6H5KZG9_9PHAE1.310e-7260.00Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A835Z2K1_9STRA2.360e-6551.85RNA polymerase II subunit A C-terminal domain phos... [more]
D8LTB5_ECTSI3.130e-5564.74Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A7S2Y8T2_9STRA3.250e-5043.56RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S3L5X4_9STRA9.460e-5044.55RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S2A5S7_TRICV1.800e-4843.81RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S1FXY9_9STRA2.330e-4844.78RNA polymerase II subunit A C-terminal domain phos... [more]
A0A6S8R8X9_9STRA6.740e-4844.06RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0QYP3_9CHLO1.710e-4744.62RNA polymerase II subunit A C-terminal domain phos... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 160..283
e-value: 2.2E-31
score: 110.4
NoneNo IPR availableGENE3D3.40.50.2300coord: 86..144
e-value: 2.0E-10
score: 42.5
IPR006811RNA polymerase II subunit APFAMPF04722Ssu72coord: 92..282
e-value: 3.1E-58
score: 196.5
IPR006811RNA polymerase II subunit APANTHERPTHR20383FAMILY NOT NAMEDcoord: 90..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:160027..180012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.132.1mRNA_F-serratus_M_contig1002.132.1Fucus serratus malemRNAF-serratus_M_contig1002 158491..180423 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.132.1 ID=prot_F-serratus_M_contig1002.132.1|Name=mRNA_F-serratus_M_contig1002.132.1|organism=Fucus serratus male|type=polypeptide|length=284bp
MEEERPESQDKEVDSPPPSPAPVQPFAEETKEDANGEPTSLPSPVDGQTE
PEAKRRKKEVLEKGKKEEWRKVAEGILAGGPVRVGKGTSKRSFAVVCSSN
INRSIMAQKLLEKNDMRTKSYGTGSRVKLPGKNSKSPQSFAFGTPYLEIH
DALVRVDEALFRRNSVLALLERDAVTKRAPERWQALESQEVASFDVVVCF
ESRVFDLVVEDLQQRDPDTFKPLHVVSMTIRDSAEDSAAAASDVLELCKM
LDACEDLNTEASKLLNGFRSRTKRTVLHQVCHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006811RNA_pol_II_suA