prot_F-serratus_M_contig1001.127.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1001.127.1
Unique Nameprot_F-serratus_M_contig1001.127.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length439
Homology
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BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.690e-29
Identity = 85/283 (30.04%), Postives = 141/283 (49.82%), Query Frame = 0 
Query:  150 LQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAILSQG-----HSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYLTVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAA---KTFEDWVLSFTHMVAPEFCATFVAN------GDLSKVQSDQALLRIATPTAVVRLSVGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARVVLDAQGNKVMEGTDALPG 418
            + G RGQ  ++TG DGGWY  V  D   + +N+R  S +P+  P+  +ITG+ I +       H+ V+ V DP+++D+  C   VSPCLADG LTV +DG+    L  P  V+  P  + +S+ NLP ACR FG  + W R +++  RG R+L ++   +   DW+L          C  +V        G L +   +    +I TP   +R ++                     F  M + ++ ++++  + +G+LG T +  LDA G+ +M+G  ++ G
Sbjct:    1 MTGFRGQKFDFTGQDGGWY-SVHSDMPRIHLNMRARSLVPS-VPEITYITGLGITTTDANGLDHTIVITVTDPHSLDS-ACPVGVSPCLADGALTVQLDGKHA--LLAPGEVLFGP-QVAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAF----------------TSFPCMNLAIDRIDVSPNA-TGILGETQKPTLDANGSPIMQGMASIRG 260
[Close]
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Match: A0A6H5KHZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ2_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.460e-21
Identity = 43/102 (42.16%), Postives = 64/102 (62.75%), Query Frame = 0 
Query:  136 SVCACGVDVCFDPHLQGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITGVAI----------------------LSQGHSFVVEVK 215
            + C  G ++C DPH++GL GQ+I+W GVDGGWY  V+D + DL +NVR T+PLP +FPDRQ +TG+++                      +++GHS V+EV+
Sbjct:   32 AACPDGTNLCLDPHMKGLFGQNIDWFGVDGGWYSFVRDPDIDLNVNVRLTAPLPEEFPDRQLVTGLSVVXXXXXXXXXXXXXXXXXXXXXMARGHSLVIEVR 133
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L2W0_9PHAE4.690e-2930.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHZ2_9PHAE1.460e-2142.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..438
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.757

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1001contigF-serratus_M_contig1001:260889..262757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1001.127.1mRNA_F-serratus_M_contig1001.127.1Fucus serratus malemRNAF-serratus_M_contig1001 259720..268877 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1001.127.1 ID=prot_F-serratus_M_contig1001.127.1|Name=mRNA_F-serratus_M_contig1001.127.1|organism=Fucus serratus male|type=polypeptide|length=439bp
MFGTTSLCYLLLGGIAALGQAHAASKHTDVQLEILGSGTGEMIAAVSQDK
RSLQSSTIQSFDITITFINSINLDEGTSIDITFDGSSGPVGTVTVTAPAS
GETAFFEFCLDAAGETDISSGSDMDDTVLIIDIESSVCACGVDVCFDPHL
QGLRGQHIEWTGVDGGWYVLVKDDEDDLEINVRTTSPLPNDFPDRQFITG
VAILSQGHSFVVEVKDPYTVDTHGCSDDVSPCLADGGLTVSVDGEQVDYL
TVPTNVVHLPGDIEVSSSNLPPACREFGGRKVWARMQKDMLRGRRQLSAA
KTFEDWVLSFTHMVAPEFCATFVANGDLSKVQSDQALLRIATPTAVVRLS
VGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLNLNHESLSGLLGNTARV
VLDAQGNKVMEGTDALPGKITDYRVSDAEGTDFPLLHN*
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