prot_F-serratus_M_contig1001.121.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1001.121.1
Unique Nameprot_F-serratus_M_contig1001.121.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length226
Homology
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BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU)

HSP 1 Score: 57.4 bits (137), Expect = 8.010e-7
Identity = 35/104 (33.65%), Postives = 49/104 (47.12%), Query Frame = 0 
Query:  103 PDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSGKLVCAMCCSAGTFTMKLPGAET-YSTLPXXXXXXXXXXXXLNCRGDGRAVPRELDR 205
            P TV    E  + +AGG+VGV+GTL+ LE+ ++ +   R CPYC G  KL C +C   G     +P     Y                 +C G GR +P E +R
Sbjct:   47 PPTV---NEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLCYGMGF----IPDVSCLYCKSDCENCGGEGSVLCCHCDGSGRYLPVEYER 143
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1001.121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
M2Y0D2_GALSU8.010e-733.65Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852FAMILY NOT NAMEDcoord: 82..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.9
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 137..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1001contigF-serratus_M_contig1001:26439..31669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1001.121.1mRNA_F-serratus_M_contig1001.121.1Fucus serratus malemRNAF-serratus_M_contig1001 26391..32621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1001.121.1 ID=prot_F-serratus_M_contig1001.121.1|Name=mRNA_F-serratus_M_contig1001.121.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MDTTMSMLYIFVFVLLLSCPVARAFLASGWQEAASSQEVERSRHIPTSST
GFVAPSGTAELKGRKARDFRRERAYRRAAQRPERRVQSPGRDQKVAPLSA
LNPDTVYSAKEWIAGVAGGSVGVLGTLIQLELKQEALRSRRNCPYCNGSG
KLVCAMCCSAGTFTMKLPGAETYSTLPCPGCSGKRYITCLNCRGDGRAVP
RELDRKTGDAVDLRLEEIGMGSVGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf