prot_F-serratus_M_contig100.108.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig100.108.1
Unique Nameprot_F-serratus_M_contig100.108.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length331
Homology
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BLAST of mRNA_F-serratus_M_contig100.108.1 vs. uniprot
Match: D7G479_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G479_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 6.350e-80
Identity = 169/340 (49.71%), Postives = 203/340 (59.71%), Query Frame = 0 
Query:   12 GRGRKRKRQVSWAAAELLEEVKVFHMAKPVNPSVPPPAVDDGGEGGQNSASGSGQPGLALLGLLSVGASSS--------------PSSFPSSNTPAFSGTPSSNGANAAQQSSGSATASGAVQEGPAGGWSGASXXXXXXXXXXXXXXXGRVGGGGSRLFKGFQTTETVVRRKKPPPVTAST-----LPAETPSASPT-MYPKDVWPGHKPPSQKADGSSKGDVARGQGG-DGKAGADDELMEFFCDGCDVTIPNGVERMECVVCPDEFCFCQACYDAGELLDKKHEHDLLPSSAPFHITSAAPNAEAAAAAAQALHVTEEARNDQGGELDGGYDDEDLG 330
            GRGRKRKRQVSWAAAELLEEVK+FHMAKPVNPS+PPP VDDGGE   ++AS   QPGLALLGLL V +SSS              P+S  SS+T   +    +   N    S  S T++    +   G + G+S                    G SRLFKGF+ TETVVR                +P        T  YPKD+WPGHKPP+          +  G+G  DG+   D+E +EFFCDGCD TIP+GVERMEC VCPDEFC C ACYD GE+LDK+H+H+LLPS+APFH+T AAP+A AA  AA+ALHV E A + QG      YD+ DLG
Sbjct:   11 GRGRKRKRQVSWAAAELLEEVKLFHMAKPVNPSIPPPVVDDGGE---DAAS---QPGLALLGLLGVESSSSLPASTSSFSAASPSPASVDSSSTTFHAPVGGAGIVNGGDNSHPSTTSAQLPSDVQGGSFVGSSSHSGDGPGGTEGGPATGRTVGASRLFKGFEKTETVVRXXXXXXXXXXXXXXXXIPPSGEGEHVTHRYPKDIWPGHKPPNH---------IVGGEGANDGERAGDEEQLEFFCDGCDETIPSGVERMECAVCPDEFCLCHACYDEGEVLDKRHKHELLPSAAPFHVTRAAPSAAAALEAAKALHVAE-AHHGQGL----AYDEADLG 330
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig100.108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G479_ECTSI6.350e-8049.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.90coord: 229..283
e-value: 1.3E-6
score: 30.2
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 232..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig100contigF-serratus_M_contig100:439472..457118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig100.108.1mRNA_F-serratus_M_contig100.108.1Fucus serratus malemRNAF-serratus_M_contig100 439418..458073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig100.108.1 ID=prot_F-serratus_M_contig100.108.1|Name=mRNA_F-serratus_M_contig100.108.1|organism=Fucus serratus male|type=polypeptide|length=331bp
MTDTVSGSSSFGRGRKRKRQVSWAAAELLEEVKVFHMAKPVNPSVPPPAV
DDGGEGGQNSASGSGQPGLALLGLLSVGASSSPSSFPSSNTPAFSGTPSS
NGANAAQQSSGSATASGAVQEGPAGGWSGASSASSSFGAEGGGEGSGRVG
GGGSRLFKGFQTTETVVRRKKPPPVTASTLPAETPSASPTMYPKDVWPGH
KPPSQKADGSSKGDVARGQGGDGKAGADDELMEFFCDGCDVTIPNGVERM
ECVVCPDEFCFCQACYDAGELLDKKHEHDLLPSSAPFHITSAAPNAEAAA
AAAQALHVTEEARNDQGGELDGGYDDEDLG*
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