prot_F-serratus_M_contig10.76.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig10.76.1
Unique Nameprot_F-serratus_M_contig10.76.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length181
Homology
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 4.000e-56
Identity = 114/188 (60.64%), Postives = 126/188 (67.02%), Query Frame = 0
Query:    1 MAAMCDISFDEMAVALSYISLGRSKAGKKPAAKDRELPA---VSDPAPPATAPEXXXXXXXXXXXXDDEECGEPPAPKEESRAEKMALIKAAKDAKKKI-----IFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            MA  CDISFDEMA+ALSYISLG + A   PA+  R LP+   V      A  PE             D           ESRA+KMA  K AKDAKKKI     +FEVKPWDTE DLK LF KI   +IDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDV+E F++ VQSVDM TMN++
Sbjct:    1 MATACDISFDEMAMALSYISLGGTAAA--PASSARGLPSLAPVKQEKKAAKKPEADDEVDNLF----DXXXXXXXXXXXESRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 182          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 7.400e-50
Identity = 89/112 (79.46%), Postives = 97/112 (86.61%), Query Frame = 0
Query:   74 PKEESRAEKMALIKAAKDAKKK-----IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            P E+SRAEKMA  KAAKDAKKK     I+FEVKPWDTE DLK LF KI   KI+GLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDV+EGF++EVQSVDM TMN++
Sbjct:  121 PAEKSRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 3.330e-39
Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 0
Query:   78 SRAEKMALIKAAKDAKKK-----IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            SRAE+MA  K+AKDA KK     I+FEVKPW+   DLK LFDKI   +IDGLVWGEAHKLVPVAFGVKKLVLSCVV D KVGVEDITDV+E F++EVQSVDM TMN++
Sbjct:  742 SRAEQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A835ZFP2_9STRA (EF-1 guanine nucleotide exchange domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.390e-29
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    3 AMCDISFDEMAVALSYISLGRSKAGKKPAAKDRELPAVSDPAPPATAPEXXXXXXXXXXXXDDEECGEP-PAPKEESRAEKMALIKAAKDAKKKI-----IFEVKPWDTEVDLKALFDKITN-VKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNK 179
            A  DIS+DE+++AL Y +LG S +                         XXXXXXXX     DE+  E  P  K  SRAE+MA  KAAKD KKKI     ++EVKPW+ + DLKAL++KI     +DGL W E   L PVAFG+ KLV++C +EDDKVG+ DI+D++E  +++VQSVD+  M +
Sbjct:    2 AAFDISYDELSIALEY-ALGISTSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDFGDEDAEEAAPVAKGPSRAEQMAAAKAAKDKKKKIEMSNVVYEVKPWEADQDLKALYEKIKKECAMDGLRWSEGCTLAPVAFGINKLVIACTIEDDKVGLNDISDMIEALEDDVQSVDLINMQR 184          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: F0WC99_9STRA (EF1 guanine nucleotide exchange domaincontaining protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WC99_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.080e-27
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   77 ESRAEKMALIKAAKDAKKK--------IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            ES  +++   KAAK  K+K        ++ EVKPW+ E DL+AL  KI   KI+GL WGE HKLV VAFG+KKL++ CV+ DD V ++DITD +E F+ +VQSVD+ATMNKI
Sbjct:  115 ESARKRVDAAKAAKCKKEKAKPVERTSVVIEVKPWEAETDLEALAIKIKATKIEGLSWGEGHKLVDVAFGIKKLLVQCVIIDDMVALDDITDAIEKFEGDVQSVDVATMNKI 226          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A8J5I4Y8_9STRA (EF1_GNE domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5I4Y8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.210e-27
Identity = 54/102 (52.94%), Postives = 77/102 (75.49%), Query Frame = 0
Query:   80 AEKMALIKAAKDAKK-KIIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            A K+ L  + K  ++ +++ EVKPW+ E DL+ L  KI  + +DGL WGE HKLVPVAFG+KKL++ CV+ DD V ++DITD +EGF++ VQSVD+A+MNK+
Sbjct:   63 AAKLGLRASLKPVERSQVVIEVKPWEAETDLEELAAKIKALPVDGLTWGEGHKLVPVAFGIKKLLVQCVIIDDLVLLDDITDAIEGFEDYVQSVDVASMNKL 164          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A6G0WMX9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMX9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.680e-27
Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 0
Query:   96 IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            ++ EVKPW+ E DL+ L  KI  V++DGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DIT+ +E F++ VQSVD+A+MNK+
Sbjct:  105 VVIEVKPWEAETDLEELAAKIKEVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 189          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.550e-27
Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 0
Query:   96 IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            ++ EVKPW+ E DL+ L  KI  V++DGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DIT+ +E F++ VQSVD+A+MNK+
Sbjct:  145 VVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: A0A485L9S1_9STRA (Aste57867_18212 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9S1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 6.330e-27
Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 0
Query:   96 IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            ++ EVKPW+ E DL+ L  +I  ++IDGL WGE HKLVPVAFG+KKL++ C++ DDKV ++DITD +E F++ VQSVD+A+MNK+
Sbjct:  103 VVIEVKPWEAETDLEELAAQIKALEIDGLSWGEGHKLVPVAFGIKKLLVQCIIVDDKVLLDDITDAIEAFEDYVQSVDIASMNKV 187          
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Match: F0WHY5_9STRA (EF1 guanine nucleotide exchange domaincontaining protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WHY5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 9.780e-27
Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 0
Query:   96 IIFEVKPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVMEGFDEEVQSVDMATMNKI 180
            ++ EVKPWD E DL+AL  KI + K +GL WGE HKLV VA+G+KKL++ CV+ DD V +EDITD++E F++ VQSVD+A+MNKI
Sbjct:  134 VVVEVKPWDKETDLEALAIKIKSTKKEGLTWGEGHKLVDVAYGIKKLLVQCVILDDMVSLEDITDIIEQFEDSVQSVDIASMNKI 218          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.76.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFV9_9PHAE4.000e-5660.64EF1_GNE domain-containing protein n=3 Tax=Ectocarp... [more]
A0A6H5KBH2_9PHAE7.400e-5079.46EF1_GNE domain-containing protein n=2 Tax=Ectocarp... [more]
D8LM77_ECTSI3.330e-3973.15Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835ZFP2_9STRA3.390e-2945.11EF-1 guanine nucleotide exchange domain-containing... [more]
F0WC99_9STRA1.080e-2753.57EF1 guanine nucleotide exchange domaincontaining p... [more]
A0A8J5I4Y8_9STRA1.210e-2752.94EF1_GNE domain-containing protein n=1 Tax=Phytopht... [more]
A0A6G0WMX9_9STRA1.680e-2757.65EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
A0A6G0WJF4_9STRA4.550e-2757.65EF1_GNE domain-containing protein n=1 Tax=Aphanomy... [more]
A0A485L9S1_9STRA6.330e-2757.65Aste57867_18212 protein n=1 Tax=Aphanomyces stella... [more]
F0WHY5_9STRA9.780e-2760.00EF1 guanine nucleotide exchange domaincontaining p... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availablePANTHERPTHR11595:SF21ELONGATION FACTOR 1-BETAcoord: 40..180
NoneNo IPR availablePANTHERPTHR11595ELONGATION FACTOR 1-BETAcoord: 40..180
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainSMARTSM00888EF1_GNE_2coord: 93..180
e-value: 6.4E-26
score: 102.1
IPR014038Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainPFAMPF00736EF1_GNEcoord: 96..180
e-value: 3.2E-29
score: 101.0
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 92..180
e-value: 2.0E-31
score: 109.9
IPR036219Translation elongation factor eEF-1beta-like superfamilySUPERFAMILY54984eEF-1beta-likecoord: 92..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:626973..632348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.76.1mRNA_F-serratus_M_contig10.76.1Fucus serratus malemRNAF-serratus_M_contig10 626973..632348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig10.76.1 ID=prot_F-serratus_M_contig10.76.1|Name=mRNA_F-serratus_M_contig10.76.1|organism=Fucus serratus male|type=polypeptide|length=181bp
MAAMCDISFDEMAVALSYISLGRSKAGKKPAAKDRELPAVSDPAPPATAP
EEKKDDDDMDDLFDDEECGEPPAPKEESRAEKMALIKAAKDAKKKIIFEV
KPWDTEVDLKALFDKITNVKIDGLVWGEAHKLVPVAFGVKKLVLSCVVED
DKVGVEDITDVMEGFDEEVQSVDMATMNKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014038EF1B_bsu/dsu_GNE
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR036219eEF-1beta-like_sf