prot_F-serratus_M_contig10.60.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig10.60.1
Unique Nameprot_F-serratus_M_contig10.60.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length475
Homology
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Match: A0A7S2YIS7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YIS7_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.000e-58
Identity = 146/418 (34.93%), Postives = 212/418 (50.72%), Query Frame = 0
Query:   26 KHLWDITVSFIQSVERLSRCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSNGNVFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPNFVGGSRTGRKGERRREAVVGGVSYKAVGSALLVSEMAVNFLQFAADFPAIVTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSLGLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSMIEELIDAR-SSTLRLTNWDT-----PGGSDAGGSVGGGAAVGNDPC-QFTADVRKAVTAMHNILQQQLPPEQLQAVFRRMFTAITRKVPACF---------------QREG---VSPSTEAGRQRILDDIGFACAALSTLRGI 418
            K LWD  VSF   +E L+      +RSTLL+QAKAF+E +H++N   LV  LD+E+W+Q  V+ +RQ  L RL  G    + +A +                                                  E+++E  V GV YK V S LL+ EM +  L  A+ F    + +V ++++LLR+FNSR+TQLVLGA AIHSAA LKSI+AKHL+L +Q LGLV S++P ++A+L   LP K H LL  MD + ++Y +H +K+LNKFV++I  +I+   +  L  T++D      P G D           GN PC  F   +      MH++L   LPP  LQ VF R+F  +  K+P  F               Q++    V P T+ G++R+L +       L+ L G+
Sbjct:    2 KRLWDKCVSFATQLEELTGYKASVVRSTLLAQAKAFIERKHDSNMSALVAALDSERWSQCDVSIQRQGALTRLCTGRKLITRSADE-------------------------------------------DDAXXXXEKQQEVEVNGVRYKVVWSCLLLIEMVIGNLSAASHFAGTTSSIVGKVADLLRLFNSRTTQLVLGAKAIHSAARLKSINAKHLSLVTQCLGLVISVLPNIRASLMAHLPSKQHRLLNVMDEIKKEYAEHNEKVLNKFVTIIGGIIEHHLAPKLPGTDFDARARDHPPGED-----------GNVPCCVFLEGISSNTRKMHHVLFSLLPPVHLQDVFSRIFAFVDTKIPTLFSSLSTEVTPQPGTTPQKQPPRFVYPQTDEGKKRMLLESESMTKKLNGLEGV 365          
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Match: A0A448Z1D8_9STRA (Vps54 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1D8_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.500e-58
Identity = 152/427 (35.60%), Postives = 227/427 (53.16%), Query Frame = 0
Query:    4 SVSQLLSVRREHNCTKLDVKEFKHLWDITVSFIQSVERLS-RCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSNGNVFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPNFVGGSRTGRKGERRRE-AVVGGVSYKAVGSALLVSEMAVNFLQFAADFP-AIVTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSLGLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSMIEELID-ARSSTLRLTNWDTPGGSDAGGSVGGGAAVGNDPCQ---FTADVRKAVTAMHNILQQQLPPEQLQAVFRRMFTAITRKVPACFQREGVS-----PSTEAGRQRILDDIGFACAALSTLRGI 418
            S+++LL +R+E +   + + E K LWD    F   +E  S +     LRSTL+ QAK+F++  HE+N  TLV  LD+E+W+Q  V+ ERQA L RL  G    S          P R                   L   GD              +KG+ +   AVV GV+YK V S LL+ EM +  L  AA F   + T+ VT++ EL+R+FN+R+T LVLGAGAIHSAA LKSI+AKHL+  +Q LG+  SL+P+++AAL  +LP K H LL  +D++  +Y+DH +K+LNKFVS+I  +++   +  +   ++D      A        A   D  +   F   +  +   +H +L   LPP+ LQ VF R+F  +   +P  F     +     PS++AG+ R+L ++G     L+ L G+
Sbjct:  660 SIAELLRLRKEAHSV-ISLSEMKQLWDTCTEFATKMEDYSNQTRAVSLRSTLVGQAKSFLDRTHESNMSTLVSALDSERWSQCEVSNERQAALTRLCTGLATVST---------PLR------------------NLQQNGD------------DDQKGKAKNPVAVVEGVNYKVVWSCLLLIEMIMTNLSSAAYFQRTLATNAVTKVVELMRLFNARATNLVLGAGAIHSAARLKSINAKHLSYVTQCLGMTISLLPHIRAALMAQLPAKQHGLLIDLDSIKSEYKDHNEKVLNKFVSIIGGIVEHGLAPRIASVDFDDRAKKQA-------TANEEDVVECFVFLDGISSSTRKLHTVLNALLPPDHLQDVFSRIFAHLDEHIPKLFVAAVTTGAFTFPSSDAGKNRLLTEVGQTTKTLNGLSGV 1039          
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Match: A0A8J2SKA8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKA8_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.290e-57
Identity = 147/429 (34.27%), Postives = 229/429 (53.38%), Query Frame = 0
Query:    5 VSQLLSVRREHNCTKLDVKEFKHLWDITVSFIQSVERLSRCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSNGNVFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPNFVGGSRTGRKGERRREAVVGGVSYKAVGSALLVSEMAVNFLQFAADFPAIVTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSLGLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSMIEELIDARSSTLRLTNWDTPGGSDAGGSVGGGAAVGNDP-CQFTADVRKAVTAMHNILQQQLPPEQLQAVFRRMFTAITRKVPACFQREGVSPSTEAGRQRILDDIGFACAALSTLRGIDSSTLRLEQAIGDL 432
            V +L+ +R+E N  +L   E + +W  +++F  S+ER +    + LRS L++QA+AF+E RH   K  LV  LDAE+W QA VTPERQ+ LDRLS G                                       +  D     + V  +   R     R A V G +YK V S L++ +  ++ L  AA FP I ++    + +L R F SR+ QLVL AGA+HS+A L++I+AKHL L SQSL L+ +L+P+++AAL+  L      LL ++D V++DY DH  KIL KF ++I E++DA  ++L   ++               A  G  P   F +DV K +TA+H +L +QLPP QL+ V   +F+ ++ ++P  F R  +  S+EA ++R+++D+ F   A   L    +  LRL+  + ++
Sbjct:  464 VGRLVQLRKEQNA-RLKQSELRRVWASSLAFASSIERATGEPAFALRSALVAQARAFLEKRHSDAKAALVACLDAERWAQADVTPERQSRLDRLSQG---------------------------------------LTNDEDDTVSDV--TPPARDKRSLRAANVEGRTYKCVWSGLVLLDRILDALGAAAAFPVIASEATACVVDLARFFESRTRQLVLFAGALHSSARLRTITAKHLGLASQSLNLIEALLPHVRAALSDALQNNDSELLKEVDAVSRDYADHHRKILAKFSTIIGEVVDAAGASLSQFSY--------------AACSGEAPFAPFVSDVAKNLTALHGVLAKQLPPSQLEEVCGDIFSLLSVRLPLLF-RPAIPSSSEA-KERLVEDLNFLRRAAKELDSAAAEKLRLDAFVAEV 834          
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Match: B7GE52_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE52_PHATC)

HSP 1 Score: 212 bits (539), Expect = 3.210e-56
Identity = 145/410 (35.37%), Postives = 219/410 (53.41%), Query Frame = 0
Query:   20 LDVKEFKHLWDITVSFIQSVERLSRCNGYK---LRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSNGNVFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPNFVGGSRTGRKGERRREAVVGGVSYKAVGSALLVSEMAVNFLQFAADFPAIVTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSLGLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSMIEELIDARSSTLRLTNWDTPGGSDAGGSVGGGAAVGNDPC-QFTADVRKAVTAMHNILQQQLPPEQLQAVFRRMFTAITRKVPACF-------QREGVSPSTEAGRQRILDDIGFACAALSTLRGI 418
            + ++E K +WD+   F+   E ++  +G+K   LRSTL++QAKAF+E +HE N  +LV  LDAE+WTQ  V+PERQ VL RL  G                   R++                 +R       N V        GE   EA V G  YK V S LL+ EM    +  ++ F  + +++V + +ELLR+FNSR+T LVLGAGAIHSAA LKSI+AKHL+L +Q LG++ +L+P+++AA   ++P K H+LL  +D +  +Y DH +K+LNKFV++I  +++ R    ++   D     D   +V      G  PC  F   +      MH +L   LP + LQ VF R+F  + +K+P  +        +  V P TE G++R+L ++      L+ L G+
Sbjct:  601 VSLEEMKRIWDVCFGFVSQTESMT--SGHKAATLRSTLMAQAKAFIERKHERNMSSLVAALDAEQWTQCQVSPERQGVLTRLCAG-------------------RSVL----------------LRTRSTDILNTV-------LGENEPEAQVEGSGYKVVWSCLLLVEMFTQNIAASSHFTFLASNLVAKTTELLRLFNSRTTTLVLGAGAIHSAARLKSINAKHLSLVTQCLGMILALLPHVRAAFMAQMPTKQHVLLNSLDQIKSEYSDHNEKVLNKFVTIIGSIVE-RILAPKIGGTDF----DKRATVFPIPEDGIVPCCAFLDGIFINTRKMHQVLSASLPSDHLQDVFSRIFAFLDQKIPVFWIAASESQSQSFVLPLTEDGKRRMLFEVQTTMQNLNALNGV 961          
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Match: A0A7S2RDT9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDT9_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.320e-54
Identity = 128/306 (41.83%), Postives = 182/306 (59.48%), Query Frame = 0
Query:    3 RSVSQLLSVRRE-HNCTKLDVKEFKHLWDITVSFIQSVERLSRCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSNGN-VFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPNFVGGSRTGRKGERRREAVVGGVSYKAVGSALLVSEMAVNFLQFAADFPAIVTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSLGLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSMIEELID 306
            +SV++LL +R+E H+    D  E K LWD  ++F   +E+ S    Y LRSTLL+QAKAFVE +HE+N  +LV  LD EKW+Q+ V+ ERQA L RL +G  V  + N   A   D +                          +  + N V             +A V G  ++ V S LL+ EM +  +  AA F  + T+VV ++SELLR+FN+RSTQLVL AGAIHSAA LKSI+AKHLAL +Q +GLV +++P+++AAL  +LP K H LL  +D + ++Y DH DK+ +KFVS+I  +++
Sbjct:  417 KSVTELLRLRKEAHSLVSFD--EMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRAVLSTTNRRNAQPSDSN-------------------------PMINRDNMV-------------DAEVEGKHFRVVWSCLLLVEMVMGNVACAAHFQTLATNVVGKVSELLRLFNARSTQLVLSAGAIHSAARLKSINAKHLALVTQCIGLVLAILPHVRAALMAQLPNKQHTLLLDLDRIKKEYVDHNDKVFSKFVSIIGGIVE 682          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2YIS7_9STRA1.000e-5834.93Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A448Z1D8_9STRA2.500e-5835.60Vps54 domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A8J2SKA8_9STRA1.290e-5734.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7GE52_PHATC3.210e-5635.37Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2RDT9_9STRA1.320e-5441.83Vacuolar protein sorting-associated protein 54 (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012501Vacuolar protein sorting-associated protein 54, C-terminalPFAMPF07928Vps54coord: 173..303
e-value: 2.1E-40
score: 138.3
NoneNo IPR availablePANTHERPTHR12965:SF0VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54coord: 2..420
IPR039745Vacuolar protein sorting-associated protein 54PANTHERPTHR12965VACUOLAR PROTEIN SORTING 54coord: 2..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:281976..290602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.60.1mRNA_F-serratus_M_contig10.60.1Fucus serratus malemRNAF-serratus_M_contig10 280798..290980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig10.60.1 ID=prot_F-serratus_M_contig10.60.1|Name=mRNA_F-serratus_M_contig10.60.1|organism=Fucus serratus male|type=polypeptide|length=475bp
MERSVSQLLSVRREHNCTKLDVKEFKHLWDITVSFIQSVERLSRCNGYKL
RSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQAAVTPERQAVLDRLSN
GNVFPSANASKAPRGDPSRGRAIQGSNGSSSYGYGNGTLGVRGDLPAQPN
FVGGSRTGRKGERRREAVVGGVSYKAVGSALLVSEMAVNFLQFAADFPAI
VTDVVTRISELLRVFNSRSTQLVLGAGAIHSAANLKSISAKHLALCSQSL
GLVRSLIPYLKAALATRLPQKHHLLLTQMDTVAQDYRDHRDKILNKFVSM
IEELIDARSSTLRLTNWDTPGGSDAGGSVGGGAAVGNDPCQFTADVRKAV
TAMHNILQQQLPPEQLQAVFRRMFTAITRKVPACFQREGVSPSTEAGRQR
ILDDIGFACAALSTLRGIDSSTLRLEQAIGDLYGKGLGGTSNGMSGGSSG
SVNRGIPAAGRDAARGAVASDGRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012501Vps54_C
IPR039745Vps54