prot_F-serratus_M_contig10.101.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig10.101.1
Unique Nameprot_F-serratus_M_contig10.101.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length468
Homology
BLAST of mRNA_F-serratus_M_contig10.101.1 vs. uniprot
Match: G4YNC8_PHYSP (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNC8_PHYSP)

HSP 1 Score: 66.6 bits (161), Expect = 4.190e-8
Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = 0
Query:  264 DIWQSKVSGEKFIGVRVFYMDDKGILRTHLLAVKLFRP--NPSLGKITGAVVLKWLLTVLAQHGVAQKDIAGAVTDAGADVS--TGVGRAFDREWCNPHLLNRALLEGTGITSSAGSSPNAACYKLLEEAKKVI 393
            D W  K  GEK++G+R++++D    LRT LL  + F P        I G    +W+  +L   G++  D  G+ TD+  DV      G     EWC PH++N A   G G+T     S N    +LL +  + I
Sbjct:  168 DFWTPKHGGEKYLGLRIYFVDSHFRLRTVLLGTRHFLPMYGERDQGIRGPFE-RWICGILFDFGLSPSDFFGSTTDSSPDVKWMMNEGLGLKWEWCIPHMVNAATKMGCGLTRK---SHNPEMSELLSKLSQTI 297          
BLAST of mRNA_F-serratus_M_contig10.101.1 vs. uniprot
Match: A0A225W0Q7_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W0Q7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 3.140e-6
Identity = 51/184 (27.72%), Postives = 80/184 (43.48%), Query Frame = 0
Query:  264 DIWQSKVSGEKFIGVRVFYMDDKGILRTHLLAVKLF--RPNPSLGKITGAVVLKWLLTVLAQHGVAQKDIAGAVTDAGADVSTGV--GRAFDREWCNPHLLNRALLEGTGITSSAGSSPNAACYKLLEEAKKVIQYFNRSTTSKILLEDLVESMGNGKGSKA--KLSQAVCQRWTSICKMLLRL 441
            D W S   G KF+G+R++++D+    ++ LL  + F  R +   G +  A  L+W+  +L    +   D+ GA TD GADV   +  G   + EWC PHL N A       T     S N     L     K I           L   L E +G   G++A  +L      R+  + +++ R+
Sbjct:  490 DFWSSLTKGAKFVGLRLYFIDNPWNFQSILLGTRHFYHRYSVRAGGVR-APFLRWVTELLGDFELRCSDLFGATTDGGADVKLVMQSGMMLNWEWCIPHLTNPA-------TKQFNKSKNPPMTDLFGRIVKPIYQTKHVEVMGSLFRKLCE-LGTDDGARAPQQLLDYKAHRFLGLTRVVRRI 664          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
G4YNC8_PHYSP4.190e-832.09Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
A0A225W0Q7_9STRA3.140e-627.72Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 256..444

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:1449640..1454632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.101.1mRNA_F-serratus_M_contig10.101.1Fucus serratus malemRNAF-serratus_M_contig10 1449631..1463187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig10.101.1 ID=prot_F-serratus_M_contig10.101.1|Name=mRNA_F-serratus_M_contig10.101.1|organism=Fucus serratus male|type=polypeptide|length=468bp
MSGEGSSSAAASGQQSMSSFLPGAPEHLLPPPPPPQLNTTTNIEAAKLTF
PAEIPTAVKKAVLSFQPPPGRALHPIKPKKSQSVAVYYGVKLDVVKEAGG
VEKQHYWMCLASHNCRQRGGNPIKLQGNTTTGATQHLQNVHQIKSVASTT
AVDRKKVVEEKIDDAFKNQAYKDNPSRFNLIQFVRSFIISAACPFSIGEN
QHIRHCLSLIRGEEKDRCQPERLNHKGIKRMVVELYDDTSRRYNAELTAA
IRKAPIPIVFINCDIWQSKVSGEKFIGVRVFYMDDKGILRTHLLAVKLFR
PNPSLGKITGAVVLKWLLTVLAQHGVAQKDIAGAVTDAGADVSTGVGRAF
DREWCNPHLLNRALLEGTGITSSAGSSPNAACYKLLEEAKKVIQYFNRST
TSKILLEDLVESMGNGKGSKAKLSQAVCQRWTSICKMLLRLLQSGPPSWR
STFAKGCPSPPRQEERV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf