mRNA_F-serratus_M_contig996.21243.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Match: A0A6H5KLA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA1_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.080e-63 Identity = 109/154 (70.78%), Postives = 129/154 (83.77%), Query Frame = 1 Query: 1222 SKEKLKEGYEGKPKGEKQYLWERELWKEGMSAAKGIADEMNIEKILQALPDFEAERTALQHVVGKRGHILLLSPKCHPEVSGVGIEYSWGFSKKNFRRKYNDEVSKHLHANIEKSLCPED-LTVGRVRHFARRTRDYCRAYRDIELGGGVIRSK 1680 +K K+K+GYEGK KG +QYLWER WK+GMS G++D+M+++K+LQALPDF+ ER ALQH+V RGHILL SPK HPEV+GVGIEYSWGFSK+ FR+K NDEV KHLH NIEKSLC + LT+GRVR FARRTRDYCRAYR+I L G VIRSK Sbjct: 191 AKGKVKKGYEGKAKGVRQYLWERGWWKDGMSTGAGVSDDMHVDKVLQALPDFKTERKALQHLVESRGHILLSSPKSHPEVAGVGIEYSWGFSKQKFRQKNNDEVPKHLHDNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRSK 344
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Match: A0A6H5L885_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L885_9PHAE) HSP 1 Score: 228 bits (582), Expect = 3.400e-62 Identity = 110/147 (74.83%), Postives = 126/147 (85.71%), Query Frame = 1 Query: 1324 GIADEMNIEKILQALPDFEAERTALQHVVGKRGHILLLSPKCHPEVSGVGIEYSWGFSKKNFRRKYNDEVSKHLHANIEKSLCPED-LTVGRVRHFARRTRDYCRAYRDIELGGGVIRSKDMIEKMRQKQKVHRNILDMEIGFLGKQ 1761 G++D+M++EK+LQALPDF+ ERTALQH+V RGHILL SPKCHPEV+GVGIEYSWGFSK+ FRRK NDEV KHLH NIEKSLC + LT+GRVR FARRTRDYCRAYR+I L G VIR+K+ IEKMR+ QK HRNILDME FLG Q Sbjct: 612 GVSDDMHVEKVLQALPDFKNERTALQHLVESRGHILLSSPKCHPEVAGVGIEYSWGFSKQKFRRKINDEVPKHLHGNIEKSLCIDKYLTIGRVRRFARRTRDYCRAYREIALRGVVIRNKEFIEKMRKIQKAHRNILDMETSFLGDQ 758
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Match: A0A6H5KJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ93_9PHAE) HSP 1 Score: 211 bits (537), Expect = 1.790e-61 Identity = 121/215 (56.28%), Postives = 143/215 (66.51%), Query Frame = 1 Query: 673 GKKLLSRSPGLAFLEYGKNKDGYWGYDQFAEQLEDVMDVIEVLDPGMQYVIEIDHSSGHTKQREDGLNVANMNVKYGGKQKVLRDTVVMEEYLGPEEAKMYFPDGEWSTVFSEGAVVVDLKLKAGDTQTSTFPAGAPPPFYAWDAPRKDSKVASRTRTXXXXXXXXXXXXXXXXXXXGAGRAASKEKLKEGYEGKPKGEKQYLWERELWKEGMSA 1317 GK++L RSPGL FL++GKNKDG WGYD+F +Q+ED DV +V +P MQ V+EIDHSSGHT+QREDGL+V NMNV +WST F+EGA V D+KLK GDTQTSTF A +PPPFY WDAPRKD KVA + + XXXXXXXXXX G ++K+KEGYEGK KG KQYLWER WKEGM+A Sbjct: 3 GKEVLKRSPGLRFLQHGKNKDGCWGYDEFKQQIEDAFDVFDVFEPDMQVVVEIDHSSGHTRQREDGLHVGNMNVN------------------------------KWSTEFTEGAEVYDMKLKVGDTQTSTFAASSPPPFYEWDAPRKDVKVARKAKRXXXXXXXXXXGDEGAADGAGI---KPRDKIKEGYEGKAKGSKQYLWERGWWKEGMNA 184
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Match: A0A6H5K836_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K836_9PHAE) HSP 1 Score: 201 bits (511), Expect = 2.150e-58 Identity = 97/128 (75.78%), Postives = 107/128 (83.59%), Query Frame = 1 Query: 1381 AERTALQHVVGKRGHILLLSPKCHPEVSGVGIEYSWGFSKKNFRRKYNDEVSKHLHANIEKSLCPED-LTVGRVRHFARRTRDYCRAYRDIELGGGVIRSKDMIEKMRQKQKVHRNILDMEIGFLGKQ 1761 +ERT LQH+V +RGHILLL+PKCHPEV+GVG +YSWG SK+ FRRK NDEV KHLHANIEKSLC + LTVGRVR FARRTRD+CRAYRDI L GG I SKD IEKMR+ QK HRNILDME FLG Q Sbjct: 21 SERTVLQHLVERRGHILLLAPKCHPEVAGVGTKYSWGLSKQKFRRKINDEVPKHLHANIEKSLCTDKYLTVGRVRRFARRTRDHCRAYRDIALSGGFIMSKDFIEKMRKNQKAHRNILDMETSFLGDQ 148
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Match: A0A7S3AY06_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AY06_9EUKA) HSP 1 Score: 206 bits (523), Expect = 4.570e-58 Identity = 107/227 (47.14%), Postives = 140/227 (61.67%), Query Frame = 1 Query: 421 CEAYHAPDVCKCNKKVRHIGQDESLYKAYAREGKEWVIQGVRGLRKKTEGPGEMVSAFQDERHGFGLPLPDGVLEEVNEIRKEKGKKLLSRSPGLAFLEYGKNKDGYWGYDQFAEQLEDVMDVIEVLDPGMQYVIEIDHSSGHTKQREDGLNVANMNVKYGGKQKVLRDTVVMEEYLGPEEAKMYFPDGEWSTVFSEGAVVVDLKLKAGDTQTSTFPAGAPPPFYAW 1101 CE H +VCKC+ + H+GQDES++KA+ +W+I+GVRG+RKKTEGPGEMVSA QDE GFG P+ L+ N +R ++ + L SPG+ FL YGK +DGYW Y+ F +Q+ D +D E L P Q ++E+D SSGH K RE LNV +MNVKYGGKQK R++ + L P EA YF G + KLK GDTQ F A + +Y W Sbjct: 2 CEYGHRKEVCKCHCPLYHVGQDESIFKAFLYSTTQWIIKGVRGVRKKTEGPGEMVSAMQDEIRGFGFPMTTAELDATNVLRGKRSRPALDCSPGVRFLNYGKGRDGYWDYEMFKQQVVDFIDAFETLHPDWQLLLEVDWSSGHAKHREGALNVNSMNVKYGGKQKTPRESRIP---LDPIEAAAYF--GPYPA-----------KLKPGDTQHFYFQAWSRQ-YYIW 211 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig996.21243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig996.21243.1 >prot_F-serratus_M_contig996.21243.1 ID=prot_F-serratus_M_contig996.21243.1|Name=mRNA_F-serratus_M_contig996.21243.1|organism=Fucus serratus male|type=polypeptide|length=585bp MSTTHAWLAKLGCKFERATKSFYTDTHEDPPVKKYRAVYVNTKRKIALRQback to top mRNA from alignment at F-serratus_M_contig996:28317..30080- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig996.21243.1 ID=mRNA_F-serratus_M_contig996.21243.1|Name=mRNA_F-serratus_M_contig996.21243.1|organism=Fucus serratus male|type=mRNA|length=1764bp|location=Sequence derived from alignment at F-serratus_M_contig996:28317..30080- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig996:28317..30080- >mRNA_F-serratus_M_contig996.21243.1 ID=mRNA_F-serratus_M_contig996.21243.1|Name=mRNA_F-serratus_M_contig996.21243.1|organism=Fucus serratus male|type=CDS|length=3510bp|location=Sequence derived from alignment at F-serratus_M_contig996:28317..30080- (Fucus serratus male)back to top |