mRNA_F-serratus_M_contig995.21241.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Match: A0A672K8D0_SINGR (Histone H3 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A672K8D0_SINGR) HSP 1 Score: 241 bits (616), Expect = 2.520e-80 Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ Sbjct: 3 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Match: A0A8C1ET08_CYPCA (Histone H3 n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A8C1ET08_CYPCA) HSP 1 Score: 241 bits (616), Expect = 2.520e-80 Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ Sbjct: 3 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Match: A0A3P6TB85_LITSI (Histone domain-containing protein n=2 Tax=Bilateria TaxID=33213 RepID=A0A3P6TB85_LITSI) HSP 1 Score: 242 bits (618), Expect = 2.530e-80 Identity = 131/136 (96.32%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ Sbjct: 24 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 159
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Match: A0A8B9F8D8_9PSIT (Histone H3 n=2 Tax=Amniota TaxID=32524 RepID=A0A8B9F8D8_9PSIT) HSP 1 Score: 241 bits (616), Expect = 2.610e-80 Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ Sbjct: 4 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Match: A0A8C7F568_ONCKI (Histone H3 n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7F568_ONCKI) HSP 1 Score: 241 bits (616), Expect = 2.610e-80 Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 1 Query: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLICKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 408 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI KLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+ Sbjct: 4 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig995.21241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig995.21241.1 >prot_F-serratus_M_contig995.21241.1 ID=prot_F-serratus_M_contig995.21241.1|Name=mRNA_F-serratus_M_contig995.21241.1|organism=Fucus serratus male|type=polypeptide|length=137bp MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALRback to top mRNA from alignment at F-serratus_M_contig995:117266..117676+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig995.21241.1 ID=mRNA_F-serratus_M_contig995.21241.1|Name=mRNA_F-serratus_M_contig995.21241.1|organism=Fucus serratus male|type=mRNA|length=411bp|location=Sequence derived from alignment at F-serratus_M_contig995:117266..117676+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig995:117266..117676+ >mRNA_F-serratus_M_contig995.21241.1 ID=mRNA_F-serratus_M_contig995.21241.1|Name=mRNA_F-serratus_M_contig995.21241.1|organism=Fucus serratus male|type=CDS|length=822bp|location=Sequence derived from alignment at F-serratus_M_contig995:117266..117676+ (Fucus serratus male)back to top |