mRNA_F-serratus_M_contig994.21234.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Match: A0A0W8DB60_PHYNI (cGMP-dependent protein kinase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DB60_PHYNI) HSP 1 Score: 244 bits (622), Expect = 3.380e-67 Identity = 172/490 (35.10%), Postives = 244/490 (49.80%), Query Frame = 1
Query: 541 IQDMYDLVDNPVGAGAFGVVCAGVHKITGELVAVKQIPRRGMQPTKLQSEVDLLRLAGEHSNVVNFRDLFSDDDYFYIVMEFATGGELFDRLVQKGAHSEHDAACLIREVTDALAYLHGNDVVHFDIKPENILLQSSDTDSLDVKLVDFGSSFVVGPTSVGIPRENSGTIAYSAPEVLR--------------------GQP-------------------FGTAADMWSTGVVLYILLSGAHPFDLDGGAEDAEVRERVLAGDVSFENPVWEG-KDGAISLIKGLLEVDPKLRLTANEVLEHPWIGERAKLSRRPMTGAAENLRVFHRGRMRLKALLLAVMT-------------------------GLAGP-DAYMDPTATVGSRRQALRFMDVGLKGYISAEDLRRTLRLLDEDLRDEELTQMMQASTGRPGEQDAPL--ILYNNFMKLVPPLCPSHVFEAGDTIYS---AGAMDRYFFLINQGEVA 1797
I D Y+++D VG G + VV G+ + TGELVAVK + + + SEVD+LR+AG H N++ R + D ++IV E A GELFD LV GA+SE A+ IR++ DAL YLH +VH DIKPEN+LL + LVDFG SF +G GT+AY+APE L G+ FG +DM++ G+VLYILL G+HPFD D E+R+R+L G ++ W A LIK LLE+D RL+A + L+HPW+ +++LS PM +AE L F RGR RL+A +LAV+ GL+ +A + T + S L F D KG+IS +DL R L + + D EL +M+ +TG P + + + + Y+N ++ L S + G+ I AGA + Y L + EV+
Sbjct: 40 IHDDYEILDEIVGEGGYCVVQKGIDRRTGELVAVKMLSKSETSAREFWSEVDVLRVAGLHPNILQLRGTYETDCCWFIVQELAQDGELFDHLVANGAYSERQASDTIRQLCDALQYLHRKGIVHGDIKPENVLLHKG-----RMCLVDFGVSFRMGERFF-YDSHLMGTVAYAAPETLEHGALIHRRNTRDALRRARANGEDVQLDEDEDLDAQAGPDAIKFGPKSDMFALGIVLYILLCGSHPFDTYNNLSDEEIRKRILKGKFRTQSRAWHSISSSARDLIKKLLEIDSNKRLSAEQALQHPWLRNQSQLSHEPMKNSAELLEKFQRGRRRLRASILAVLLLDAMAENLDEDDNKELESVKRSFAWGLSSSVEALNEKTNALLS---TLHFFDKEGKGFISKKDLARVSESLGKHMSDNELNEMLVGATGDPEQNISSVDAVDYDNVKMMISTL-RSATYRPGEAIIREGHAGAHNVYLLLDGEVEVS 519
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Match: H3GS53_PHYRM (cGMP-dependent protein kinase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS53_PHYRM) HSP 1 Score: 247 bits (630), Expect = 1.260e-66 Identity = 173/490 (35.31%), Postives = 242/490 (49.39%), Query Frame = 1
Query: 535 RRIQDMYDLVDNPVGAGAFGVVCAGVHKITGELVAVKQIPRRGMQPTKLQSEVDLLRLAGEHSNVVNFRDLFSDDDYFYIVMEFATGGELFDRLVQKGAHSEHDAACLIREVTDALAYLHGNDVVHFDIKPENILLQSSDTDSLDVKLVDFGSSFVVGPTSVGIPRENSGTIAYSAPEVLR--------------------GQP--------------------FGTAADMWSTGVVLYILLSGAHPFDLDGGAEDAEVRERVLAGDVSFENPVWEG-KDGAISLIKGLLEVDPKLRLTANEVLEHPWIGERAKLSRRPMTGAAENLRVFHRGRMRLKALLLAVMTGLAGPDAYMD-------------------PTATVGSRRQAL----RFMDVGLKGYISAEDLRRTLRLLDEDLRDEELTQMMQASTGRPGEQDAPL--ILYNNFMKLVPPLCPSHVFEAGDTIYS---AGAMDRYFFLINQGEVA 1797
R I D YD++D VG G + VV GV K TGELVAVK + + + SEVD+LR+AG+H N++ R + + ++IV E A GELFD L+ GA+SE A+ IR++ DAL YLH +VH DIKPENILL + LVDFG SF +G + GT+AY+APE L G+ FG ADM++ G+VLYILL G+HPFD D E+R+R+L G ++ W+ A LI LLE DP RL+A + L+HPW+ +++LS PM + E L F RGR RL+A +LAV+ A D D + + AL F D KG+IS +DL R L + + + EL +M+ +TG P + + + Y+N +K+ S + G+ I AGA + Y L + EV+
Sbjct: 109 RNIHDDYDILDEVVGEGGYCVVQKGVDKRTGELVAVKMLSKSETSAREFWSEVDVLRVAGQHPNILQLRGTYETEYCWFIVQELAQDGELFDHLIANGAYSERQASNTIRQLCDALQYLHRKGIVHGDIKPENILLHKG-----RMCLVDFGVSFRMGERFF-YDSQLMGTVAYAAPETLEHGALIHRRNTRDALRKARANGEDVSLDENDEDLDSQAGPDAINFGPKADMFALGIVLYILLCGSHPFDTYNNLSDEEIRKRILKGKFRTQSRAWQSISPSARDLILKLLETDPNQRLSAEQALQHPWLRNQSQLSHEPMKNSVELLEKFQRGRRRLRASILAVLLLDAMDDNIDDGDNEELESVKRSFAWGLSSSVEALNEKTNALLSTLHFFDKEGKGFISKKDLARVSESLGKHMSENELNEMLVGATGDPEHNASTVEAVDYDN-VKMTISTLRSATYRPGEAIIREGHAGAHNVYLLLDGEVEVS 591
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Match: A0A1Z5JLI7_FISSO (cGMP-dependent protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLI7_FISSO) HSP 1 Score: 244 bits (623), Expect = 5.290e-66 Identity = 150/432 (34.72%), Postives = 233/432 (53.94%), Query Frame = 1
Query: 556 DLVDNPVGAGAFGVVCAGVHKITGELVAVKQIPRRGMQPTKLQSEVDLL---RLAGEHSNVVNFRDLFSDDDYFYIVMEFATGGELFDRLVQKGAHSEHDAACLIREVTDALAYLHGNDVVHFDIKPENILLQSSDTDSLDVKLVDFGSSFVVGPTSVGIPRENSGTIA-----YSAPEVLRGQP--FGTAADMWSTGVVLYILLSGAHPFDLDGGAEDAEVRERVLAGD---VSFENPVWEGKDGAISLIKGLLEVDPKLRLTANEVLEHPW-IGERAKLSRRPMTGAAENLRVFHRGRMRLKALLLAVMTGLAGPDAYMDPTATVGSRRQALRFMDVGLKGYISAEDLRRTLRLLDEDLRDEELTQMMQASTGRPGEQDAPLILYNNFMKLVPPLCPSHVFEAGDTIYSAGAMDRYFFLINQGEVALEIE 1809
D + P+G GAFG V GV K TGE VA+K+IP+ E+ L + AG H + + RD ++D ++Y++ + +GGE+FD LV +G++SE DAA L+REV ALA+LHG H D+KPEN++L + + +KLVDFG + V + E+ T+A Y PE+LR + A DMW+ GV+LYI+L+G HPFDL G + D E+ + +L+G + + + D AI +I+ L+E DP RLTA+E+LEHPW IG A S MTGA++ L +F R ++ A + A + + + D + V ++ R D +GY++ E + +E L D E + ++S G+ D + + F L+ + F +Y G++ + + IN G V +E E
Sbjct: 103 DWDEGPLGVGAFGTVYWGVDKKTGEPVALKKIPKELTDEEAFLREMTALMHIQKAGGHPYICSLRDCYADGQHYYLIFDLVSGGEMFDHLVDQGSYSERDAARLVREVASALAFLHGLGTTHGDLKPENLMLSTKNPSDACIKLVDFGCALVEDEDNGKAVEEDENTVAAFTVAYCPPEILRAEDPTMSPAMDMWALGVILYIMLTGIHPFDLRGDSSDEEIEKTILSGKKPPLKNSSIAYHLSDSAIDIIEKLIEPDPSKRLTADEMLEHPWVIGTTA--SSDAMTGASKKLSMFRAYRTKMSAKVFANIVSWSDDEGADDVSKRVSLIERSFRAFDSKQRGYLTRESV-------EELLPDTEKPR--KSSFSLFGKNDPAKLSLSGFSDLLAENMQNKYFPKNHIVYKEGSIGNHMYFINSGTVLIETE 523
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Match: A0A0W8DWR4_PHYNI (cGMP-dependent protein kinase n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWR4_PHYNI) HSP 1 Score: 244 bits (622), Expect = 5.600e-66 Identity = 172/490 (35.10%), Postives = 244/490 (49.80%), Query Frame = 1
Query: 541 IQDMYDLVDNPVGAGAFGVVCAGVHKITGELVAVKQIPRRGMQPTKLQSEVDLLRLAGEHSNVVNFRDLFSDDDYFYIVMEFATGGELFDRLVQKGAHSEHDAACLIREVTDALAYLHGNDVVHFDIKPENILLQSSDTDSLDVKLVDFGSSFVVGPTSVGIPRENSGTIAYSAPEVLR--------------------GQP-------------------FGTAADMWSTGVVLYILLSGAHPFDLDGGAEDAEVRERVLAGDVSFENPVWEG-KDGAISLIKGLLEVDPKLRLTANEVLEHPWIGERAKLSRRPMTGAAENLRVFHRGRMRLKALLLAVMT-------------------------GLAGP-DAYMDPTATVGSRRQALRFMDVGLKGYISAEDLRRTLRLLDEDLRDEELTQMMQASTGRPGEQDAPL--ILYNNFMKLVPPLCPSHVFEAGDTIYS---AGAMDRYFFLINQGEVA 1797
I D Y+++D VG G + VV G+ + TGELVAVK + + + SEVD+LR+AG H N++ R + D ++IV E A GELFD LV GA+SE A+ IR++ DAL YLH +VH DIKPEN+LL + LVDFG SF +G GT+AY+APE L G+ FG +DM++ G+VLYILL G+HPFD D E+R+R+L G ++ W A LIK LLE+D RL+A + L+HPW+ +++LS PM +AE L F RGR RL+A +LAV+ GL+ +A + T + S L F D KG+IS +DL R L + + D EL +M+ +TG P + + + + Y+N ++ L S + G+ I AGA + Y L + EV+
Sbjct: 40 IHDDYEILDEIVGEGGYCVVQKGIDRRTGELVAVKMLSKSETSAREFWSEVDVLRVAGLHPNILQLRGTYETDCCWFIVQELAQDGELFDHLVANGAYSERQASDTIRQLCDALQYLHRKGIVHGDIKPENVLLHKG-----RMCLVDFGVSFRMGERFF-YDSHLMGTVAYAAPETLEHGALIHRRNTRDALRRARANGEDVQLDEDEDLDAQAGPDAIKFGPKSDMFALGIVLYILLCGSHPFDTYNNLSDEEIRKRILKGKFRTQSRAWHSISSSARDLIKKLLEIDSNKRLSAEQALQHPWLRNQSQLSHEPMKNSAELLEKFQRGRRRLRASILAVLLLDAMAENLDEDDNKELESVKRSFAWGLSSSVEALNEKTNALLS---TLHFFDKEGKGFISKKDLARVSESLGKHMSDNELNEMLVGATGDPEQNISSVDAVDYDNVKMMISTL-RSATYRPGEAIIREGHAGAHNVYLLLDGEVEVS 519
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Match: A0A836CCA1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA1_9STRA) HSP 1 Score: 231 bits (590), Expect = 9.600e-66 Identity = 120/271 (44.28%), Postives = 179/271 (66.05%), Query Frame = 1
Query: 517 RSTSYRRRIQDMYDLVD--NPVGAGAFGVVCAGVHKITGELVAVKQIPRRGMQPTKLQSEVDLLRLAGEHSNVVNFRDLFSDDDYFYIVMEFATGGELFDRLVQKGAHSEHDAACLIREVTDALAYLHGNDVVHFDIKPENILLQSSDTDSLDVKLVDFGSSFVV------GPTSVGIPRENSG--TIAYSAPEVLRGQ-----PFGTAADMWSTGVVLYILLSGAHPFDLDGGAEDAEVRERVLAGDVSFENPVWEG-KDGAISLIKGLL 1281
+S + RR D Y L++ +P+G GA+G VCA H+ TGE+VAVKQIPR + ++ SEV++LR+AG+H ++V DLF DDD +Y+VME A GGELFDR+V KG SEHD +++++ A+ +LH +++VH DIKPENI++ + D+ ++DV+L DFG++F V G ++ G S T+AYS PEVL G AD+W+ GV++YIL++G HPFD+D GA++ E++ + G+ F +P+W AI LIK +L
Sbjct: 71 KSRCHYRRFDDFYKLLEKTSPIGMGAYGTVCAAAHRETGEVVAVKQIPRSAVSAKEVMSEVEILRVAGDHRHIVRLMDLFWDDDLWYVVMEMAHGGELFDRIVNKGLLSEHDTCKVMQDLLHAIEFLHMHNIVHGDIKPENIMI-AEDSSTIDVRLGDFGTAFEVMGQKGRGGSADGAKLSGSSRMTVAYSPPEVLDQDGDDDVEVGPKADVWALGVLMYILIAGRHPFDMDPGADEDELQRHICRGEPDFSDPLWSDVSPAAIDLIKRML 340 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig994.21234.1 >prot_F-serratus_M_contig994.21234.1 ID=prot_F-serratus_M_contig994.21234.1|Name=mRNA_F-serratus_M_contig994.21234.1|organism=Fucus serratus male|type=polypeptide|length=751bp MFKSLHRGALLVGRMSLLTPRNIIHGLRTTRKNGSETIVSVGSPGQLVEPback to top mRNA from alignment at F-serratus_M_contig994:260322..276101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig994.21234.1 ID=mRNA_F-serratus_M_contig994.21234.1|Name=mRNA_F-serratus_M_contig994.21234.1|organism=Fucus serratus male|type=mRNA|length=15780bp|location=Sequence derived from alignment at F-serratus_M_contig994:260322..276101+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig994:260322..276101+ >mRNA_F-serratus_M_contig994.21234.1 ID=mRNA_F-serratus_M_contig994.21234.1|Name=mRNA_F-serratus_M_contig994.21234.1|organism=Fucus serratus male|type=CDS|length=4506bp|location=Sequence derived from alignment at F-serratus_M_contig994:260322..276101+ (Fucus serratus male)back to top |