mRNA_F-serratus_M_contig994.21229.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig994.21229.1
Unique NamemRNA_F-serratus_M_contig994.21229.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A6H5K0Z4_9PHAE (Phosducin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 6.300e-71
Identity = 172/335 (51.34%), Postives = 194/335 (57.91%), Query Frame = 1 
Query:    1 GDLEDKILKKNIPGKFSWWEKDSDEEGRGRGRIGWTAKPAT-PRQSCRSCRSSKSGWRTIVPSPSDARSWRGRRRSGLGRESREC*QTMATGSARKMQRPSSPRNTEPQCSSA*RKATSSR--------DPLRPSG-GKPRGVDDXXXXXXXXXXGDEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADES-YDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEA 972
            GDLEDKILKKNIPGK++WWEKDSDEEG    R  W  + A+ P +        K       P P         RR+ + R+ +E  +T   G            + E   +   R A   R         PL  +          XXXXXXXXXX  E FLGSYRRRRLEQLKA+AGRP FGQI E +R++FVS VDTEDPRT VVVHLYEPYI AC RMNRFLEV                                      LA KQPTVKFLRLR+SAA+   YDP+ALPTLLLYRAGEV+GCMTRVTDDIGE+FT DDVEWLLQEHDVFEA
Sbjct:    2 GDLEDKILKKNIPGKYTWWEKDSDEEGE-TARADWVDREASDPEREMTEMEKQKKWVDNDCPEPI--------RRTIMARQEKERARTGVKGVLADFDAWKLSADAEDLIAKEYRAAMLKRMAEGHTVPGPLAATTIXXXXXXXXXXXXXXXXXXXXEGFLGSYRRRRLEQLKATAGRPQFGQIVEAERSTFVSAVDTEDPRTSVVVHLYEPYIDACRRMNRFLEV--------------------------------------LAAKQPTVKFLRLRSSAAEGGDYDPVALPTLLLYRAGEVVGCMTRVTDDIGENFTQDDVEWLLQEHDVFEA 289
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A835YKQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKQ5_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.070e-46
Identity = 126/337 (37.39%), Postives = 164/337 (48.66%), Query Frame = 1 
Query:    7 LEDKILKKNIPGKFSWWEKDSDEEGRGRGRIGWTAKPAT-PRQSCRSCRSSKSGWRTIVPSPSDARSWRGRRRSGLGRESREC*QTMATGSARKMQRPSSPRNTEPQCSSA*RKATSSRDPLRPSGGK----------PRGVDDXXXXXXXXXXGDEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAA----DESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEA 972
            LED+ILK+NIPGK+SWWEKD+DE G  + R  W    A+ P Q        K       P P         RR+ + R  +E  +T   G         +    + Q     R A   R     +GG           P+   D             +FL  YR++RL +L+ASA RP FGQI+E  R  FV +VD  DPR +VVVHLYEPYI AC  MNR LEV+ R                                      + P+VKFLR+ +       +E YDP+ALPTL++YRA E++ C TRVTDD+G++FT  DVEWLLQE ++FEA
Sbjct:    4 LEDQILKQNIPGKYSWWEKDTDEAGP-KARAEWFDPDASDPEQELTELEKQKKWVEADCPDPV--------RRTIMARAEKERARTGVKGVLADHAAYQASEMADHQLQQQYRAAALQR----MAGGHVVANSAPHFVPKTDPDAEDGDDDEDGDLNDFLSEYRKQRLLELQASAHRPIFGQIQEASRGDFVEQVDNVDPRCYVVVHLYEPYIKACQAMNRHLEVLAR--------------------------------------EYPSVKFLRMLSGDVSGGDEEGYDPVALPTLMVYRAKEIVACFTRVTDDLGDTFTKSDVEWLLQEINIFEA 289
[Close]
BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A7R9UGG9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 7.120e-36
Identity = 110/337 (32.64%), Postives = 157/337 (46.59%), Query Frame = 1 
Query:    7 LEDKILKKNIPGKFSWWEKDSDEEGRGRGRIGWTAKPATPRQSCRSCRSSKSGWRTIVPSPSDARSWRGRRRSGLGRESREC*QTMATGSARKMQRPSSPRNTEPQCSSA*RKAT---SSRDPLRPS-GGKPRGVDDXXXXXXXXXXGDEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTS----AADESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEAPQKPGAS 993
            LEDK+LKKNIPGK+SWW  D +++ RG    G    P    +     +      R +  +P   R      R+ + +  RE   T   G  R  +      + +    +  R A    ++R  +R + GG    V++           D+EFL  YRR+R+ QL A+A  P FG++ E     FV  VD  DPR FVVVHLYEP++  C +MNR LE++ R                                      +QP+VKFLR+R         + +D IALPTLL+YR G+ +  + RV D++GE    +DVEWLL    VF+A Q   A+
Sbjct:    3 LEDKMLKKNIPGKYSWW--DDEDDHRGXXXXGEVQDPDEEGKDDLDVQ------RALQDAPEPVR------RACMSQRVREKDNTGVKGVLRDFEEWRDEEDAKETSDAMRRNAALQRAARGAIRAADGGAHANVENADIDS------DDEFLERYRRQRMSQLMAAAAAPTFGEVAEVSGDDFVETVDAVDPRAFVVVHLYEPFVHLCTKMNRVLEILAR--------------------------------------RQPSVKFLRMRADECRRTTGQEFDAIALPTLLVYRGGQTVATIVRVQDEVGEGLQANDVEWLLGLEGVFQASQNDSAA 281
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A7S2B798_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B798_9STRA)

HSP 1 Score: 116 bits (291), Expect = 9.460e-25
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 1 
Query:  439 DEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEAPQ 978
            +E+FL  +R  R+ +L++++ +P FG I E     +   +D  DPR FVVVH+YE Y+  CGRMNR  E + RS                                         VKF+RL+++ +   +DP+ LPT+ +Y+AG++     RV D +G +F+ DD+EW+L +  VFE+ Q
Sbjct:  173 EEDFLSKFREARIRELQSASTQPVFGNIVEVAAHEYCEAIDKCDPRVFVVVHIYEDYVKECGRMNRCFEELARSYT--------------------------------------NVKFVRLKSTESPSPFDPVTLPTICVYKAGDLCNSFVRVQDTVGTNFSSDDIEWMLNQEGVFESKQ 314
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A7S2RCN5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCN5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.260e-22
Identity = 65/180 (36.11%), Postives = 90/180 (50.00%), Query Frame = 1 
Query:  439 DEEFLGSYRRRRLEQLKASAGRPHFGQIRE-TDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEAP 975
            +++ L   R +R  +L+A+A  P FG++RE T    F+  +D ED R FVVVH+Y+  + AC  MNR  E + RS                                         VKFLRL+ +AA  ++D   +P L +YR+G++  C  RVTD +GE FT DDVE LL EH VF  P
Sbjct:  174 EQDILRRLREQRRRELQAAASMPVFGEVREVTADDHFLEAIDKEDSRVFVVVHIYDEAVPACRSMNRCFERLARS--------------------------------------HSHVKFLRLQAAAAPTTFDADVMPVLSIYRSGDMHACCVRVTDQVGERFTTDDVENLLSEHGVFAVP 315
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: F4NRT6_BATDJ (Phosducin domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4NRT6_BATDJ)

HSP 1 Score: 97.4 bits (241), Expect = 1.560e-18
Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 1 
Query:  439 DEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDI 909
            D+E++  YR RRL +LK+ A RPHF  +    +  +V  +D EDP   VV+HLY+    AC ++N FL+                                       LAT  PT+KF ++ ++ ADES+D +ALP LL+YRAG +   + R+TD+I
Sbjct:  159 DDEYIKEYRARRLLELKSQAMRPHFSTVYNLQQEDYVDVIDNEDPLVTVVIHLYKSTHDACRQVNTFLDH--------------------------------------LATSYPTIKFAKIVSTVADESFDDVALPALLVYRAGALTHTLLRMTDEI 277
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A8C3ZX36_9TELE (Phosducin like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZX36_9TELE)

HSP 1 Score: 93.2 bits (230), Expect = 3.690e-17
Identity = 71/198 (35.86%), Postives = 97/198 (48.99%), Query Frame = 1 
Query:  445 EFLGSYRRRRLEQLK-ASAGRPHFGQIRET-DRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADES--YDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEAPQKPGASLTEHSGTNGAL 1026
            EFL  YR++R+ +++ A AG   F Q+ +  D   F+S VD ED  T V+VHLYEP + AC  M              EGS L                         LA + P VKF R + SA   S  +   ALP LLLYR GE++G + RV+D +G+ F   DVE LLQE+ +   P K  A    H+ ++G +
Sbjct:  135 EFLAQYRQQRIAEMRRALAGGRRFAQVYDICDGEEFLSAVDQEDRNTLVLVHLYEPEVPACQAM--------------EGSLL------------------------CLALQYPLVKFCRAQGSAVGASALFRRSALPALLLYRGGELVGNLVRVSDQLGDDFYATDVEALLQEYGLL--PDKD-AQAAAHAASSGGI 291
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A0L0T5G2_ALLM3 (Phosducin domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T5G2_ALLM3)

HSP 1 Score: 91.7 bits (226), Expect = 9.810e-17
Identity = 63/177 (35.59%), Postives = 86/177 (48.59%), Query Frame = 1 
Query:  439 DEEFLGSYRRRRLEQLKASAGRPHFGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDI----GESFTLDDVEWLLQEH 957
            D+E L  YR +R+ Q+++   RP FG  RE     F+ EVD E   T V++HLYE YI  C  +NR L                                        LA+K   VKFLRL  S AD+ +D +ALPT+ +YR G++   + RV+DD+    GE+F LDD E +L  H
Sbjct:  114 DDEVLAKYRAQRMAQMQSRV-RPTFGMFREIGVGQFLKEVDMEHKETPVLIHLYERYIPECAWLNRHLTN--------------------------------------LASKYGYVKFLRLVASHADKDFDHLALPTIQVYRGGDLQCNLVRVSDDMEELGGEAFELDDCEAVLLGH 251
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A7S3GW90_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GW90_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.680e-15
Identity = 57/179 (31.84%), Postives = 83/179 (46.37%), Query Frame = 1 
Query:  442 EEFLGSYRRRRLEQLK----ASAGRPH------FGQIRETDRTSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLL 948
            + F+  +R +RL++L+    +SAG  +      FG ++E     FV EV+ E     VVVHLYEP +  C R+N  L+ I                                      A  QPT+KFLR++ S+ +   D +ALP L +YR GE I  +  +  D G+ FT  D+EWLL
Sbjct:  153 DAFMREFRAKRLQELRGASSSSAGANYTEQTSMFGSVKEVRAEDFVQEVEGEKRNVVVVVHLYEPSVQTCIRLNVLLDEI--------------------------------------AASQPTIKFLRMQASSNEIVVDRVALPILTVYRGGETIETLAGIAADFGQYFTKADIEWLL 293
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BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Match: A0A8C4ZMG3_GADMO (Phosducin-like n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4ZMG3_GADMO)

HSP 1 Score: 87.8 bits (216), Expect = 2.410e-15
Identity = 66/205 (32.20%), Postives = 95/205 (46.34%), Query Frame = 1 
Query:  439 DEEFLGSYRRRRLEQLKASAGR-PHFGQIRETDR-TSFVSEVDTEDPRTFVVVHLYEPYIGACGRMNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQPTVKFLRLRTSAADES--YDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTLDDVEWLLQEHDVFEAPQKPGASLTEHSGTNGALQHEHQ 1041
            DE+FL  YR +R+EQ++   GR   F Q+   +    F+  +D ED  T V++H+YE  +  C  M               GS L LA+                        + P VKF  +R+ A   S  +   ALP LL+Y+AG++IG   RVTD +GE F   DVE LLQE+ +   P KP   + +       +QH H+
Sbjct:  134 DEDFLQHYRTQRIEQMRRQLGRGKRFAQVLSLESGEEFLEALDNEDKSTLVMIHIYEHEVPGCEAMR--------------GSLLCLAQ------------------------EYPLVKFCCVRSGAISTSALFRGSALPALLVYKAGDLIGNFVRVTDQLGEDFFAVDVEALLQEYGLL--PDKPATVMPKTIRNGAIVQHLHE 298
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig994.21229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Z4_9PHAE6.300e-7151.34Phosducin domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKQ5_9STRA3.070e-4637.39Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7R9UGG9_9STRA7.120e-3632.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B798_9STRA9.460e-2532.78Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RCN5_9STRA2.260e-2236.11Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F4NRT6_BATDJ1.560e-1834.39Phosducin domain-containing protein n=2 Tax=Batrac... [more]
A0A8C3ZX36_9TELE3.690e-1735.86Phosducin like n=1 Tax=Denticeps clupeoides TaxID=... [more]
A0A0L0T5G2_ALLM39.810e-1735.59Phosducin domain-containing protein n=2 Tax=Allomy... [more]
A0A7S3GW90_9STRA1.680e-1531.84Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8C4ZMG3_GADMO2.410e-1532.20Phosducin-like n=1 Tax=Gadus morhua TaxID=8049 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig994contigF-serratus_M_contig994:73378..81664 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue4.9e-34
Seed eggNOG ortholog2880.D8LEJ7
Preferred namePDCL
KEGG koko:K08327,ko:K15690
Hectar predicted targeting categoryother localisation
GOsGO:0001750,GO:0003008,GO:0003674,GO:0004857,GO:0004859,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005929,GO:0006139,GO:0006457,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0007186,GO:0007600,GO:0007601,GO:0007602,GO:0008150,GO:0008152,GO:0008277,GO:0008589,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0016043,GO:0018130,GO:0019438,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030234,GO:0032501,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0042995,GO:0043005,GO:0043086,GO:0043226,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044441,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0045880,GO:0046116,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050790,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051606,GO:0051716,GO:0055086,GO:0055102,GO:0061083,GO:0061084,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098772,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902605,GO:1903332,GO:1903333
EggNOG free text desc.heterotrimeric G-protein complex assembly
EggNOG OGsKOG3171@1,KOG3171@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons4
Model size1811
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig994.21229.1prot_F-serratus_M_contig994.21229.1Fucus serratus malepolypeptideF-serratus_M_contig994 77125..80972 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.5403078-UTR-F-serratus_M_contig994:73377..736681622932791.5403078-UTR-F-serratus_M_contig994:73377..73668Fucus serratus maleUTRF-serratus_M_contig994 73378..73668 +
1690964477.6208417-UTR-F-serratus_M_contig994:73377..736681690964477.6208417-UTR-F-serratus_M_contig994:73377..73668Fucus serratus maleUTRF-serratus_M_contig994 73378..73668 +
1622932791.5659583-UTR-F-serratus_M_contig994:76788..771241622932791.5659583-UTR-F-serratus_M_contig994:76788..77124Fucus serratus maleUTRF-serratus_M_contig994 76789..77124 +
1690964477.6351807-UTR-F-serratus_M_contig994:76788..771241690964477.6351807-UTR-F-serratus_M_contig994:76788..77124Fucus serratus maleUTRF-serratus_M_contig994 76789..77124 +
1622932791.6449702-UTR-F-serratus_M_contig994:80972..816641622932791.6449702-UTR-F-serratus_M_contig994:80972..81664Fucus serratus maleUTRF-serratus_M_contig994 80973..81664 +
1690964477.6747541-UTR-F-serratus_M_contig994:80972..816641690964477.6747541-UTR-F-serratus_M_contig994:80972..81664Fucus serratus maleUTRF-serratus_M_contig994 80973..81664 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932791.5856874-CDS-F-serratus_M_contig994:77124..772561622932791.5856874-CDS-F-serratus_M_contig994:77124..77256Fucus serratus maleCDSF-serratus_M_contig994 77125..77256 +
1690964477.64573-CDS-F-serratus_M_contig994:77124..772561690964477.64573-CDS-F-serratus_M_contig994:77124..77256Fucus serratus maleCDSF-serratus_M_contig994 77125..77256 +
1622932791.6060774-CDS-F-serratus_M_contig994:77679..778891622932791.6060774-CDS-F-serratus_M_contig994:77679..77889Fucus serratus maleCDSF-serratus_M_contig994 77680..77889 +
1690964477.6550002-CDS-F-serratus_M_contig994:77679..778891690964477.6550002-CDS-F-serratus_M_contig994:77679..77889Fucus serratus maleCDSF-serratus_M_contig994 77680..77889 +
1622932791.6299136-CDS-F-serratus_M_contig994:80822..809721622932791.6299136-CDS-F-serratus_M_contig994:80822..80972Fucus serratus maleCDSF-serratus_M_contig994 80823..80972 +
1690964477.6647124-CDS-F-serratus_M_contig994:80822..809721690964477.6647124-CDS-F-serratus_M_contig994:80822..80972Fucus serratus maleCDSF-serratus_M_contig994 80823..80972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig994.21229.1

>prot_F-serratus_M_contig994.21229.1 ID=prot_F-serratus_M_contig994.21229.1|Name=mRNA_F-serratus_M_contig994.21229.1|organism=Fucus serratus male|type=polypeptide|length=164bp
MNRFLEVICRSMKPDEGSALGLAEGIFRRDRLDGTPSCWNPIVRVLATKQ
PTVKFLRLRTSAADESYDPIALPTLLLYRAGEVIGCMTRVTDDIGESFTL
DDVEWLLQEHDVFEAPQKPGASLTEHSGTNGALQHEHQPAHQLATGRGRK
GEALDSDDEADSY*
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mRNA from alignment at F-serratus_M_contig994:73378..81664+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig994.21229.1 ID=mRNA_F-serratus_M_contig994.21229.1|Name=mRNA_F-serratus_M_contig994.21229.1|organism=Fucus serratus male|type=mRNA|length=8287bp|location=Sequence derived from alignment at F-serratus_M_contig994:73378..81664+ (Fucus serratus male)
GGCGATCTCGAGGACAAGATACTGAAAAAGAACATTCCCGGAAAATTCTC
TTGGTGGGAGAAAGACAGCGATGAGGAGGGGAGGGGGCGAGGGCGGATTG
GCTGGACGGCGAAGCCAGCGACCCCGAGGCAGAGCTGTCGGAGCTGCAGA
AGCAGCAAAAGTGGGTGGAGAACGATTGTCCCGAGCCCATCCGACGCACG
ATCATGGCGCGGGAGGAGAAGGAGCGGGCTAGGACGGGAGTCAAGGGAGT
GCTAGCAGACTATGGCGACTGGAAGCGCTCGAAAAATGCAGGTCAGACGA
ATGAACCAAGCACAATTACCACCGCCCTTTGCCTCTCTATCGTAGATCCA
GCCTCTGTCCTGCGCTTCATTCAGGCTCCTTCATTAACGGCGGACGACTT
GAACCACTGGTTCGGCGAGGTGTAATGTTGTAAGGCCGAATTTGCGTCGC
AATAAAAAGAAAAGCATGGACATGAACCCCGGGAAGAGACGGATATATAT
ATTATCTAGATCCTGTTTGAACCAGGGCAGCGTTGCAGCAGCTTGGACTG
ATAATCTTGGCACGTTGAATGCACCGGCAAGCAGAACCTCCCAGACCGCG
AATGTTGAGGATAATGAATACCGTTACACTCCTAGGATACATACCGGTAG
AGATCAAAAACAGTGGTTACTATTATAGCTTCCGTTCTCTCGCGACCAAA
CCCGACCTATTAGGGTGTTTGCAAAAAAGGGAATTACGTCGCCGAGTTTC
TTCGTGACATTTCCACGTAAAAGGCCACGAAATTCGTCCCTATTAACGGG
GCCCCCACGCACTTGGGCCGAAAAATATAGTTTCCAAACGTAAGGGCATC
ATCGGCACAAGAAAGGCGTGAATACGGGCGTTTTTGCCTCAAATTGCAAT
TTTGGTATAAACAATTTGAGGTGCGAGACCGCTGCTGTCCCCACCGCCAC
ATCTTCCAAACGTAAGAGTGCATAGTGATGTATCTTTGTTCAGAAGGAAG
TTTTGGACTTCGAAGGTCATGTACCGAGGTTCGGTGGCCGACTTTTCGGT
GGTTTTGTGTACTCTTACAGCAGTAGGAACAACAGCAGGTTCTCCGCTCT
TGAGCCTGACATCGCCCCCGAGACCGCGGTTTTGCGCAGAAGACCTCCTA
AAACCCTGCTGGAACACCCTCCGACGAGGACAACCTTCTACATGCCACTA
AGCCGAAGAAAGTTGTCTAAATGTGTGTAGTCACCTTCTGTGGCATTTGT
GGTGGGATTCCCGGGTTTACACAAAACTACCGAAAAGTCGGCCGCCGAAC
CTCGGTACATGACCGTCGAAGCCCAAAACTTCCTTCTGAACAAAGATACA
TGACTAGTCTATGCACTCTTACGTTTGGAAGATGTGGCGGTGGGGACAGC
AGCGGTCTCACACCTCATGATACCAAAATTGCATTTTGTGGCAAAAATGC
CCGTATTCCCGCCTTTCTTGTACCGATGATACTCTTACTTACGTTTGGAA
TATTTATTTTTCGGCCCAAGTGCGTGAGGCTCCGTTAAGTGTTTGCAAAA
ATTACGGAGGGACTTGCGTACAAACTACTGGTGAACGCCTGGGGTTGTGA
GGCCCGTTGTTGTGGGCGGGGTTTTCCCGTCAGAATGGCCACCTCTCCCA
GCTCATTTTTTTATTTTTTATTTTATCACACCTATAGCCGATGGACCTCA
TAATTACCATCCTGCCTGTTGTCACAAAGGATCTTCCCATCTCTCCCCGC
TTCATGCCTTACAATTTTTATCACGATGCAAGTTCAGCACTCTTACAACT
CGTCAACCAATGGTTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTT
ACGAAAGAATGAAAACAAATCCTACTTTGGTAAGAATCGAACTCACGACT
TCCGCACTAGCAGGTGTGCAGGTTACCTACTAGACCACTCGGGCTCTGCT
TTGTTTAAGGCCAGCAAAACACCGCAGTATAGCAAGCGACGGATGCGCAA
ACGCTCCCGAGCACAGAGACCGCTGACGAGCTGGTGCAGGTTTGAGGTAG
CGAATCTCTCGTTATACATCCGTCTCCTTGCCCACAGTCCTTGTTGAACA
TCAGATACATTTTCCACGATTTTTTCTGATCCCCACGAAAGTTTCATTTC
CGTGGAAAGGCCTACTGTATTTCAGTGAAACATTGGTTGGGAATGAGAAA
GATTTCCGTGGGAAAATTATTTCCCACGGAAATCGACCAAGGAATTCCTT
GTCTGCAAACACCCTATTCTACAGAGAGTACAATGAATCGTCAGACACGC
AAAAAAATCTGAGCGAATCTCTCCATAAACCTTTTGAGCATCATCCACCC
GATCAGGTCATATTAATGGTCAGATAGAAAATTGTCAAAGCGTTTAGGTG
GAAACATAGGCCATAATGTAATAACAAAACCTCTTCGTGGGGTTTAGTTG
GTTTCATCCCCAATGGTAGTAGGATAGGGTCAACAAGCAGTATCTATGCT
CATGACATATATCAAGGGTAAGGATCAACCGGGTAAGGTTGCAAATCCTA
TTCGTGGTCAGCTGAACAGGGAAAATTAATATTTGCCCTGTCCCTGTTCG
CGCCTGAGAATTTGGTCTCGCAAGACGGTTTCGGCAGTTCCGTCCGGCGT
CTGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTATATTATCGGGGAG
AAACCCACCGCCGATACTTTCAACATGCCCACTTCATACCAATAGTGGGT
GTGGGAAAGAGAGGCGCATGTTAATTGGTCTATGGTGACCTGCCAAGGCA
GCATCCGTTCGGAACTACCTTGAGGTTTACTGGCGCTGTGCCGGCGGACT
CTCGGCAGTGAACTCCATCGGTACGCAATTGCGTGACCCGATAAACTATG
GACTGACCCGATGGCGTATGGCGGTTTAAATAAGTAAATGGACGCCGCCG
CGGAAATCAGGATGAATCCCGTAAGTAAGCACCATATTTAGCCTGAGTAT
GGGGATGAGCAGGCTGACGCGGAACGGTACTGCCGAACCCGTCTCGCGAG
ACCAGATTCCCAGGCGCGAACGGGGACAGAGGATCATTATTTTTCCTTTT
CAGCTGACTACGAGGAGGATTGGCAACCTTACCCGGTTGATCCTTACTCT
TGCTATATGTGATGACCATACATACATACATACATAAACGCCGTGATATA
TATACTTGGGGTTGGTATTATGGGGTTCAAGTGCAAGTGATGATAAATCA
AAGTGGATCGTTGGATGGATGCGTTAGTTGTATAGGGTCAATATTATAAT
ATCGATGAGAGAGTGTCAAAATGCTTAGCTGGGAACGTGATCTTTAAAAA
CAAACGGTCTTCTTAAAATAAGTTCCCCTTTTTTGCTGTTCGTCCCTCAC
CCTCATCCAAGAGGCCCTCCTCGCCAAGGAATACCGAGCCGCAATGCTCA
AGCGCATGACGGAAGGCCACATCGTCCCGGGATCCGCTCCGCCCCTCCGG
AGGAAAGCCCAGGGGCGTCGACGACGACGAAGAGGAGGAAGACGAGGAAA
ACGCGGGCGACGAGGAGTTTCTGGGAAGTTACCGAAGGCGTCGGTTGGAG
CAGCTGAAGGCTTCGGCGGGTCGTCCGCATTTCGGTCAGATTCGAGAGAC
AGATCGCACCAGTTTCGTCTCAGAAGTCGACACCGAAGACCCTCGGACCT
TCGTCGTTGTGCATCTGTACGAGCCGTACATTGGGGCGTGCGGTCGCATG
AACCGCTTCTTAGAGGTGATATGTCGCTCTATGAAACCTGATGAAGGCTC
CGCGCTTGGCTTGGCAGAGGGAATTTTTCGGCGGGATAGGTTAGACGGGA
CACCGTCTTGCTGGAATCCCATTGTACGAGTTGCTTTACCGTATTGCGAT
CATCCAGTCACCTCGCTCGCCGATGCACATGTGCGGGCCACGAAGTCACG
CGCAACCCTATAAAAGGTTGCAACCTTCTCGCCCGATGATCACGTCTCTC
GGTCGGTACGCTGGAACGATCACCATGATGTGCTGCGAGAGCCACGAAAG
CTTCCCGGCGGAGCGTGTGGTGGTAATCGAACCCACCCGTGCATATGTAC
ACATACTTCGTACACAAGGCAATCGCGCGAGCGTGCCCACTTATAGTACT
ATTAATGCGTCATCTAACGACGGATACTCAAAAACCCAGACCCTCGTTTC
CCAACAAGGCCTTGCGCTCCCCCCCCCCCCCCCCCCGCCGCCCCCCAAAG
CCTTTCCCTTCCTGTAACCCCCCCCCCCCTTCCCTCCCTCCCCACACCTC
AGGTGTTGGCAACGAAACAGCCCACGGTAAAATTTCTGCGGCTGCGGACC
TCGGCGGCTGACGAGTCGTACGACCCGATAGCGTTGCCGACGCTGCTTCT
GTATCGCGCTGGCGAGGTGATCGGGTGCATGACGCGGGTAACGGACGACA
TCGGGGAGAGCTTTACGCTGGACGACGTGGAGTGGTTGCTCCAGGAGCAC
GACGTTTTCGAGGTGTGTGCAGTAGGCGACCCTCTGGTCGAGTGTCCAGC
AACCACAAATGCGGCGACAGAAACCACAAATTTAGTGCTCTGTACATATA
TATATATGCATATATTCAGTACTAGGAAACTGTTGGTGCCTTTCAGCTTG
TCTGCCAATCTCTCTTAGATTAAAATTTTACTCGTCGCACAAGTGGCGTA
GAACTGATGGCTTACGGCGTGTAGACCATTGCTGCGGAATTCATGAAATC
GAGTTCGTCACGCGAGTGTCGTCACGACTCTATTGTCAGGTGTTGTTGTA
TTTGTTGTCGTTGACTCACACATTCAGCGTAGTGTCCTTGCAAATGAAGA
ATCTACGGTGACACAACAAGTCAGCCACAGACCTATCAAATGCCAATCGC
GCTCGTGATCACAAAGTGGTACGAAGGCCAATGGGTCACATCATGGTGAC
AGCCCGCTACTCAAACCAACAGGGATCCGAGTCGCGACAAAATCCTTGCA
AGGTCCAACCAGCCGAGAACATAGGAAACTTATCGACGTCAAGATGTTGT
CTTTGGGTACGAACTTCAGTTTCTACTGTCGAGAGCGCTGCCAGTATTTC
AGAATCTGAATTACAAGCTACAGAGAAAGACTGTCTGATGTGATGCCCAT
CCAATAAAGTCATCAAAAGTGACTCAAAAAGTGTTTCTAGCTATCGGAGG
GTTACACAAACACGAGTTATGCGACACTTCACAAGCAACGGCATCGACCA
ATGGGATTCGTTTGATTCTGCTCTCCGTATTAATAGCGAAAAGGTAGAGA
GAGCGAAAGTAAGCAAACTTCAAGCATTAGTTGATAAAGGGCAAGGTGCT
CAACTTGCATCGCGATAAAAATCATGGGCGTTAACCGAGGAGAGATGGGC
AGGCAGATCCTTGCGTAACCGCAGGCGGGATGGCAACGTTGCAGTAGGCG
ATCGTTAATCTGTAAGAGAACGATTGATTTGAGCCCATCGGCAGATATTG
TGAATGGACCAACACAACAAAACATGTTTAAACAGATGAAATAGTAACCC
GGAAGCACCAAGCTATTGACATCACCCTGTTGGGCATCTACCAAGAACAT
CGCTTCCAGGCACTTCCGCTCAGCAGTGCCTCCGCCAAGAGAAACACTCT
TTCTCATCCCTCAAGTACTGTTTGCCCTGGCAGAAGCGCTCTCGAACAAT
CTCATCATGCTGTTGTCTCAGCCCAAGATGCAAATATCATAGTCGCTGTC
TCTGCTGTTGGAGCCCATCATGGGCCACCTAGCACCGCACCGCACTAGCG
TTCGTTACCTTTTGCCTCGGATGTCACCGCCGATCTTCGAGGAGCAGCCC
CATTTGTTTCGTCAGGTTCCTCTTGCAAGTGTCATGCCCCTTTTGGTTGG
TCGGTATGGACCGACTCCATGAACAGTTTGAGAGGTCGTTCTCCGCCGGA
CCAGAACCGCTACAGCTCGCCGCTCGCCCACGAGGTTGGATGTGTGCAGC
AATCCAGGGTCGAGTTGCATAGCTCACAGAGAGCGGGAAATATACGTTTG
TATGGTATAGTCATTGCTTGTAGCAGAGGATATGGATCAACCGGGTAGGG
TTCCAAATTCCGCCCGTGGTGAGCTGAGCAGGGAAAGTTAATATTACCCT
GCCCTCTTTTGCGTCTGAAAAATTGGTCTAGCTAGACGAGTTCGGCCGAC
CATCCCGCGTAAACCCGCTAAATCTCCGCACTTGTGGTGCTTCTCACGGG
ATCCCCCCGCTTTCCGCGGTGGTGTCTACTTATTTATACCGCCAACCGCC
ATCGGGTCAGTCCCTATTAGAGGTTATCAGGCCACACAGTTGCGTACCAA
TGGCGTTCACTGCCGAGAGTCCGTCGGTACAGGGCCAGTAGTCCTCAAGG
TAGTTATTCCAGTATTAGTAACGGGTGCTGCTTTTTCGGGTTATCAGCAT
ACACCCATGACCAACTCTTGCGCGCCTCTCATTTTCCACACCCACTATTG
GTATGCAGCGGACATGTTGATAGTATCGGAGGCTGTCAGTAGACTATTGA
CCACAACAGTCCAAGCGAAGAATGGACAGATGATCTCTAGGCGACTATCG
GGAAATCTCGCTTGGGTCCCTCAGTAATGGCTCGAGATCACACACGTACT
GTACTGTGCTGTACTGTACTGTGCTGTACTGTACTGTACCACGAGCTCAG
TCCCCTTTTCGAGATACCAGGTAATACATCTGTCTTAAAAAGCTATCTAT
GGTTGCTGAGACAAGACATGTTTTAACGAGAACAGGTCGTGTGGAGAGGC
TAACATGTAATATCATTTTGATTATTAGAAAAGGGGCTTGAGGGGAGATT
CTGAGGAGAGAGAGACCCTACAGCAGTATGTTACGATGTCGCTTACTTCG
TATCTCTCTCCCTATTTTCTTCATAGGCAAATCGATTAGCCCCCCCCCCC
CTATCCCCGTGGATGAAAAAAATACCAGGTATGTTTTTGTCCCTGCAGCT
CTGCTCTAAAATACTCCTCTCGTGTGAAGAGAGACCAAATGCGGTCAGAT
CGCTAACTACCTATCTTTTCACTTTTTGTTGTTGTATTTCACTTACGGCC
GAGGGCCTCAACGTATCTACTACAACGTTGCCATTTTGCCTGTGGTCACG
AAAGATCTTCCCATTTCTCCCCGGTTCTCGCCGCATGAATTTTATTGCGA
TAGAAGATCTGCCCTCTTACAACTCGTCAACAAGTGATTGTTGGCATTTT
TTTTACTCGCATTCTCACGCTTTCCGCTACAGAAGCCAGAATACAAAATT
TGGTTTTGACAATGATCGAACTCACGGCTTCCGCACTAGAAGGTGTTCGT
GGTTACATACATTGTACGGTACTTTTTATAGCCCTGTTAAACATCATACA
TCTCCATGCAGTCTAACTTGAAGTGATTCGCACGTCCGACCGTAGGCGCC
CCAGAAGCCAGGTGCATCGCTCACGGAACACTCAGGGACCAACGGTGCGC
TTCAACATGAACATCAACCTGCACACCAGCTTGCAACGGGCCGGGGACGA
AAGGGAGAAGCACTGGACAGTGACGACGAGGCAGACAGCTATTAGTATAA
CAAATAATGTACAAGCTTCTTCCTGTTCGATGCTCATCATATCGGGAGCT
GTGCCAACCCTGAGATATGTCATCTAGTTTAGCAATCAGGAGCTATCATA
GCTGCGCTACCCTGCGAGGTGTGATCTAGTTTAGTAATCAGGAGCTGCGC
TTCCCTGAGATATTCGATCTGGTTTTAGTTATAGACCGTAAAATCGAGGG
GTCGAATTTATTTAGGCGAGCATTATTGCGAACGTTCTTCTGGTCTTTGT
GTCGGTTTTAGTGTATAAATAGTATCTGTAGTGAATAATGATCCATTTTG
AGTCCCTGGAAAACACCTACCAGGTACGCCCAAGAAGAGACTCCAGGGTG
AGAGCGAACGGCGTTCGCGCTTGCGTTCCAACGTTGGTTCAGTAGATTTG
AAAGTTTTGTTCGTGGCATGACATTTACGAAGACTACAAACTTTCCCCTA
TCAAATACGATAGACTTTGAACTCAACCTCTTCGATTTGGAAAAGCTACA
CGGCACGTTGTCTCAACAGCTACTGTACATACAGAAGCGAGATTCTTGGA
CGTCTCTAACGCACTTGTACAAGCAGTGGCTGGTTGCAACGGCGTTGAGC
GAATCCTATTATGGTTGCAAACGGTGCAGATAATGACGCCCTTGCTAAAG
CTATACCAGTAGCTCCTTTACCATAAATCGAAGAGTT
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Coding sequence (CDS) from alignment at F-serratus_M_contig994:73378..81664+

>mRNA_F-serratus_M_contig994.21229.1 ID=mRNA_F-serratus_M_contig994.21229.1|Name=mRNA_F-serratus_M_contig994.21229.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig994:73378..81664+ (Fucus serratus male)
ATGAACCGCTTCTTAGAGGTGATATGTCGCTCTATGAAACCTGATGAAGG
CTCCGCGCTTGGCTTGGCAGAGGGAATTTTTCGGCGGGATAGGTTAGACG
GGACACCGTCTTGCTGGAATCCCATTGTACGAATGAACCGCTTCTTAGAG
GTGATATGTCGCTCTATGAAACCTGATGAAGGCTCCGCGCTTGGCTTGGC
AGAGGGAATTTTTCGGCGGGATAGGTTAGACGGGACACCGTCTTGCTGGA
ATCCCATTGTACGAGTGTTGGCAACGAAACAGCCCACGGTAAAATTTCTG
CGGCTGCGGACCTCGGCGGCTGACGAGTCGTACGACCCGATAGCGTTGCC
GACGCTGCTTCTGTATCGCGCTGGCGAGGTGATCGGGTGCATGACGCGGG
TAACGGACGACATCGGGGAGAGCTTTACGCTGGACGACGTGGAGTGGTTG
CTCCAGGAGCACGACGTTTTCGAGGTGTTGGCAACGAAACAGCCCACGGT
AAAATTTCTGCGGCTGCGGACCTCGGCGGCTGACGAGTCGTACGACCCGA
TAGCGTTGCCGACGCTGCTTCTGTATCGCGCTGGCGAGGTGATCGGGTGC
ATGACGCGGGTAACGGACGACATCGGGGAGAGCTTTACGCTGGACGACGT
GGAGTGGTTGCTCCAGGAGCACGACGTTTTCGAGGCGCCCCAGAAGCCAG
GTGCATCGCTCACGGAACACTCAGGGACCAACGGTGCGCTTCAACATGAA
CATCAACCTGCACACCAGCTTGCAACGGGCCGGGGACGAAAGGGAGAAGC
ACTGGACAGTGACGACGAGGCAGACAGCTATTAGGCGCCCCAGAAGCCAG
GTGCATCGCTCACGGAACACTCAGGGACCAACGGTGCGCTTCAACATGAA
CATCAACCTGCACACCAGCTTGCAACGGGCCGGGGACGAAAGGGAGAAGC
ACTGGACAGTGACGACGAGGCAGACAGCTATTAG
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