mRNA_F-serratus_M_contig991.21216.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Match: A0A6H5K8V7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V7_9PHAE) HSP 1 Score: 205 bits (522), Expect = 4.390e-54 Identity = 145/442 (32.81%), Postives = 213/442 (48.19%), Query Frame = 1 Query: 2158 LQRVKESVESLVGVMKAYQNGGKLSQVLMASVYRKRHADAEEAVRMMLQYFQTHLAVHXXXXXXXXXXXXXXEIEKLKEEITELISKIDPGPHALRRKVD-----SMGE----RRAKLLGNMEIAIEDIKISDNVLGEGVSGKVYFADYRGFNAAAKIMELEGDRNEK--------------------KQRNAFLNELQHMKRLASAHTVQVFGVVTSESGKLTLVMELMPGGDLFLYMRKKREENQAIPEKIARRLIGDVAAGMEFLHSSNTWHGDLKSPNVLLDASDRAK-ISDFGTSHWTEQTKSKSVQSNCRISGTAWFDTLTFRWAAPEVLSAPEEQQLTRRQARTTPVAASPRPTTRLSFKSDVYSFAIIAWEILSLKVPWDNLSS-REIYLLVCGKQDRPRIPEGAPPDLADLVRQCWDASPERRPTSRQILDRL 3390 +Q V E++ L ++K YQ+ KLS+VL+++ ++++ + + V + Q V+ + + + P +R +D S+ E RR + L +EI + + ISD +LG G GKV+ A + G NAAAK++ ++ D + QR FL E+ M RL S HTV +FG +TS +L LVMEL+PGGDL ++ Q +PE+ +R +IGD+ AGM FLHS T HGDLKS NVLLD RAK + G + +T ++ K+ S F W+APEVL A T + SDVYSF I+AWE+ S ++PW NL+ +++Y+ V K RP P AP D+ + CW A P RPT I+D L Sbjct: 9 IQDVLEAIFDLNELIKTYQSKNKLSKVLVSTQFKRQQDELDVVVDRAISRLQVRDDVNAVKDGIHVYKVGFNMLPRCVFQTFRSRMNDVPFLAVHQRSIDAAKLESLAEARRARRQRKLDQVEIPEDRVVISDELLGRGGFGKVFLAKFNGRNAAAKVLYIQHDLGRRDDSAILESRKDGHSNAERVNSQRKGFLREMNAMIRLRSPHTVVLFGAITSLPDRLVLVMELLPGGDLQTLLKNSE---QPLPEEQSRMIIGDICAGMMFLHSKETVHGDLKSANVLLDGVGRAKHTNSTGLATYTTKSSQKTQMS--------------FNWSAPEVLDA-----------------------TVSTHASDVYSFGIVAWEVFSRELPWANLAHPKDVYIHVVLKGLRPMFPPDAPADMISMATACWAAEPNARPTFAAIMDGL 410
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE) HSP 1 Score: 183 bits (465), Expect = 3.140e-43 Identity = 104/249 (41.77%), Postives = 142/249 (57.03%), Query Frame = 1 Query: 2635 KQRNAFLNELQHMKRLASAHTVQVFGVVTSESGKLTLVMELMPGGDLFLYMRKKREENQAIPEKIARRLIGDVAAGMEFLHSSNTWHGDLKSPNVLLDASDRAKISDFGTSHWTEQTKSKSVQSNCRISGTAWFDTLTFRWAAPEVLSAPEEQQLTRRQARTTPVAASPRPTTRLSFKSDVYSFAIIAWEILSLKVPWDNLSSREIYLLVCGKQDRPRIPEGAPPDLADLVRQCWDASPERRPTSRQIL 3381 +QR F+ EL+ MKRL HTV ++G VTS +L LVMEL+ GGDL ++K +E + EK+ R+++ DV GM FLH+ T HGDLKS NVL DA+ RAKI+DFGTS WT+ T + + ++ WAAPEVL+ RR + SF+ DVYSF ++ WE LS KVPW ++ + +L +RP IPE AP D+A L + CW P RPT +++L Sbjct: 855 RQRRMFMRELEAMKRLRGLHTVTIYGAVTSLPDRLVLVMELLQGGDLRHRLKKAKEP---LEEKVLRKIVRDVCCGMAFLHAKATVHGDLKSANVLFDATGRAKIADFGTSLWTQHTTRLATYTTMPREMVG----MSLPWAAPEVLN--------RRGS---------------SFEGDVYSFGVVVWECLSRKVPWKGVAGVDKLVLAVTAGERPPIPENAPHDIAALAKACWVHDPAARPTFKKVL 1073
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Match: D7FL77_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL77_ECTSI) HSP 1 Score: 171 bits (434), Expect = 2.570e-42 Identity = 151/512 (29.49%), Postives = 215/512 (41.99%), Query Frame = 1 Query: 1897 PSRSGNAMSKILYATRVTARAAQSSSIYMVP---EVGVLVETLVGLAEDSETNPEVFKKSNELCRWLKVVLERADQLPGLDTDSSG--VSDLLQRVKESVESLVGVMKAYQNGGKLSQVLMASVYRKRHADAEEAVRMMLQYFQTHLAVHXXXXXXXXXXXXXXEIEKLKEEITELISKIDPGPHALRRKVDSMGERRAKLLGNMEIAIEDIKISDNVLGEGVSGKVYFADYRGFNAAAKIMELEGD---------RNEKKQRNAFLNELQHMKRLASAHTVQVFGVVTSESGKLTLVMELMPGGDLFLYMRKKREENQAIPEKIARRLIGDVAAGMEFLHSSNTWHGDLKSPNVLLDASDRAKIS--DFGTSHWTEQTKSKSVQSNCRISGTAWFDTLTFRWAAPEVLSAPEEQQLTRRQARTTPVAASPRPTTRLSFKSDVYSFAIIAWEILSLKVPWDNLSSREIYLLVCGKQDRPRIPEGAPPDLADLVRQCWDASPERRPTSRQILD 3384 P+ SG+A S I V A A + + Y +P E +V + L DS N E CR + + L+RAD++ G D+ G V L++ V ++ L+ + ++ + M S+ H Q+ Q A + E + E R++ RR + +EI E + I+++ LG+G G+VY ADY G NAAAK++ + D + E QR AFL EL+ M RL S +TV V+G VTS ++ LVMELMPGGDL + +E +PE+ +RR++ D+ GM FL S T HGDLKS NV LD S RAK + D G E+ S SF SDVYSF I+ WE+ S K+PW N + L + R P D+ D+ + CW PE R T IL+ Sbjct: 5 PTTSGSA-SDIGLGQAVLAMAEELARSYQIPGVSEAAGVVCIMANLFSDSRENDEASTSRLRQCRSMVLALKRADKVVGKGGDTIGEAVRVLIEDVHAAIFDLLDLQLQARHDMSSMKESMQSMEEGMH-----------QHNQGSTA------------------GTISESVAEA------------RRI-----RRQRKFDQVEIPEEHLFITNDELGKGGFGEVYLADYNGHNAAAKVLRITHDLGAFDENQQQRETSQRRAFLRELEAMIRLRSPNTVNVYGAVTSLPDRVVLVMELMPGGDLQTILTSSQEP---LPEEQSRRIVRDICTGMAFLQSRKTVHGDLKSANVFLDGSGRAKATLVDLGLICMLEEEGS--------------------------------------------------------SFASDVYSFGIVVWEVFSRKLPWANKTRPREILSAVLRGKRSLFHTATPADIVDIAKACWGGEPEERTTFSAILE 410
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Match: A0A6H5JB79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB79_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.320e-33 Identity = 129/498 (25.90%), Postives = 208/498 (41.77%), Query Frame = 1 Query: 1960 AQSSSIYMVPEVGVLVETLVGLAEDSETNPEVFKKSNELCRWLKVVLERADQL------PGLDTDSSGVSDLLQRVKESVESLVGVMKAYQNGGKLSQVLMASVYRKRHADAEEAVRMMLQYFQTHLAVHXXXXXXXXXXXXXXEIEKLKEEITELISKIDPGPHALRRKVDSMGERRAKLLGNMEIAIED--------IKISDNV-----LGEGVSGKVYFADYRGFNAAAKIMELE----GDRNEKKQRNA------FLNELQHMKRLASAHTVQVFGVVTSESGKLTLVMELMPGGDLFLYMRKKREENQAIPEKIARRLIGDVAAGMEFLHSSNTWHGDLKSPNVLLDASDRAKISDFGTSHWTEQTKSKSVQSNCRISGTAWFDTLTFRWAAPEVLSAPEEQQLTRRQARTTPVAASPRPTTRLSFKSDVYSFAIIAWEILSLKVPWDNLS-SREIYLLVCGKQDRPRIPEGAPPDLADLVRQCWDASPERRP 3363 A+ S + + +V +L+ L+ L E+ +++ + C + VL AD++ +S L+Q+V+E + L+ ++ +Y++ Q+ ++++R E V+ L L EI ++ +G + A + M + D + ++V LG+G G+V+ DY+G N A KI+ ++ GD + + A F E+ M L S HTV + GV+TS +L LVMEL+ DL ++R + +PE+ +RR+IGD+ AGM FLH++ T HGDLKS NVLLD +DRAK+ + G + SF SDVYSF ++ WE++S K PW L+ S ++ V Q RP IP G PPD+ + +CW P RP Sbjct: 1236 AERSKVPGISDVAMLLVKLLDLVEEHRVQVAEARETAKWCHGVLHVLTAADRVLREVGGTFFVRSNSWAHTLVQKVEEVINDLLQLIHSYKSRNAFLQLFTTKLFKRRKEQLEAVVKQALSDLDVSLTPASKFAMGVHIGSNVNEIRXXXXXXXXXXXXXXXXXXXXADVLNRLGSQVADMKRCMRTILSDGRSRCAQPLLFKEDVNRMDWLGKGGFGEVFSGDYKGKNVAIKIIYIDHGLNGDGSAQMAERASSKHKEFKREVDVMYHLKSPHTVLLHGVITSHPDRLELVMELLQQ-DLGTFLRNAKVP---LPEEDSRRIIGDICAGMAFLHNNFTIHGDLKSANVLLDENDRAKV----------------------LHGA------------------------------------------KNSFASDVYSFGVVLWEVMSRKTPWSELARSDAVFYRVFVLQQRPEIPTGTPPDIQKDMNRCWAHQPTNRP 1665
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Match: A0A329SU07_9STRA (Protein kinase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SU07_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.760e-32 Identity = 104/318 (32.70%), Postives = 150/318 (47.17%), Query Frame = 1 Query: 2512 DIKISDNVLGEGVSGKVYFADYRGFNAAAKIMELEGDRNEKKQRNAFLNELQHMKRLASA----HTVQVFGVVTSESGKLTLVMELMPGGDLFLYMRKKREENQAIPEKIARRLIGDVAAGMEFLHSSNTWHGDLKSPNVLLDASDRAKISDFGTSHWTEQTKSKSVQSNCRISGTAWFDTLTFRWAAPEVLSAPEEQQLTRRQARTTPVAASPRPTTRLSFKSDVYSFAIIAWEILSLKVPWDNLSSREIYLLVCGKQDRPRIPEGAPPDLADLVRQCWDASPERRPTSRQILDRLGRNRR*EGRPFARTAMLKRPF 3453 ++K+ V G G SG + A + G + AAK+++L ++K N L EL+ + +ASA + VQ G TS + LV E M GG L +R K + RL D+A GM +LH + H DLKS NVLLDA AKISDFG S E +S + +T T+ W APEV+ R P ++ K+DVYSFA++ WE+L+ +P+ + + + V Q RP +P PP +A+L+ CW+ P RRP I+ L PF + + K F Sbjct: 25 EVKLGKAV-GAGRSGSTFSAHWNGRHVAAKVVDLSAA-SKKSLANELLKELRREEEVASALRHPNIVQFLGS-TSAPPRYCLVFEFMEGGTLTALVRAKSKAPLDF-----FRLANDMAQGMSYLHEHSVMHRDLKSSNVLLDAQGTAKISDFGLSCVMEVGRSADRTA----------ETGTYGWMAPEVI-------------RHEPYSS----------KADVYSFAVVMWELLAKDIPFKGQTPMQTAMAVAEHQMRPALPRNTPPKIAELIEHCWNQDPTRRPDFSAIVKVL---------PFVKQTLSKTDF 292 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig991.21216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig991.21216.1 >prot_F-serratus_M_contig991.21216.1 ID=prot_F-serratus_M_contig991.21216.1|Name=mRNA_F-serratus_M_contig991.21216.1|organism=Fucus serratus male|type=polypeptide|length=1013bp MLSRWLREALTGGVLLAFVVGVVSGQDDRDTLNTLYSLLGGTSWTNSYGWback to top mRNA from alignment at F-serratus_M_contig991:164751..282011+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig991.21216.1 ID=mRNA_F-serratus_M_contig991.21216.1|Name=mRNA_F-serratus_M_contig991.21216.1|organism=Fucus serratus male|type=mRNA|length=117261bp|location=Sequence derived from alignment at F-serratus_M_contig991:164751..282011+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig991:164751..282011+ >mRNA_F-serratus_M_contig991.21216.1 ID=mRNA_F-serratus_M_contig991.21216.1|Name=mRNA_F-serratus_M_contig991.21216.1|organism=Fucus serratus male|type=CDS|length=6078bp|location=Sequence derived from alignment at F-serratus_M_contig991:164751..282011+ (Fucus serratus male)back to top |