mRNA_F-serratus_M_contig990.21207.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: T0S3Y7_SAPDV (Robl_LC7 domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0S3Y7_SAPDV) HSP 1 Score: 115 bits (288), Expect = 1.300e-27 Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 NEVEE IK LK PGF +Y++MNNDGIVIKYE+MEY+ AV HA IL+L ++SKK++ +LF+ ++++E LRLRT+ HEMIIA + FTL V+Q Sbjct: 7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKMAVMHAYHILNLYARSKKYLTKLFDAAESDIECLRLRTKLHEMIIAQYAKFTLVVLQ 100
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A0W8DKJ7_PHYNI (Robl_LC7 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DKJ7_PHYNI) HSP 1 Score: 114 bits (286), Expect = 3.200e-27 Identity = 54/96 (56.25%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 NEVEEVIK LK+ PGF++Y++MNNDGIV+KYE++EY+ A+ HA +L L ++KK + +LF +P ++E+E LRLRT+ HEM+IA H FT+ V+QQ Sbjct: 7 NEVEEVIKQLKSKPGFTSYILMNNDGIVVKYENLEYKEAIMHAYHVLSLYGRTKKHLHKLFPDPNESEIEWLRLRTKMHEMVIAQHLRFTIVVLQQ 102
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A418AKU6_9STRA (Robl_LC7 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AKU6_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.250e-27 Identity = 57/94 (60.64%), Postives = 75/94 (79.79%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 NEVEE IK LK+ PGF +Y++MNNDGIVIKYE+MEY++AV HA IL+L ++SKK + +LF+ + E+E LRLRT+ HEMIIA + FTL V+Q Sbjct: 46 NEVEETIKALKSKPGFFSYIVMNNDGIVIKYENMEYKSAVMHAYHILNLYARSKKHLSKLFDASECEIECLRLRTKLHEMIIAQYTRFTLVVLQ 139
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A662WHZ4_9STRA (Robl_LC7 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHZ4_9STRA) HSP 1 Score: 114 bits (284), Expect = 6.210e-27 Identity = 54/101 (53.47%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSAK 312 +E+EEVIK LK+ PGFS+Y++M+NDGIV+KYE++EY+ A+ HA +L L S++KK +++LF +P D+E++ LRLRT+ HEM+IA H FTL V+Q+ +A+ Sbjct: 7 SEIEEVIKQLKSRPGFSSYLLMSNDGIVVKYENLEYKEAIMHAYHVLSLYSRTKKHLQQLFPDPSDSEMDWLRLRTKMHEMLIAQHLRFTLVVLQEPEAAE 107
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: W4H2Y7_9STRA (Robl_LC7 domain-containing protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4H2Y7_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.470e-27 Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLRLRTREHEMIIALHDNFTLAVIQ 294 NEVEE IK LK PGF +Y++MNNDGIVIKYE+MEY++AV HA IL+L ++SKK + +LF+ + ++E LRLRT+ HEMIIA + FTL V+Q Sbjct: 7 NEVEETIKALKAKPGFFSYIVMNNDGIVIKYENMEYKSAVMHAYHILNLYARSKKHLSKLFDASECDIECLRLRTKLHEMIIAQYTRFTLVVLQ 100
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A0P1A807_PLAHL (Dynein-associated protein Roadblock n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A807_PLAHL) HSP 1 Score: 112 bits (281), Expect = 1.630e-26 Identity = 56/97 (57.73%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 10 VNEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 +NEVEEVIK LK+ PGFS+Y++MNNDGIV+KYE++ Y+ A HA +L L +SKK + +LF + +NE+E LRLRT+ HEMIIA H FT+ V+QQ Sbjct: 5 LNEVEEVIKQLKSKPGFSSYILMNNDGIVVKYENLAYKEATMHAYHVLSLYGRSKKHIHKLFPDSNENEIEWLRLRTKMHEMIIAQHLKFTIVVLQQ 101
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A8K1CSV7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSV7_PYTOL) HSP 1 Score: 108 bits (269), Expect = 8.130e-25 Identity = 51/96 (53.12%), Postives = 78/96 (81.25%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 NE+EE+IK LK+ PGFS+Y++MNNDGI++K+E++EY+ AV HA +L L ++KK +++LF +P ++E++ LRLRT+ HEM+I+ H FTL VIQ+ Sbjct: 7 NEIEEMIKQLKSKPGFSSYILMNNDGIIVKHENIEYKEAVMHAYHVLSLFGRTKKHIQKLFPDPNESELDWLRLRTKLHEMLISQHLRFTLVVIQK 102
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A5D6XEV9_9STRA (Robl_LC7 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XEV9_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.130e-24 Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQDPSAK 312 NE++E IK LK PGFSAYV+M+NDGIV+KYE++EY+ AV HA +L L ++KK + +LF E + E+E LRLRT+ HEMII H FTL +QQ A+ Sbjct: 7 NEIDEAIKQLKAKPGFSAYVLMSNDGIVVKYENLEYKEAVMHAYHVLTLYGRTKKHLHKLFPESGEGEIEWLRLRTKLHEMIITQHLRFTLVALQQPELAE 107
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A3R7JBZ8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JBZ8_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.620e-24 Identity = 57/96 (59.38%), Postives = 77/96 (80.21%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 NEVEEVIK LK+ GFS+Y++MNNDGIV+KYE++EY+ A+ HA +L L ++KK +++LF +P D+E+E LRLRT+ HEMIIA H FTL V+QQ Sbjct: 7 NEVEEVIKQLKSKSGFSSYILMNNDGIVVKYENVEYKEAIMHAYHVLSLYGRTKKHLQKLFPDPSDSEIEWLRLRTKMHEMIIAQHLRFTLVVLQQ 102
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Match: A0A2D4CFD4_PYTIN (Calmodulin n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFD4_PYTIN) HSP 1 Score: 114 bits (286), Expect = 8.810e-24 Identity = 56/96 (58.33%), Postives = 76/96 (79.17%), Query Frame = 1 Query: 13 NEVEEVIKDLKTNPGFSAYVIMNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELF-EPPDNEVESLRLRTREHEMIIALHDNFTLAVIQQ 297 NE+EEVIK LK+ PGFS+Y++MNNDGIV+K+E++EYR AV HA +L L +++K + +LF +P D E+E LRLRT+ HEMIIA H FTL V+Q+ Sbjct: 769 NEIEEVIKQLKSKPGFSSYILMNNDGIVVKHENIEYRDAVMHAYXVLSLFGRTRKHIHKLFPDPSDGEIEWLRLRTKLHEMIIAQHLRFTLVVLQK 864 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig990.21207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig990.21207.1 >prot_F-serratus_M_contig990.21207.1 ID=prot_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=polypeptide|length=100bp MNNDGIVIKYESMEYRTAVHHAALILDLASKSKKFMRELFEPPDNEVESLback to top mRNA from alignment at F-serratus_M_contig990:113174..115339- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig990.21207.1 ID=mRNA_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=mRNA|length=2166bp|location=Sequence derived from alignment at F-serratus_M_contig990:113174..115339- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig990:113174..115339- >mRNA_F-serratus_M_contig990.21207.1 ID=mRNA_F-serratus_M_contig990.21207.1|Name=mRNA_F-serratus_M_contig990.21207.1|organism=Fucus serratus male|type=CDS|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig990:113174..115339- (Fucus serratus male)back to top |