mRNA_F-serratus_M_contig99.21203.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig99.21203.1
Unique NamemRNA_F-serratus_M_contig99.21203.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A5BXV5_VITVI (JmjC domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=A5BXV5_VITVI)

HSP 1 Score: 401 bits (1030), Expect = 9.130e-128
Identity = 208/424 (49.06%), Postives = 275/424 (64.86%), Query Frame = 1 
Query:   22 HPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRP 1284
            H YGV+PLGN++   SS + R  GLG L IL DE +L+++G++D + LG LA VS++ YV+ + + LW+ LV+  +      G    G WK+T       + A  G       + L V  F+SD LFQ + CA   ++ EW+ R+ + RR GIS  DF   +EEPNRPV+L     +W ALEKW R+ L+    D++   G +E+ L+DY RY++  ++E PLY+FD KF +K P LG +YDVP  F EDL SVLG+E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKW+LFPP   PPGVHPS DG ++A PVS++EWF+NFY       +K  P+ECV  AGEV+FVP GWWH VINLE S+AITQNFVSR NL NV+ FL       L+SG     R++L E+F  A+ A  P
Sbjct:   61 HKYGVQPLGNLYFSPSSFNSRNSGLGALQILTDELVLEILGFLDGAHLGVLATVSKSFYVFTNHEPLWRNLVLDNL----VGGFLYNGSWKSTYVAAFYPSFACAGS------LVLNVRDFYSDYLFQSWLCANLEMKSEWLERDNITRRKGISIEDFVLNFEEPNRPVLLEGCLDNWVALEKWNRNYLIETCGDVKFSVGPVEMKLEDYFRYSDLVREERPLYLFDPKFGEKVPKLGLEYDVPVYFKEDLFSVLGNE-RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPEVVPPGVHPSPDGAEVACPVSIVEWFMNFYGATKKWKKK--PIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLDFLKKPNASMLVSGTR--DRVNLYEKFRKAIEATFP 469
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BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A1S4DJP0_TOBAC (F-box protein At5g06550-like n=5 Tax=Nicotiana TaxID=4085 RepID=A0A1S4DJP0_TOBAC)

HSP 1 Score: 401 bits (1030), Expect = 1.040e-127
Identity = 204/422 (48.34%), Postives = 280/422 (66.35%), Query Frame = 1 
Query:   28 YGVEPLGNIFLRRS-SDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLTKKH--LISGLPPDQRLDLGERFVSALTAKRP 1284
            YGV+PLGN++   S  + R  GLG L  L DE +LD++G ++ + LG L+ VS+  Y++ + + LW+ LV++        G   +G WK+T        S     P +S+   LKV  F+SD LFQ + CA   ++PEW+ ++ + RR GIS  +F   +EEPN+PV+L    +SWPALEKW R  L  E  D++   G +E+ L+DY  Y++++++E PLY+FD KF +K P LG+DYDVP  F EDL SVLG+E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKW+LFPP   PPGVHPS DG ++A+PVS++EWF+NFY    +  ++  P+ECV  AGEV+FVP GWWH VINLE S+AITQNFVSR NL NV+ FL       L+SG     R++L ++F +A+ A  P
Sbjct:   67 YGVQPLGNLYFNPSYHNSRNTGLGNLQTLTDELVLDILGLLEGTHLGILSNVSKGFYIFCNHEPLWRNLVLETC----KGGFFFKGSWKSTFVSAYKQPSF----PVLSSG--LKVRDFYSDYLFQSWLCANLEMKPEWLEKDNIVRRRGISVDEFVMNFEEPNKPVLLEGCLESWPALEKWNRDYLAEECGDVKFSVGPVEMKLEDYFSYSDQAREEKPLYLFDPKFAEKVPQLGKDYDVPMYFNEDLFSVLGNE-RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVHPSPDGAEVASPVSIIEWFMNFYNATKNWKKR--PIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKKPNACTLVSGT--SDRVNLHDKFKNAIEAYLP 473
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BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: Q2R2A5_ORYSJ (Os11g0572800 protein n=13 Tax=Oryza TaxID=4527 RepID=Q2R2A5_ORYSJ)

HSP 1 Score: 401 bits (1030), Expect = 1.420e-127
Identity = 209/425 (49.18%), Postives = 273/425 (64.24%), Query Frame = 1 
Query:   34 VEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVP---LKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRPDL 1290
            V+PLGN+ L     + R  GLG L  L D+ +LD++G +    L RL+  SRA YV A  D LW+ALV+ E+    G      G W+ T  YI    +AA G      H+P   L++ GF+SD LFQ + CA   +RPEW+ R+T+DRR G+S   F   +EEPNRPV+L    +SWPAL+KWTR  LL          G + + L  YL+YA+  ++E PLY+FD KF +K P +G+DY+VP  F EDL  VLG E+RPDHRW+I GPA SGSSFHVDPN TSAWNA + G KKW++FPP   PPGVHPS DG ++ +PVS+MEWF+NFY  C    ++  P+EC+  AGEVVFVP GWWH VINLE S+AITQN+VSR NL NV+ FL       L+SG     R++L ++F +A+    P +
Sbjct:   78 VQPLGNLLLLGGGGNLRDAGLGALRPLPDDVLLDVLGLLAARDLARLSAASRALYVVASHDPLWRALVLDEL----GGDFAFSGSWRAT--YI----AAASGGRA---HLPPRGLEIRGFYSDYLFQSWLCANMEMRPEWLHRDTIDRRRGMSVEQFVSEFEEPNRPVLLEGCLESWPALQKWTREHLLKVSAGKEFAVGPVSMTLDRYLQYADNVQEERPLYLFDAKFTEKVPEMGRDYEVPAYFREDLFGVLG-EERPDHRWVIIGPAGSGSSFHVDPNSTSAWNAVIKGAKKWVMFPPEVVPPGVHPSADGAEVTSPVSIMEWFMNFYGACKTWEKR--PVECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNASELVSGTT--DRVNLHDKFRNAIDMTYPGM 484
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BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A4D6MNE9_VIGUN (F-box and leucine-rich repeat protein 10/11 n=6 Tax=Phaseoleae TaxID=163735 RepID=A0A4D6MNE9_VIGUN)

HSP 1 Score: 400 bits (1029), Expect = 1.770e-127
Identity = 210/428 (49.07%), Postives = 280/428 (65.42%), Query Frame = 1 
Query:   22 HPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHV----PLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRP 1284
            H +GV+PLGN++L  SS + R  GLG L IL DE +LD++G++D SSLG L+ VS++ YV+ + + LWK LV++        G Q +G WK+T  Y+    SA    P  +N        KV  F+SD LFQ + CA   ++PEW+ R+ V R+ GIS  +F   +EEPNRPV+L     +W AL  W R  L+    D++   G +E+ L DY  Y+++ ++E PLY+FD KF +K P LG +Y+VP  F EDL  VLG+E RPD+RW+I GPA SGSSFHVDPN TSAWNA + G KKWILFPP   PPGVHPS DG D+A+PVS++EWF+NFY    +  +K  P+ECV  AGEV+FVP GWWH VINLE S+AITQN+VSR NL  V+ FL       L+SG     R++L ++F +A+ A  P
Sbjct:   69 HTHGVQPLGNLYLNPSSVNSRDTGLGNLHILSDELVLDMLGFLDASSLGVLSAVSKSFYVFTNHEPLWKNLVLENFL----SGFQYKGSWKST--YV----SACY--PSFANSAIALRGFKVRDFYSDYLFQSWLCANLEMKPEWLERDNVVRKRGISVEEFVLNFEEPNRPVLLEGCIDNWSALGNWDRDYLVRLSGDVKFSVGPVEMKLGDYFGYSDQVREERPLYLFDPKFAEKVPKLGDEYEVPVYFREDLFGVLGNE-RPDYRWIIIGPAGSGSSFHVDPNSTSAWNAVIKGSKKWILFPPDVIPPGVHPSPDGADVASPVSIIEWFMNFYGATKNWKKK--PIECVCKAGEVIFVPSGWWHLVINLEESIAITQNYVSRRNLVKVLDFLKRPNASTLVSGTR--DRVNLYDKFKNAIEASFP 479
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BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A1Y1I8P8_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8P8_KLENI)

HSP 1 Score: 404 bits (1037), Expect = 1.950e-127
Identity = 218/485 (44.95%), Postives = 291/485 (60.00%), Query Frame = 1 
Query:    1 SKQIDRG-HPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTT-LRYILGGTSAADGDPRVSN-------------------------------------HVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRPD----LGAEEMARRA 1317
            S +++ G HPYGV P+GN++  ++  + R  GLG+L  L DE++LD++G +D   L R+A VS++ YV+AH D+LW+AL +QE     G       GWK T + ++L  T  A+ +P  S+                                     H PL+VSGF+SD LFQ + CA+ +++ EW+ R+TV RR  +S   F   +E PNRPV++TD  K WPA +KW R  LL    D +   G +E  L +Y  Y + +++E PLY+FD KF +K P L  DY+VP+ F EDL  +LGD+ RPD RWLI GPARSGSS+H+DPN TSAWNA + G KKWIL+PP  TPPGV PS DG D+ APVS+ EWF+NFY+E    G  + PLEC+  AGEV+FVP GWWH VINLE SVA+TQN+VSR N+   + FL     K L+SG     R  L   F +A   K P     L AE  A +A
Sbjct:   79 SYELENGSHPYGVRPMGNMYFEKAEVNVRDAGLGELCNLSDEQVLDILGRLDSKDLSRVAQVSKSLYVFAHHDELWRALTLQEF---SGGFSYAPEGWKQTFVTHLLNAT--ANPNPNTSSRPQLHSLQQDPPANGARQSGKEERSLQASALGTAIAVHKPLQVSGFYSDYLFQSWLCASISVKQEWLERSTVPRRSNLSLQQFIDDFERPNRPVIITDVVKEWPAFQKWDREYLLKAVGDEKFACGPVEFTLDEYHAYGDWAREERPLYLFDSKFGEKVPQLVADYEVPEYFREDLFGLLGDK-RPDFRWLIIGPARSGSSWHIDPNSTSAWNAVIRGSKKWILYPPNMTPPGVRPSADGADVVAPVSIAEWFMNFYDETRQ-GDAMRPLECICRAGEVLFVPRGWWHTVINLEESVAVTQNYVSRRNILETLSFLARPNAKDLVSGTR--DRESLHGAFKAAFENKFPGELERLEAEAAAEKA 554
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A5BXV5_VITVI9.130e-12849.06JmjC domain-containing protein n=2 Tax=Vitis TaxID... [more]
A0A1S4DJP0_TOBAC1.040e-12748.34F-box protein At5g06550-like n=5 Tax=Nicotiana Tax... [more]
Q2R2A5_ORYSJ1.420e-12749.18Os11g0572800 protein n=13 Tax=Oryza TaxID=4527 Rep... [more]
A0A4D6MNE9_VIGUN1.770e-12749.07F-box and leucine-rich repeat protein 10/11 n=6 Ta... [more]
A0A1Y1I8P8_KLENI1.950e-12744.95Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:851473..858222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score676.8
Seed ortholog evalue7.5e-192
Seed eggNOG ortholog2880.D8LEI9
KEGG koko:K11323
Hectar predicted targeting categoryother localisation
GOsGO:0000976,GO:0000987,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008213,GO:0009987,GO:0010029,GO:0010030,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0018193,GO:0018195,GO:0018216,GO:0019538,GO:0032259,GO:0034969,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043565,GO:0043985,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048518,GO:0048580,GO:0048582,GO:0050789,GO:0050793,GO:0051094,GO:0051239,GO:0051240,GO:0051276,GO:0065007,GO:0071704,GO:0071840,GO:0097159,GO:1900140,GO:1901363,GO:1901564,GO:1990837,GO:2000026
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Ec32 ortholog descriptionJumonji and F-box domain protein
Ec32 orthologEc-21_004490.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons9
Model size2454
Cds size1446
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932785.356319-UTR-F-serratus_M_contig99:851472..8523571622932785.356319-UTR-F-serratus_M_contig99:851472..852357Fucus serratus maleUTRF-serratus_M_contig99 851473..852357 -
1690964474.366654-UTR-F-serratus_M_contig99:851472..8523571690964474.366654-UTR-F-serratus_M_contig99:851472..852357Fucus serratus maleUTRF-serratus_M_contig99 851473..852357 -
1622932785.5352454-UTR-F-serratus_M_contig99:857547..8575561622932785.5352454-UTR-F-serratus_M_contig99:857547..857556Fucus serratus maleUTRF-serratus_M_contig99 857548..857556 -
1690964474.476423-UTR-F-serratus_M_contig99:857547..8575561690964474.476423-UTR-F-serratus_M_contig99:857547..857556Fucus serratus maleUTRF-serratus_M_contig99 857548..857556 -
1622932785.5574353-UTR-F-serratus_M_contig99:858108..8582221622932785.5574353-UTR-F-serratus_M_contig99:858108..858222Fucus serratus maleUTRF-serratus_M_contig99 858109..858222 -
1690964474.493503-UTR-F-serratus_M_contig99:858108..8582221690964474.493503-UTR-F-serratus_M_contig99:858108..858222Fucus serratus maleUTRF-serratus_M_contig99 858109..858222 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932785.3799372-CDS-F-serratus_M_contig99:852357..8527421622932785.3799372-CDS-F-serratus_M_contig99:852357..852742Fucus serratus maleCDSF-serratus_M_contig99 852358..852742 -
1690964474.3807971-CDS-F-serratus_M_contig99:852357..8527421690964474.3807971-CDS-F-serratus_M_contig99:852357..852742Fucus serratus maleCDSF-serratus_M_contig99 852358..852742 -
1622932785.3969917-CDS-F-serratus_M_contig99:853109..8532761622932785.3969917-CDS-F-serratus_M_contig99:853109..853276Fucus serratus maleCDSF-serratus_M_contig99 853110..853276 -
1690964474.3915884-CDS-F-serratus_M_contig99:853109..8532761690964474.3915884-CDS-F-serratus_M_contig99:853109..853276Fucus serratus maleCDSF-serratus_M_contig99 853110..853276 -
1622932785.4157157-CDS-F-serratus_M_contig99:853781..8540361622932785.4157157-CDS-F-serratus_M_contig99:853781..854036Fucus serratus maleCDSF-serratus_M_contig99 853782..854036 -
1690964474.400303-CDS-F-serratus_M_contig99:853781..8540361690964474.400303-CDS-F-serratus_M_contig99:853781..854036Fucus serratus maleCDSF-serratus_M_contig99 853782..854036 -
1622932785.4350197-CDS-F-serratus_M_contig99:854825..8549451622932785.4350197-CDS-F-serratus_M_contig99:854825..854945Fucus serratus maleCDSF-serratus_M_contig99 854826..854945 -
1690964474.4102561-CDS-F-serratus_M_contig99:854825..8549451690964474.4102561-CDS-F-serratus_M_contig99:854825..854945Fucus serratus maleCDSF-serratus_M_contig99 854826..854945 -
1622932785.4582736-CDS-F-serratus_M_contig99:855197..8552911622932785.4582736-CDS-F-serratus_M_contig99:855197..855291Fucus serratus maleCDSF-serratus_M_contig99 855198..855291 -
1690964474.4231098-CDS-F-serratus_M_contig99:855197..8552911690964474.4231098-CDS-F-serratus_M_contig99:855197..855291Fucus serratus maleCDSF-serratus_M_contig99 855198..855291 -
1622932785.477339-CDS-F-serratus_M_contig99:855766..8559451622932785.477339-CDS-F-serratus_M_contig99:855766..855945Fucus serratus maleCDSF-serratus_M_contig99 855767..855945 -
1690964474.4338226-CDS-F-serratus_M_contig99:855766..8559451690964474.4338226-CDS-F-serratus_M_contig99:855766..855945Fucus serratus maleCDSF-serratus_M_contig99 855767..855945 -
1622932785.492105-CDS-F-serratus_M_contig99:856648..8567771622932785.492105-CDS-F-serratus_M_contig99:856648..856777Fucus serratus maleCDSF-serratus_M_contig99 856649..856777 -
1690964474.4530032-CDS-F-serratus_M_contig99:856648..8567771690964474.4530032-CDS-F-serratus_M_contig99:856648..856777Fucus serratus maleCDSF-serratus_M_contig99 856649..856777 -
1622932785.51263-CDS-F-serratus_M_contig99:857430..8575471622932785.51263-CDS-F-serratus_M_contig99:857430..857547Fucus serratus maleCDSF-serratus_M_contig99 857431..857547 -
1690964474.465856-CDS-F-serratus_M_contig99:857430..8575471690964474.465856-CDS-F-serratus_M_contig99:857430..857547Fucus serratus maleCDSF-serratus_M_contig99 857431..857547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21203.1prot_F-serratus_M_contig99.21203.1Fucus serratus malepolypeptideF-serratus_M_contig99 852358..857547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig99.21203.1

>prot_F-serratus_M_contig99.21203.1 ID=prot_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=polypeptide|length=482bp
MLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQ
TRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATA
ALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWT
RSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCP
ALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTS
AWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEEC
HDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLP
NVIRFLLTKKHLISGLPPDQRLDLGERFVSALTAKRPDLGAEEMARRALL
VAVDGRNQSNRRGLKNTAVHRREDDVNKKPRLWAKLKQGAAAVEPSTDDG
SNGEGRAAGGERSKTGVEGSGSNDFSFGFSF*
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mRNA from alignment at F-serratus_M_contig99:851473..858222-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig99.21203.1 ID=mRNA_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=mRNA|length=6750bp|location=Sequence derived from alignment at F-serratus_M_contig99:851473..858222- (Fucus serratus male)
TCGAAACAGATCGATCGTGGCCACCCTTACGGTGTGGAGCCGCTGGGCAA
CATCTTCTTGAGGCGGAGTTCCGACTGCCGACCCGGGGGCCTAGGGAAGC
TTGCGATCCTGGACGTGAGCGAAGCCTGGTTTTTATTTTCTTTCGTTCCA
ACAGTAGTGTACGTTTTACGGAGCACGTTAAAGCTCTTATGCAAGAAGGA
GTGCGTCTTCTTGTGGCGAGGGAGGGCGGTTTTGTGAGTGTCTTACCGTT
GTGCTACCTATCTTAAAACGATATTTTCTTGGGAAGCATCGAGCCTCTCA
GGTGTGTGTCATATTTTATTATACTGCAGATTTATACTGCTGATCCGCCC
TACGTTAACGATTCATGAGCGGACGAACATACTTCTTTCCGGAGACTGGT
ACGGCGGCCATACTCTTGCCGGCGCCTAGATCCGCTCTCTCATGCGATGC
TGCGGGCGATGTGTAATTCGTATCGATCAGAAAGTACGCGTGGCAGATAT
ACTTACAGTTGAAGAGGGAAATTATAAGGTAGTTCTACTCCAAAGTACTG
TATAGTACCATACTGTGTAGTGTACATATACATACAGTGTGTGGTACTTT
TCCAGAAACGTTTTGGTAACCATTTATCTGTCTTGTATCGCCGTTCGCTT
CACCACCACTTGGTAGGATGAGAGAATGCTAGACTTGATGGGGTATATGG
ACTTGTCATCCCTCGGCCGCCTGGCGGTCGTGAGCCGCGCTACGTACGTG
TACGCTCACGTGGACGACCTGTGGAAAGCTCTCGTGGTGCAGGTAAAACG
CACGAGACGGTGCCGTACTGTGCTCTACTCCGACCCCCCCGCCTAGCTTG
ATTGCTGAGCTTAGTTCAATAACAAAGTATTCGGCATGAAGAAGATCTTC
TGCAAGGAAAATATATTTAGTCTAAATATATAACAACATATCTATTGTCT
CGTAATCAGTAGAAAGTTATCGTGGAGATCTCTCGCTTGAACGCTCCTAA
TATTTTCTGGGCGGGGTATCGTTGTTATGCTACTCTCTATTGATAGCGAA
ATAGTATGGAAACATAATCCACTTTTCTAGCAATAGACTTCAAATCGCAG
CCTGACCCTTTTTTCTGTGACGCCTCCTTGAAAGGTTTTTGTAGGTATTT
GTATCAGTTTTATCTTGATCCTTTTATGATTGAAATCAAAATAATTTTTC
CGCTCCGGTCACATCATCAAACTACTCGTGGCTGCTGAGAGAATTGATGG
CAAGTCTTGATCCCCTCTTCGAAACCCTATCATAGATGCCGAAAATCCAT
GAGACCGAATCTTTAGGTCTTGCATGTACAAAAAGCTACAAAATACAACA
ATGAAACAGAGGAGATTTGTTTTAACGGCGAGACATTTGGTGGAGTGAGA
CTGAACGTCCCACGCGTCTTGGGTTGTTTTCGACGGCTTCGTTAGGAGAT
GTGGCGACGGCCGGGACAGGGGGTGCAGACGCGTGGAGGCTGGAAAACCA
CCCTGCGGTACATCTTGGGAGGCACCTCTGCTGCGGACGGTGACCCCCGC
GTTTCGAATCACGTACCCTTGAAGGTATGGCAAGAGTATACAGTTCACAA
GAGTAGTGATTTTCAAACCACACGAGGGTCCGTTGTATTTGTGGAAAAGC
TCACACATGACGAGGCATGCCTGGAACATCAAGAGGTTTTGTATTTGCAG
CCTATGATCCCACCGAAACGTTTTGACATTTTCCCCCCCTGACTGGGGTA
TAGTATAGTATAGTATGCTTAGAAGGTCTAAATGCGTTCAGATTTTTCTT
TGAAGACACATCCGAAAGTACTACACTACTCGTGTATTGGTTAATATTTA
ATGTATTGTAGCGCTGGAAAAGCTCTACAAGTACTGCGCATTGGCCGCTT
TGCAAAAAACGCTCGAAACTCACTCTTCCGAATGGCGCGGTTGCTTGCGG
TGATATGGTGGTATTTAGGTTTTATTCGTGTGTCATGGCTATCCACCAGC
ACGAGTCCTTGCTAAACTCAGCAAGTGATGATGGGTGTGATTAAAATTAT
TACCGGTACAGTAATATTTCCTCCTCTCTCCCCCCCCTCCGCCCAACGAA
ATATGGAACATGAACTGCACACACAACTCTAGAGCTTCTATATACGTAGA
CGTGCATGGATGAGGCAATGCATATGAACAAATGCTCCGTCATCCACCAT
GCACCACCCGCACACATAACCACAACGTTAAGTTTCTGTTCTGGACTAAA
TTACACAGGCGACACCTTCCCCGCCAGGTGTCGGGATTTTTTTCGGATCT
TCTGTTCCAGCCGTACCATTGCGCCACCGCTGCCTTGAGACCCGAGTGGA
TCAGCCGTAACACGGTGGACAGGAGGGTAGGGATTTCTCCCTCGGACTTC
CGACGGCTCTACGAGGAGCCCAACAGACCCGTAGTCCTCACAGACGCCGC
AAAAAGGTACAAGTACTGCAATCAATTCGCAATGATAATGTACTGTGTAC
ATAATTTTCTACTGTACATTTCTATACGAACACGACCCTGTAGTACGCAG
ATCACGTCCTTGGTCGATGTGTGCGTGAAGTATGCTTGTCGTGGGCAGGC
CTGGCTTGAACATGTTTTCAGAAAGAGCATCTCGCCGCCGCTCGGAAACC
CTCCGTAGACCGCTGTTCCGCCGAGATTTCGGGAAAGAAAACAACTATTT
ATAGAACAAGCCTGGTGTCCTCTTTTTTCGTCTTGAGGAAGGGTTACTCA
CGTGAATAAAACGTGTGGAATCCTTGCGCATGGATTTGCGCTTGCTTACT
CCTCTAAAACCCGACCCCCCGTCTCGGAATCATAGCCGCGTGATGCACCT
TGCGTGTTACAACATTCATAGTCATCCGCGGAACGTCTGTTAACACCTGT
TCGTCGTTTTACCTCGTCGGCGCTCTCGCAGCTGGCCTGCCCTTGAAAAG
TGGACCCGAAGCAAGCTTCTGGCAGAGCACAGGGATCTCCGCCTGCATGC
CGGAGGCCTAGAGATCGCGCTGAAGGTGCTGTATAACCAACTGGCCTGTC
ATATACCAATGCTCGCAACGGTGCGCCAGTTGTTTGCCCGGCAGACTAAA
AAAAGAAACACACAACTCGTCGTTTCATTTATTCGTTCTTTCTGCCGACT
ACATCTCTGCCGACAGCAAGATCGTAAGGAACGATGCTGCTGCTGCTGCT
GCACCCGCTGTGCAGTGATTCGAGAACGGTTCCCCCTTGCCCCCCCCCCC
CCGCTCCCCCTTGTAATTCATCGGCAGGACTATCTCCGCTACGCCGAGGA
GTCGAAGGACGAGCTACCGCTTTACGTGTTCGACAAGAAATTTGTCGACA
AGTGCCCCGCCCTCGGCCAAGACTATGACGTCCCAGACGTCTTCCCGGTG
AGCCGTTCTTTCTGTATTGGGTGTAATAGCGCTCACTTGCTCTACTGTGT
GTGTGTGTCATGAAGCAGAGCGTGTCCGTTTATTGACCTCGTGGTCATCG
TCTGCGTGTCGTGTGGGTGTCAGGACGATCGCTTAGGCTGGATAGTTAAG
CCGTATCATCTCGTTTCTCTTCCCTCCTAACTTTAAAAGCCCTTTTTGCG
TGGTTATTATCACGCGACCAGCTCAGGAGGCAACGGGCGGACATACAACC
TTCGCCGGTCGTGTTGTTCGGCAAAGCATTTTTATCGGAACTTAGCGGTC
TCTCAGTCACAGGAGAAAGAAAAAGAAGAAACAAATGTTTTCTGCGTTAT
TCTTCATGAAAAGGCCACATTATTCCGCATCGTCCACACGGTAGCGACGC
CTCGCCGACGGCTGCGTAATTGTGTTTCGAAAGAGCGATCGAACGTGTTT
TACCCTTGCTTGCATCGACTTGAGCCGGCATCGTTCAAGTGTCGCAATTG
CCTCCAGTGCCACGCTCCCTGTAAGCTCTTTTTACTCAAGACAGCCCAGT
GCTGTACGGAAGCTCCTGTGTGTCTTCACATAACACAGAAGACGATTTAT
GCCGCTCTTTCCCTCGAAAATTGCCCCTCCCCGTCCTTATCCGTGGCGTC
ATACACCTTTACACCTCGCCATCTGGTTTGGGTTGACAGTTTGGATGAGT
ACTGAGTAGGGTTTACGGAACATACGGTAATAGATGTTGCGATAGGGCCG
TAACAACATCGCCTCCTCTTAAAACACGACTCTCAGGAGGACCTGCTTTC
CGTGCTTGGTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTC
CCGCTCGCTCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCC
TGGAACGCAACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGG
AGAAACGCCTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGG
CTCCCGTGTCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGTATCTGAA
CAAGATCGAGATTCGGTCCTGACGCGTTGATATGTACTTGTTGTATCACT
TAGGCTGCCAAGTATCGGTATTCTGTTTTGTGCCGCGATGCCATGTTGGT
TGTGTTTGGTGCAACCAGCAGTAGCATGCCGGGTTCCTTTTTTCCCCCAG
AGAGAGGTAAAGTTGGGGGTAGGGCTGAGCAGGGGTAGCATAGCGTTAAG
ATACTCATATCCCGAACTATTTTCGTTCAATCTCCATGAAGCACTAAGTG
CATGCATCGCCACGCTATAGCCCTAATATGAGCTCGTGCGCGAGGTACTT
TTCCAGAGAGGTGCCGTTGACGGAGTCTAACCAAAAGCAGCACGTGACAT
GATCATGATCAGGCCTTCTCTTACAGCAGAGGGGGAAAAGTGTAGCGTAT
GCAACTTTGAACCACCACTCTTTTCACTTGTCGATTGACTCTTTTGTCGT
CTCTTGCCACGGTGTGATCGTACCGTCGTACGGGGGATGGAGGCAGGAAT
GTCATGACCCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTTGTCTCTGCC
GGAGAGGTGGTGTTCGTGCCGATGGGATGGTGGCACTGCGTCATCAATCT
TGAGTGGTCCGTGGCAATCACGCAGAATTTCGTCAGCAGGGTCAATCTCC
CGAACGTCATCAGGTTCGTTCGGTGCTGTTCTCTACGTTCGTCGAGGGTG
GGGGGAGCCTGTTCTCAGTCGGTTTTGCTAAGCTCTTCCCGCCCCCCCAA
AATAAAAAGCACTAACACAACAAAGGACGCCGAATGACCAATTTTACCAC
TAACCGGAACCGAGTCAACGTTTCTTCCTGCCACACACTCCATCATCGAC
CTGGCCGGCGTCGACGCCTCCTCCTTGACGGCCTGGAGAAAGAACCTCAC
CATTATTCAGGCTGCTACCTAAACATACTTTTTCCTTCAACCGGGGGGTA
ATTAACCCTTTACCCCCCCCCTCCTCCCCCTGACCCGTTGCTGTCTGTCT
CGCGCGTGTGACCATAACGGTGCGTTCCAGGTTTTTGCTTACTAAAAAAC
ATCTCATATCCGGTCTGCCGCCCGACCAACGCTTAGATCTCGGAGAGAGA
TTCGTTTCTGCTTTGACCGCCAAGCGTCCTGACCTCGGCGCCGAGGAGAT
GGCGAGACGCGCTCTCCTGGTCGCCGTCGATGGGCGGAATCAGTCGAACC
GTCGAGGTTTGAAAAACACGGCAGTTCACCGCCGAGAGGATGATGTGAAT
AAAAAGCCGAGGCTGTGGGCGAAACTCAAGCAGGGAGCCGCGGCTGTCGA
GCCCTCCACGGATGATGGCAGCAACGGCGAGGGCAGGGCTGCTGGTGGAG
AGAGGAGCAAGACTGGGGTGGAGGGTTCAGGCAGCAATGATTTTAGTTTT
GGGTTCTCGTTCTAATAACCATTCTAGCGTTCAAACTGTACGTGACGGCG
GTGTACCAGGTAATATGACGACTCCCAGGGGATGGTTAATGGGTGTCCCC
GGTCTAATTGTTTCGCTGTCCTGCGCAGACACTATTTGTAAACTTGACGG
ATTTAACAACATTTGTGCAATTCAATGGGAAAAAACTAGCTTAGGGGATG
TTTGCTGTCCTTGTGGTCGAACGAAAAAGGTTGGGGGGGGCACCCCGGAG
TTATACATTTTATGCAATTTAATGCGTAACAGGATACTACTTTGAAGTAT
TTAGTCAACCGCATCACCTAAGGCATAAGACGAAATGCCGAACAAACGTA
TCTAGGTTGTATGTATGTATCTATGTGTGTATGGTCATCACTCATAGCAA
GATTATGGATCAACCGGGTAAGGTTGCCAATCCTACTCGTAGATGATGTT
TCCCTGTCCCCGTTCTTGCTGAGAATTTGGTCTCGCGAGACAGATTCAGC
GGTCCCGTGTGCCCCTGACTTAACTGTTAAAACTTCGGTATTGTCATCGG
TGCAAAAAACATCCGAACAGGACACCGGCTGTCGTGCTGTTTTGAACTTG
GAGGAAATACAATACTTCTATTAATAGTCAAGCACGAGGAGTTGCGGGCA
TTTCTAACGTGGAACTAACTCCCTCATTTCACACCGACGCGACTTTCTAC
AGTTTTTAGTCGTTTGAAACACCACGGTCCCTCGCCTTTTCCGCCCCCAG
CATGTGTCAAGTCGAAGGCACCTGATCGCAGAAGTGCAGTTGGCGAGACC
TAGGAGATCTCAAGTTGGGGTTTACAGTATCACATGCTGCTTGCGAAAAA
TTACCAGATATTTACTAAGGTTTTTCATAATCGAATTCCATTCGTACATA
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Coding sequence (CDS) from alignment at F-serratus_M_contig99:851473..858222-

>mRNA_F-serratus_M_contig99.21203.1 ID=mRNA_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=CDS|length=2892bp|location=Sequence derived from alignment at F-serratus_M_contig99:851473..858222- (Fucus serratus male)
ATGCTAGACTTGATGGGGTATATGGACTTGTCATCCCTCGGCCGCCTGGC
GGTCGTGAGCCGCGCTACGTACGTGTACGCTCACGTGGACGACCTGTGGA
AAGCTCTCGTGGTGCAGATGCTAGACTTGATGGGGTATATGGACTTGTCA
TCCCTCGGCCGCCTGGCGGTCGTGAGCCGCGCTACGTACGTGTACGCTCA
CGTGGACGACCTGTGGAAAGCTCTCGTGGTGCAGGAGATGTGGCGACGGC
CGGGACAGGGGGTGCAGACGCGTGGAGGCTGGAAAACCACCCTGCGGTAC
ATCTTGGGAGGCACCTCTGCTGCGGACGGTGACCCCCGCGTTTCGAATCA
CGTACCCTTGAAGGAGATGTGGCGACGGCCGGGACAGGGGGTGCAGACGC
GTGGAGGCTGGAAAACCACCCTGCGGTACATCTTGGGAGGCACCTCTGCT
GCGGACGGTGACCCCCGCGTTTCGAATCACGTACCCTTGAAGGTGTCGGG
ATTTTTTTCGGATCTTCTGTTCCAGCCGTACCATTGCGCCACCGCTGCCT
TGAGACCCGAGTGGATCAGCCGTAACACGGTGGACAGGAGGGTAGGGATT
TCTCCCTCGGACTTCCGACGGCTCTACGAGGAGCCCAACAGACCCGTAGT
CCTCACAGACGCCGCAAAAAGGTGTCGGGATTTTTTTCGGATCTTCTGTT
CCAGCCGTACCATTGCGCCACCGCTGCCTTGAGACCCGAGTGGATCAGCC
GTAACACGGTGGACAGGAGGGTAGGGATTTCTCCCTCGGACTTCCGACGG
CTCTACGAGGAGCCCAACAGACCCGTAGTCCTCACAGACGCCGCAAAAAG
CTGGCCTGCCCTTGAAAAGTGGACCCGAAGCAAGCTTCTGGCAGAGCACA
GGGATCTCCGCCTGCATGCCGGAGGCCTAGAGATCGCGCTGAAGCTGGCC
TGCCCTTGAAAAGTGGACCCGAAGCAAGCTTCTGGCAGAGCACAGGGATC
TCCGCCTGCATGCCGGAGGCCTAGAGATCGCGCTGAAGGACTATCTCCGC
TACGCCGAGGAGTCGAAGGACGAGCTACCGCTTTACGTGTTCGACAAGAA
ATTTGTCGACAAGTGCCCCGCCCTCGGCCAAGACTATGACGTCCCAGACG
TCTTCCCGGACTATCTCCGCTACGCCGAGGAGTCGAAGGACGAGCTACCG
CTTTACGTGTTCGACAAGAAATTTGTCGACAAGTGCCCCGCCCTCGGCCA
AGACTATGACGTCCCAGACGTCTTCCCGGAGGACCTGCTTTCCGTGCTTG
GTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTCCCGCTCGC
TCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCCTGGAACGC
AACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGGAGAAACGC
CTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGGCTCCCGTG
TCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGAGGACCTGCTTTCCGT
GCTTGGTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTCCCG
CTCGCTCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCCTGG
AACGCAACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGGAGA
AACGCCTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGGCTC
CCGTGTCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGAATGTCATGAC
CCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTTGTCTCTGCCGGAGAGGT
GGTGTTCGTGCCGATGGGATGGTGGCACTGCGTCATCAATCTTGAGTGGT
CCGTGGCAATCACGCAGAATTTCGTCAGCAGGGTCAATCTCCCGAACGTC
ATCAGGAATGTCATGACCCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTT
GTCTCTGCCGGAGAGGTGGTGTTCGTGCCGATGGGATGGTGGCACTGCGT
CATCAATCTTGAGTGGTCCGTGGCAATCACGCAGAATTTCGTCAGCAGGG
TCAATCTCCCGAACGTCATCAGGTTTTTGCTTACTAAAAAACATCTCATA
TCCGGTCTGCCGCCCGACCAACGCTTAGATCTCGGAGAGAGATTCGTTTC
TGCTTTGACCGCCAAGCGTCCTGACCTCGGCGCCGAGGAGATGGCGAGAC
GCGCTCTCCTGGTCGCCGTCGATGGGCGGAATCAGTCGAACCGTCGAGGT
TTGAAAAACACGGCAGTTCACCGCCGAGAGGATGATGTGAATAAAAAGCC
GAGGCTGTGGGCGAAACTCAAGCAGGGAGCCGCGGCTGTCGAGCCCTCCA
CGGATGATGGCAGCAACGGCGAGGGCAGGGCTGCTGGTGGAGAGAGGAGC
AAGACTGGGGTGGAGGGTTCAGGCAGCAATGATTTTAGTTTTGGGTTCTC
GTTCTAAGTTTTTGCTTACTAAAAAACATCTCATATCCGGTCTGCCGCCC
GACCAACGCTTAGATCTCGGAGAGAGATTCGTTTCTGCTTTGACCGCCAA
GCGTCCTGACCTCGGCGCCGAGGAGATGGCGAGACGCGCTCTCCTGGTCG
CCGTCGATGGGCGGAATCAGTCGAACCGTCGAGGTTTGAAAAACACGGCA
GTTCACCGCCGAGAGGATGATGTGAATAAAAAGCCGAGGCTGTGGGCGAA
ACTCAAGCAGGGAGCCGCGGCTGTCGAGCCCTCCACGGATGATGGCAGCA
ACGGCGAGGGCAGGGCTGCTGGTGGAGAGAGGAGCAAGACTGGGGTGGAG
GGTTCAGGCAGCAATGATTTTAGTTTTGGGTTCTCGTTCTAA
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