mRNA_F-serratus_M_contig99.21203.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig99.21203.1
Unique NamemRNA_F-serratus_M_contig99.21203.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A250XF21_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XF21_9CHLO)

HSP 1 Score: 404 bits (1037), Expect = 9.430e-129
Identity = 211/463 (45.57%), Postives = 282/463 (60.91%), Query Frame = 1
Query:   22 HPYGVEPLGNIFLRRSSDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEM-----WRRPGQGVQTRGGWKTTL---RYILGGTSAADGDPRVS----------------------NHV-PLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLT-KKHLISGLPPDQRLDLGERFVSALTAKRPDLGAEEMARR 1314
            HP G++PLGN  + ++   R   LG L+ L DE +L+++      SL  L+  S+A Y +A  +DLW+ALV++E      W     G      + T L   +   GG  A  G+                          +HV PL+V G +SDLL+QP+ CAT  L  EW+S + +DRR G++ S+F   YE PNRPVV+T A   WPAL+KW+   L    +   + AG  E+    YL+Y + + DE+PLY FDK F  K P L  D+ VP+ F +DL SVLG+E RPD+RW+I GP+RSGSSFHVDPNCTSAWNA ++G+KKWIL+PP   PPGVH S D  D+A P+SL+EWF+NFYEE      KV P+ECVVS GE++FVP GWWH  INLE  +AITQNFVSR NLP+V+ +L   +  L+SG     R  L +RFV+AL  + P++  E  A+R
Sbjct:    6 HPRGIQPLGNSLVSQAPSVRDASLGNLSKLSDELLLEVLALCPHDSLLSLSASSKALYAFATHEDLWRALVLEEFEGHFSWASTWMGTY----FLTKLGPRKICSGGNIARVGNAEARRASVKRKRPGLQDSSAIIHDTPHHVRPLQVQGVYSDLLYQPWLCATIQLSEEWLSTDNIDRRRGMTVSEFVNQYERPNRPVVITGAISKWPALKKWSLPYLSKVFQGKTIVAGNYEMPFDTYLKYWDSNHDEMPLYFFDKTFCIKAPQLQNDFSVPEYFSDDLFSVLGEEGRPDYRWMIMGPSRSGSSFHVDPNCTSAWNAVITGRKKWILYPPHVEPPGVHASPDRADVATPLSLVEWFMNFYEEAQV--GKVKPIECVVSPGELIFVPRGWWHMAINLEPGIAITQNFVSRTNLPHVLSYLKPGRSDLVSGCALHDRASLHDRFVAALAERCPEVLKELEAKR 462          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A2G2VVE0_CAPBA (JmjC domain-containing protein n=5 Tax=Capsicum TaxID=4071 RepID=A0A2G2VVE0_CAPBA)

HSP 1 Score: 403 bits (1035), Expect = 1.090e-128
Identity = 201/422 (47.63%), Postives = 279/422 (66.11%), Query Frame = 1
Query:   28 YGVEPLGNIFLRRS-SDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLTKKH--LISGLPPDQRLDLGERFVSALTAKRP 1284
            +GV+PLGN+++     + R  GLG L  L DE +LD++G ++ + LG L+ VS++ Y++ + + LW+ LV++        G+  +G WK+T   +   T              +K+  F+SD LFQ + CA   ++ EW+ R+ V RR G+S  +F   +EEPN+PV+L    ++WPALEKW R  L+ +  D+R   G +E+ L+DY RYA++ ++E PLY+FD KF +K P LG+D+DVP  F EDL SVLG+E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKWILFPP   PPGVHPS DG ++A+PVS+MEWF+NFY    +  ++  P+ECV  AGEV+FVP GWWH VINLE S+AITQNFVSR NL NV+ FL       L+SG     R++L ++F SA+ A  P
Sbjct:   56 HGVQPLGNLYINPPFHNSRNTGLGNLQTLTDELVLDILGLLEGTHLGILSTVSKSFYIFCNHEPLWRNLVLETC----KGGLFFKGSWKSTFVGVCNRTCG------------VKIRDFYSDYLFQSWLCANLEMKSEWLERDNVVRRKGVSVDEFVMNFEEPNKPVLLEGCLENWPALEKWNREYLIEKCGDVRFSVGPVEMKLEDYFRYADQVREERPLYLFDPKFAEKVPQLGKDFDVPIFFNEDLFSVLGNE-RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWILFPPDVVPPGVHPSPDGAEVASPVSIMEWFMNFYNATKNLKKR--PIECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVLEFLKRPNACTLVSGT--SDRVNLHDKFKSAIEAYLP 456          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A7J7NS40_9MAGN (JmjC domain-containing protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NS40_9MAGN)

HSP 1 Score: 403 bits (1035), Expect = 1.200e-128
Identity = 204/432 (47.22%), Postives = 284/432 (65.74%), Query Frame = 1
Query:    4 KQIDRGHPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLTKK--HLISGLPPDQRLDLGERFVSALTAKRPDL 1290
            K     H +GV+PLGN+FL  +S + R  GLG L    DE ++D++G++  + LG LA VS++ YV+++ + LW+ LV++ +      G    G WK+T  Y+   ++   G P   +   LKV  F+SD LFQ + CA+  ++PEW+ R+ + RR  +S  +F   YEE N+PV+L    +SW ALEKW +  L+    D+    G +E+ L+DY RY++ +++E PLY+FD KF +K P LG DY+VP  F EDL +VLG+E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKW+LFPP   PPGVHPS DG ++A PVS++EWF+NFY    D  ++  P+ECV  AGEV+FVP GWWH VINLE S+AITQN+VSR NL NV+ FL       L+SG   + R++L E+F SA+ A  P +
Sbjct:   44 KPSTSSHSHGVQPLGNLFLSSTSYNSRNNGLGNLCNFSDELVIDILGFLSGAHLGVLATVSKSLYVFSNHEPLWRNLVLENL----KGGFLFNGSWKST--YV---SACNTGFPVSLSKSSLKVRDFYSDYLFQSWLCASLEMKPEWLERDNIVRRRDVSVEEFVGSYEELNKPVLLEGCLESWGALEKWDKDYLIKICGDVAFSVGPVEMKLEDYFRYSDGAREERPLYLFDPKFAEKVPELGSDYEVPVYFREDLFAVLGNE-RPDYRWVIMGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVAPPGVHPSPDGAEVACPVSIIEWFMNFYGATKDWKKR--PVECVCKAGEVIFVPNGWWHLVINLEESIAITQNYVSRRNLLNVMEFLKRPNAMELVSGT--EDRVNLYEKFRSAIEASLPGI 461          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A484KAP0_9ASTE (JmjC domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484KAP0_9ASTE)

HSP 1 Score: 403 bits (1036), Expect = 1.330e-128
Identity = 211/426 (49.53%), Postives = 283/426 (66.43%), Query Frame = 1
Query:   22 HPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRPDL 1290
            H +GV+PLGN++   SS + R  GLG L IL DE +LD++G ++ + LG L+ VS+A YV  + + LW+ LV++        G      WK T  YI G   + +    +S+   L+V  F+SD LFQ + CA   ++PEWI R+T+ RR  IS  +F   +EEPNRPV+L      W A +KW R  L+    D++   G +E+ L+DY RY++++K+E  LY+FD KF +K P LG DYDVP+ F EDL SVLG E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKW+LFPP   PPGVHPS DG ++A+PVS+MEWF+NFY E  +  +K  P+ECV +AGEV+FVP GWWH VINLE S+AITQNFVS  NL NV+ FL     + L+SG   D R++L ++F +A+ A RP L
Sbjct:   62 HSHGVQPLGNLYFSSSSHNSRNSGLGNLQILTDELVLDILGLLEGTHLGVLSTVSKAFYVLCNHEPLWRNLVLEGC----KDGFFYNKSWKCT--YINGFNPSFN---FLSSG--LRVRDFYSDYLFQSWLCANLEMKPEWIERDTILRRKNISVDEFVLNFEEPNRPVLLEGCLDKWVAFKKWDRDCLVEMCGDVKFAVGPVEMKLEDYFRYSDQAKEERLLYLFDPKFAEKVPQLGLDYDVPEYFNEDLFSVLGKE-RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPPGVHPSPDGAEVASPVSIMEWFMNFYAETRNWKKK--PIECVCNAGEVIFVPNGWWHLVINLEDSIAITQNFVSSRNLLNVLDFLRRPNARSLVSGT--DDRVNLHDKFKNAIEASRPGL 471          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A103XH09_CYNCS (F-box domain, cyclin-like protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XH09_CYNCS)

HSP 1 Score: 403 bits (1035), Expect = 1.360e-128
Identity = 207/422 (49.05%), Postives = 274/422 (64.93%), Query Frame = 1
Query:   28 YGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRP 1284
            YGV+PLGN +   S  + R  GLG +  L DE +LD++G++  + LG L+ VS++ YV+ + + LW+ LV++      G G   +  WK+T  Y+   T     D      + LKV  F+SD LFQ + CA   ++ EW+ R+ V RR GIS  +F   +EEPN+PV+L     +WPALEKW R  L+    D R   G +++ L DY RY++++++E PLY+FD KF DK P L QDY+VP  F EDL SVLG E+RPD+RW+I GPA SGSSFH+DPN TSAWNA V G KKW+LFPP   PPGVHPS DG ++A PVS+ EWF+NFYE      +K  P+ECV  AGEV+FVP GWWH VINLE S+AITQNFVSR NL NV+ FL       L+SG     R++L ++F +A+ A  P
Sbjct:   55 YGVQPLGNFYFSSSPHNSRNTGLGNIQTLTDELVLDILGFLSGTDLGILSTVSKSFYVFCNHEPLWRNLVLENC----GDGFLFKRSWKST--YVA--TYQPSFDVSKVGSLGLKVKDFYSDYLFQSWLCANLEMKHEWLDRDNVIRRKGISLDEFISNFEEPNKPVLLEGCLDNWPALEKWDRDYLVKVCGDARFSVGPVQMKLDDYFRYSDQAQEERPLYLFDPKFADKVPKLDQDYEVPLYFNEDLFSVLG-EERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVVKGSKKWVLFPPDVVPPGVHPSSDGAEVACPVSITEWFMNFYESTKTWKKK--PVECVCKAGEVIFVPNGWWHLVINLEDSIAITQNFVSRRNLLNVMEFLKRPNASSLVSGTR--DRVNLHDKFRNAIEASYP 463          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: W2QKN7_PHYPN (JmjC domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QKN7_PHYPN)

HSP 1 Score: 404 bits (1037), Expect = 1.620e-128
Identity = 193/439 (43.96%), Postives = 277/439 (63.10%), Query Frame = 1
Query:    1 SKQIDRGHPYGVEPLGNIF---LRRSSDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTT-LRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVG--ISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLTKKHLISGLPPDQRLDLGERFVSALTAKRPDLGAE 1299
            S ++   HP GV+P+GN F   ++   +CR  GLG+LA++ D ++L L+ Y     L  LA  SRA YVY   D+LW+ LV++EM    GQ  + +  WK T LR   G         +V    P++V G +SDLLFQ ++C+ A +   W++   ++RR    ++  DF+R +E PN+PV++TDA  +WPA+ KWT   L    +    +AGG + ++  Y  Y     D+ PL+VFDK+F  K P L +DY VP+ F ED  ++LG+E+RPD+RWLI GP +SGSSFH+DPN T+AWN  + G KKWI+FPPG+ PPG+HPSEDG ++++PVSLMEWF+ FY++       + PLE +   GE +FVP GWWH V+N++ SVA+TQNFVS  N+ +V+ FL  K   +SG P +QR  LG  F   L +  P+L A+
Sbjct:   45 SPRVRLEHPLGVKPIGNYFEDSVKGIKECRASGLGRLAMMQDSQLLSLLNYCSAVDLANLAACSRAAYVYGTHDELWRVLVLEEM---EGQ-FEPKPTWKATYLRTRYG--------DKVQLEAPIRVQGVYSDLLFQSFYCSAAPIEEAWLAVENIERRSAKDMTVEDFKRDFECPNKPVIITDAIDNWPAINKWTDEYLDEVCKGKTFYAGGFQFSMDKYFNYCRTLLDDQPLFVFDKEFAAKVPQLAKDYTVPEYFQEDYFALLGEEKRPDYRWLIIGPKKSGSSFHIDPNATNAWNGVIRGSKKWIMFPPGQVPPGIHPSEDGSEVSSPVSLMEWFVTFYKDVQKLPAHLKPLEGICREGETMFVPHGWWHTVLNIDESVAMTQNFVSSSNVKSVLEFLTDKPEQVSGCPMEQRPKLGGMFREVLVSNVPELYAK 471          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A2U1QBZ3_ARTAN (F-box domain, cyclin-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QBZ3_ARTAN)

HSP 1 Score: 402 bits (1032), Expect = 3.920e-128
Identity = 205/430 (47.67%), Postives = 280/430 (65.12%), Query Frame = 1
Query:    4 KQIDRGHPYGVEPLGNIFLRRS-SDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRP 1284
            K   + + YGV+PLGN +   S  + R  GLG +  L DE +LD++ ++  + LG L+ VS++ YV+ + + LWK LV+++      +G + +G WK+T  Y+   +   + D   +     KV  F+SD LFQ + CA   ++ EW+SR+ V RR GIS  +F R +EEPN+PV+L     +WPA+EKW R  L+    D R   G +++ L +Y  Y+++ ++E PLY+FD KF +K P LG+DY+VP+ F EDL SVLGDE RPD+RW+I GPA SGSSFH+DPN TSAWNA V G KKW+LFPP   PPGVHPS DG ++A PVS+ EWF+NFYE      +K  P+ECV  AGEV+FVP GWWH VINLE S+AITQNFVSR NL NV+ FL       L+SG     R++L ++F  A+ A  P
Sbjct:   45 KGTSKSNLYGVQPLGNFYFSSSPQNSRNTGLGNIQTLTDELVLDILAFLKGTHLGVLSAVSKSFYVFCNHEPLWKNLVLEKC-EENDEGFEFKGCWKST--YVA--SCKPEFDVAKAGGKGFKVKDFYSDYLFQSWLCANLEMKDEWLSRDNVVRRKGISVEEFVRDFEEPNKPVLLEGCLDNWPAMEKWDREYLVEVCGDERFAVGPVKMKLDEYFLYSDQVREERPLYLFDPKFANKVPILGKDYEVPEYFNEDLFSVLGDE-RPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVVKGSKKWVLFPPDVVPPGVHPSSDGAEVACPVSITEWFMNFYESTKTWKKK--PVECVCKAGEVIFVPQGWWHLVINLEDSIAITQNFVSRRNLLNVLDFLKRPNASTLVSGTR--DRVNLHDKFKKAIEASFP 464          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A2K1XBR1_POPTR (Uncharacterized protein n=9 Tax=Saliceae TaxID=238069 RepID=A0A2K1XBR1_POPTR)

HSP 1 Score: 401 bits (1031), Expect = 5.530e-128
Identity = 204/422 (48.34%), Postives = 286/422 (67.77%), Query Frame = 1
Query:   28 YGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLLTKK--HLISGLPPDQRLDLGERFVSALTAKRP 1284
            YGV+PLGN++  R S + R  GLG L IL DE +LD++G++D + LG LA VS++ YV+ + + LW+ LV+ ++    G+ +   G WK+T  YI G     D    V+    LKV  F+SD LFQ + CA+  ++PEW+ R+ + R+ GIS  +F   +EEPN+PV+L     +W AL+KW +  L++   D++  AG +E+ L++Y RY+++ ++E PLY+FD KF +K P LG +Y+VP  F EDL SVLG+E RPD+RW+I GPA SGSSFH+DPN TSAWNA + G KKWILFPP   PPGV+PS DG ++A PVS+MEWF+NFY    +  R+  P+EC+  AGEV+FVP GWWH VINLE S+AITQN+VSR NL NV+ FL       L+SG     R++L ++F +A+ +  P
Sbjct:   59 YGVQPLGNLYFNRGSINSRNTGLGNLQILTDELVLDILGFLDGTQLGVLATVSKSFYVFTNHEPLWRNLVLDKL---NGEFL-FNGSWKST--YIAGIYPLFD----VNGCSSLKVRDFYSDYLFQSWLCASLEMKPEWLERDNIVRKKGISVEEFVMNFEEPNKPVLLERCIDNWAALQKWDKDYLVSVCGDVKFAAGPVEMRLQEYFRYSDQVREERPLYLFDPKFAEKIPVLGSEYEVPLYFREDLFSVLGNE-RPDYRWVIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWILFPPDVVPPGVYPSPDGAEVACPVSIMEWFMNFYGATRNLKRR--PIECICKAGEVIFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKRPNAGELVSGTR--DRVNLHDKFENAIESTFP 465          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A1U7ZIR8_NELNU (F-box protein At5g06550 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZIR8_NELNU)

HSP 1 Score: 402 bits (1032), Expect = 5.570e-128
Identity = 205/424 (48.35%), Postives = 275/424 (64.86%), Query Frame = 1
Query:   22 HPYGVEPLGNIFLRRSS-DCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRP 1284
            H +GV+PLGN FL  S  + R  GLG L IL DE +LD++G++D + LG LA VSR+ Y++ + + LW+ LV++        G    G WK+T        S+A     ++    LKV  F+SD LFQ + CA   ++PEW+ R+ ++RR GIS  +F   +EEPN+PV+L    ++W A++KW R  L+   +D     G + + L+DY RYA+ +K+E PLY+FD KF +K P LG DY+VP  F EDL SVLG E RPD++W+I GP  SGSSFH+DPN TSAWNA V G KKWILFPP   PPGVHPS DG ++A PVS++EWF+NFY    +  ++  P+ECV   GEV+FVP GWWH VINLE S+AITQN+VSR NL NV+ FL       L+SG     R+ L ++F SA+ A  P
Sbjct:   65 HSHGVQPLGNFFLSTSPCNSRNTGLGNLRILTDELVLDILGFLDGTHLGVLATVSRSFYIFCNHEPLWRNLVLENF----KGGFSFNGSWKSTYVSAHRPLSSA----LINCSSGLKVRDFYSDYLFQSWLCANLEMKPEWLERDNIERRRGISVEEFILNFEEPNKPVLLEGCLENWAAMKKWGRDYLIRVSKDFEFSVGPVNMKLEDYFRYADGAKEERPLYLFDPKFAEKVPELGSDYEVPVYFREDLFSVLGSE-RPDYKWIIIGPVGSGSSFHIDPNSTSAWNAIVKGSKKWILFPPDVVPPGVHPSPDGAEVACPVSIIEWFMNFYGATKNWKKR--PVECVCKVGEVIFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKKPNANDLVSGTR--DRVTLYDKFRSAIEASFP 475          
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Match: A0A0A9PI86_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9PI86_ARUDO)

HSP 1 Score: 401 bits (1031), Expect = 7.840e-128
Identity = 205/428 (47.90%), Postives = 277/428 (64.72%), Query Frame = 1
Query:   34 VEPLGNIFLRRS--SDCRPGGLGKLAILDDERMLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQTRGGWKTTLRYILGGTSAADG-----DPRVSNHVPLKVSGFFSDLLFQPYHCATAALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWTRSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCPALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTSAWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEECHDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLPNVIRFLL--TKKHLISGLPPDQRLDLGERFVSALTAKRPDL 1290
            V+PLGN+ L  S  ++ R  GLG L +L D+ +LD++G +    L  ++  S+A YV A  D +W+ALV+ E+    G G    G W+ T  YI    +AA G      PR+     L++ GF+SD LFQ + CA   +R EW++R+ ++RR G+S   F   +EEPN PV+L    ++WPAL+KW+R  LL          G + + L  Y RYA+  ++E PLY+FD KF +K P +G+DY+VP  F EDL SVLG E+RPDHRW+I GPA SGSSFHVDPN TSAWNA + G KKW++FPP   PPGVHPS DG D+ +PVS+MEWF+NFY  C    ++  P+EC+  AGEVVFVP GWWH VINLE S+AITQN+VSR NL NV+ FL     + L+SG   D R++L ++F +A+ A  P +
Sbjct:   69 VQPLGNLLLSSSPRANLRDAGLGALRVLSDDLLLDVLGLLPARDLAGISAASKALYVVASHDQIWRALVLDEL----GGGFDFAGSWRAT--YI----AAASGRRGHLSPRI-----LEIKGFYSDYLFQSWLCANMEMRHEWLARDNIERRRGMSVEQFVAEFEEPNWPVLLEGCIENWPALQKWSREYLLDVSAGKEFAVGPVSMTLDRYFRYADNVQEERPLYLFDAKFAEKVPEMGRDYEVPLYFREDLFSVLG-EERPDHRWVIIGPAGSGSSFHVDPNSTSAWNAIIKGAKKWVMFPPEVVPPGVHPSADGADVTSPVSIMEWFMNFYSACKTWEKR--PIECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNLLNVLDFLKKPNARELVSGT--DDRVNLHDKFRAAIDAAHPGM 476          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A250XF21_9CHLO9.430e-12945.57Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A2G2VVE0_CAPBA1.090e-12847.63JmjC domain-containing protein n=5 Tax=Capsicum Ta... [more]
A0A7J7NS40_9MAGN1.200e-12847.22JmjC domain-containing protein n=1 Tax=Kingdonia u... [more]
A0A484KAP0_9ASTE1.330e-12849.53JmjC domain-containing protein n=3 Tax=Cuscuta sec... [more]
A0A103XH09_CYNCS1.360e-12849.05F-box domain, cyclin-like protein n=1 Tax=Cynara c... [more]
W2QKN7_PHYPN1.620e-12843.96JmjC domain-containing protein n=12 Tax=Phytophtho... [more]
A0A2U1QBZ3_ARTAN3.920e-12847.67F-box domain, cyclin-like protein n=1 Tax=Artemisi... [more]
A0A2K1XBR1_POPTR5.530e-12848.34Uncharacterized protein n=9 Tax=Saliceae TaxID=238... [more]
A0A1U7ZIR8_NELNU5.570e-12848.35F-box protein At5g06550 n=1 Tax=Nelumbo nucifera T... [more]
A0A0A9PI86_ARUDO7.840e-12847.90Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig99contigF-serratus_M_contig99:851473..858222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score676.8
Seed ortholog evalue7.5e-192
Seed eggNOG ortholog2880.D8LEI9
KEGG koko:K11323
Hectar predicted targeting categoryother localisation
GOsGO:0000976,GO:0000987,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006325,GO:0006464,GO:0006479,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008213,GO:0009987,GO:0010029,GO:0010030,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0018193,GO:0018195,GO:0018216,GO:0019538,GO:0032259,GO:0034969,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043565,GO:0043985,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048518,GO:0048580,GO:0048582,GO:0050789,GO:0050793,GO:0051094,GO:0051239,GO:0051240,GO:0051276,GO:0065007,GO:0071704,GO:0071840,GO:0097159,GO:1900140,GO:1901363,GO:1901564,GO:1990837,GO:2000026
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Ec32 ortholog descriptionJumonji and F-box domain protein
Ec32 orthologEc-21_004490.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons9
Model size2454
Cds size1446
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932785.356319-UTR-F-serratus_M_contig99:851472..8523571622932785.356319-UTR-F-serratus_M_contig99:851472..852357Fucus serratus maleUTRF-serratus_M_contig99 851473..852357 -
1690964474.366654-UTR-F-serratus_M_contig99:851472..8523571690964474.366654-UTR-F-serratus_M_contig99:851472..852357Fucus serratus maleUTRF-serratus_M_contig99 851473..852357 -
1622932785.5352454-UTR-F-serratus_M_contig99:857547..8575561622932785.5352454-UTR-F-serratus_M_contig99:857547..857556Fucus serratus maleUTRF-serratus_M_contig99 857548..857556 -
1690964474.476423-UTR-F-serratus_M_contig99:857547..8575561690964474.476423-UTR-F-serratus_M_contig99:857547..857556Fucus serratus maleUTRF-serratus_M_contig99 857548..857556 -
1622932785.5574353-UTR-F-serratus_M_contig99:858108..8582221622932785.5574353-UTR-F-serratus_M_contig99:858108..858222Fucus serratus maleUTRF-serratus_M_contig99 858109..858222 -
1690964474.493503-UTR-F-serratus_M_contig99:858108..8582221690964474.493503-UTR-F-serratus_M_contig99:858108..858222Fucus serratus maleUTRF-serratus_M_contig99 858109..858222 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932785.3799372-CDS-F-serratus_M_contig99:852357..8527421622932785.3799372-CDS-F-serratus_M_contig99:852357..852742Fucus serratus maleCDSF-serratus_M_contig99 852358..852742 -
1690964474.3807971-CDS-F-serratus_M_contig99:852357..8527421690964474.3807971-CDS-F-serratus_M_contig99:852357..852742Fucus serratus maleCDSF-serratus_M_contig99 852358..852742 -
1622932785.3969917-CDS-F-serratus_M_contig99:853109..8532761622932785.3969917-CDS-F-serratus_M_contig99:853109..853276Fucus serratus maleCDSF-serratus_M_contig99 853110..853276 -
1690964474.3915884-CDS-F-serratus_M_contig99:853109..8532761690964474.3915884-CDS-F-serratus_M_contig99:853109..853276Fucus serratus maleCDSF-serratus_M_contig99 853110..853276 -
1622932785.4157157-CDS-F-serratus_M_contig99:853781..8540361622932785.4157157-CDS-F-serratus_M_contig99:853781..854036Fucus serratus maleCDSF-serratus_M_contig99 853782..854036 -
1690964474.400303-CDS-F-serratus_M_contig99:853781..8540361690964474.400303-CDS-F-serratus_M_contig99:853781..854036Fucus serratus maleCDSF-serratus_M_contig99 853782..854036 -
1622932785.4350197-CDS-F-serratus_M_contig99:854825..8549451622932785.4350197-CDS-F-serratus_M_contig99:854825..854945Fucus serratus maleCDSF-serratus_M_contig99 854826..854945 -
1690964474.4102561-CDS-F-serratus_M_contig99:854825..8549451690964474.4102561-CDS-F-serratus_M_contig99:854825..854945Fucus serratus maleCDSF-serratus_M_contig99 854826..854945 -
1622932785.4582736-CDS-F-serratus_M_contig99:855197..8552911622932785.4582736-CDS-F-serratus_M_contig99:855197..855291Fucus serratus maleCDSF-serratus_M_contig99 855198..855291 -
1690964474.4231098-CDS-F-serratus_M_contig99:855197..8552911690964474.4231098-CDS-F-serratus_M_contig99:855197..855291Fucus serratus maleCDSF-serratus_M_contig99 855198..855291 -
1622932785.477339-CDS-F-serratus_M_contig99:855766..8559451622932785.477339-CDS-F-serratus_M_contig99:855766..855945Fucus serratus maleCDSF-serratus_M_contig99 855767..855945 -
1690964474.4338226-CDS-F-serratus_M_contig99:855766..8559451690964474.4338226-CDS-F-serratus_M_contig99:855766..855945Fucus serratus maleCDSF-serratus_M_contig99 855767..855945 -
1622932785.492105-CDS-F-serratus_M_contig99:856648..8567771622932785.492105-CDS-F-serratus_M_contig99:856648..856777Fucus serratus maleCDSF-serratus_M_contig99 856649..856777 -
1690964474.4530032-CDS-F-serratus_M_contig99:856648..8567771690964474.4530032-CDS-F-serratus_M_contig99:856648..856777Fucus serratus maleCDSF-serratus_M_contig99 856649..856777 -
1622932785.51263-CDS-F-serratus_M_contig99:857430..8575471622932785.51263-CDS-F-serratus_M_contig99:857430..857547Fucus serratus maleCDSF-serratus_M_contig99 857431..857547 -
1690964474.465856-CDS-F-serratus_M_contig99:857430..8575471690964474.465856-CDS-F-serratus_M_contig99:857430..857547Fucus serratus maleCDSF-serratus_M_contig99 857431..857547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig99.21203.1prot_F-serratus_M_contig99.21203.1Fucus serratus malepolypeptideF-serratus_M_contig99 852358..857547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig99.21203.1

>prot_F-serratus_M_contig99.21203.1 ID=prot_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=polypeptide|length=482bp
MLDLMGYMDLSSLGRLAVVSRATYVYAHVDDLWKALVVQEMWRRPGQGVQ
TRGGWKTTLRYILGGTSAADGDPRVSNHVPLKVSGFFSDLLFQPYHCATA
ALRPEWISRNTVDRRVGISPSDFRRLYEEPNRPVVLTDAAKSWPALEKWT
RSKLLAEHRDLRLHAGGLEIALKDYLRYAEESKDELPLYVFDKKFVDKCP
ALGQDYDVPDVFPEDLLSVLGDEQRPDHRWLIAGPARSGSSFHVDPNCTS
AWNATVSGKKKWILFPPGETPPGVHPSEDGLDLAAPVSLMEWFLNFYEEC
HDPGRKVCPLECVVSAGEVVFVPMGWWHCVINLEWSVAITQNFVSRVNLP
NVIRFLLTKKHLISGLPPDQRLDLGERFVSALTAKRPDLGAEEMARRALL
VAVDGRNQSNRRGLKNTAVHRREDDVNKKPRLWAKLKQGAAAVEPSTDDG
SNGEGRAAGGERSKTGVEGSGSNDFSFGFSF*
back to top

mRNA from alignment at F-serratus_M_contig99:851473..858222-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig99.21203.1 ID=mRNA_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=mRNA|length=6750bp|location=Sequence derived from alignment at F-serratus_M_contig99:851473..858222- (Fucus serratus male)
TCGAAACAGATCGATCGTGGCCACCCTTACGGTGTGGAGCCGCTGGGCAA CATCTTCTTGAGGCGGAGTTCCGACTGCCGACCCGGGGGCCTAGGGAAGC TTGCGATCCTGGACGTGAGCGAAGCCTGGTTTTTATTTTCTTTCGTTCCA ACAGTAGTGTACGTTTTACGGAGCACGTTAAAGCTCTTATGCAAGAAGGA GTGCGTCTTCTTGTGGCGAGGGAGGGCGGTTTTGTGAGTGTCTTACCGTT GTGCTACCTATCTTAAAACGATATTTTCTTGGGAAGCATCGAGCCTCTCA GGTGTGTGTCATATTTTATTATACTGCAGATTTATACTGCTGATCCGCCC TACGTTAACGATTCATGAGCGGACGAACATACTTCTTTCCGGAGACTGGT ACGGCGGCCATACTCTTGCCGGCGCCTAGATCCGCTCTCTCATGCGATGC TGCGGGCGATGTGTAATTCGTATCGATCAGAAAGTACGCGTGGCAGATAT ACTTACAGTTGAAGAGGGAAATTATAAGGTAGTTCTACTCCAAAGTACTG TATAGTACCATACTGTGTAGTGTACATATACATACAGTGTGTGGTACTTT TCCAGAAACGTTTTGGTAACCATTTATCTGTCTTGTATCGCCGTTCGCTT CACCACCACTTGGTAGGATGAGAGAATGCTAGACTTGATGGGGTATATGG ACTTGTCATCCCTCGGCCGCCTGGCGGTCGTGAGCCGCGCTACGTACGTG TACGCTCACGTGGACGACCTGTGGAAAGCTCTCGTGGTGCAGGTAAAACG CACGAGACGGTGCCGTACTGTGCTCTACTCCGACCCCCCCGCCTAGCTTG ATTGCTGAGCTTAGTTCAATAACAAAGTATTCGGCATGAAGAAGATCTTC TGCAAGGAAAATATATTTAGTCTAAATATATAACAACATATCTATTGTCT CGTAATCAGTAGAAAGTTATCGTGGAGATCTCTCGCTTGAACGCTCCTAA TATTTTCTGGGCGGGGTATCGTTGTTATGCTACTCTCTATTGATAGCGAA ATAGTATGGAAACATAATCCACTTTTCTAGCAATAGACTTCAAATCGCAG CCTGACCCTTTTTTCTGTGACGCCTCCTTGAAAGGTTTTTGTAGGTATTT GTATCAGTTTTATCTTGATCCTTTTATGATTGAAATCAAAATAATTTTTC CGCTCCGGTCACATCATCAAACTACTCGTGGCTGCTGAGAGAATTGATGG CAAGTCTTGATCCCCTCTTCGAAACCCTATCATAGATGCCGAAAATCCAT GAGACCGAATCTTTAGGTCTTGCATGTACAAAAAGCTACAAAATACAACA ATGAAACAGAGGAGATTTGTTTTAACGGCGAGACATTTGGTGGAGTGAGA CTGAACGTCCCACGCGTCTTGGGTTGTTTTCGACGGCTTCGTTAGGAGAT GTGGCGACGGCCGGGACAGGGGGTGCAGACGCGTGGAGGCTGGAAAACCA CCCTGCGGTACATCTTGGGAGGCACCTCTGCTGCGGACGGTGACCCCCGC GTTTCGAATCACGTACCCTTGAAGGTATGGCAAGAGTATACAGTTCACAA GAGTAGTGATTTTCAAACCACACGAGGGTCCGTTGTATTTGTGGAAAAGC TCACACATGACGAGGCATGCCTGGAACATCAAGAGGTTTTGTATTTGCAG CCTATGATCCCACCGAAACGTTTTGACATTTTCCCCCCCTGACTGGGGTA TAGTATAGTATAGTATGCTTAGAAGGTCTAAATGCGTTCAGATTTTTCTT TGAAGACACATCCGAAAGTACTACACTACTCGTGTATTGGTTAATATTTA ATGTATTGTAGCGCTGGAAAAGCTCTACAAGTACTGCGCATTGGCCGCTT TGCAAAAAACGCTCGAAACTCACTCTTCCGAATGGCGCGGTTGCTTGCGG TGATATGGTGGTATTTAGGTTTTATTCGTGTGTCATGGCTATCCACCAGC ACGAGTCCTTGCTAAACTCAGCAAGTGATGATGGGTGTGATTAAAATTAT TACCGGTACAGTAATATTTCCTCCTCTCTCCCCCCCCTCCGCCCAACGAA ATATGGAACATGAACTGCACACACAACTCTAGAGCTTCTATATACGTAGA CGTGCATGGATGAGGCAATGCATATGAACAAATGCTCCGTCATCCACCAT GCACCACCCGCACACATAACCACAACGTTAAGTTTCTGTTCTGGACTAAA TTACACAGGCGACACCTTCCCCGCCAGGTGTCGGGATTTTTTTCGGATCT TCTGTTCCAGCCGTACCATTGCGCCACCGCTGCCTTGAGACCCGAGTGGA TCAGCCGTAACACGGTGGACAGGAGGGTAGGGATTTCTCCCTCGGACTTC CGACGGCTCTACGAGGAGCCCAACAGACCCGTAGTCCTCACAGACGCCGC AAAAAGGTACAAGTACTGCAATCAATTCGCAATGATAATGTACTGTGTAC ATAATTTTCTACTGTACATTTCTATACGAACACGACCCTGTAGTACGCAG ATCACGTCCTTGGTCGATGTGTGCGTGAAGTATGCTTGTCGTGGGCAGGC CTGGCTTGAACATGTTTTCAGAAAGAGCATCTCGCCGCCGCTCGGAAACC CTCCGTAGACCGCTGTTCCGCCGAGATTTCGGGAAAGAAAACAACTATTT ATAGAACAAGCCTGGTGTCCTCTTTTTTCGTCTTGAGGAAGGGTTACTCA CGTGAATAAAACGTGTGGAATCCTTGCGCATGGATTTGCGCTTGCTTACT CCTCTAAAACCCGACCCCCCGTCTCGGAATCATAGCCGCGTGATGCACCT TGCGTGTTACAACATTCATAGTCATCCGCGGAACGTCTGTTAACACCTGT TCGTCGTTTTACCTCGTCGGCGCTCTCGCAGCTGGCCTGCCCTTGAAAAG TGGACCCGAAGCAAGCTTCTGGCAGAGCACAGGGATCTCCGCCTGCATGC CGGAGGCCTAGAGATCGCGCTGAAGGTGCTGTATAACCAACTGGCCTGTC ATATACCAATGCTCGCAACGGTGCGCCAGTTGTTTGCCCGGCAGACTAAA AAAAGAAACACACAACTCGTCGTTTCATTTATTCGTTCTTTCTGCCGACT ACATCTCTGCCGACAGCAAGATCGTAAGGAACGATGCTGCTGCTGCTGCT GCACCCGCTGTGCAGTGATTCGAGAACGGTTCCCCCTTGCCCCCCCCCCC CCGCTCCCCCTTGTAATTCATCGGCAGGACTATCTCCGCTACGCCGAGGA GTCGAAGGACGAGCTACCGCTTTACGTGTTCGACAAGAAATTTGTCGACA AGTGCCCCGCCCTCGGCCAAGACTATGACGTCCCAGACGTCTTCCCGGTG AGCCGTTCTTTCTGTATTGGGTGTAATAGCGCTCACTTGCTCTACTGTGT GTGTGTGTCATGAAGCAGAGCGTGTCCGTTTATTGACCTCGTGGTCATCG TCTGCGTGTCGTGTGGGTGTCAGGACGATCGCTTAGGCTGGATAGTTAAG CCGTATCATCTCGTTTCTCTTCCCTCCTAACTTTAAAAGCCCTTTTTGCG TGGTTATTATCACGCGACCAGCTCAGGAGGCAACGGGCGGACATACAACC TTCGCCGGTCGTGTTGTTCGGCAAAGCATTTTTATCGGAACTTAGCGGTC TCTCAGTCACAGGAGAAAGAAAAAGAAGAAACAAATGTTTTCTGCGTTAT TCTTCATGAAAAGGCCACATTATTCCGCATCGTCCACACGGTAGCGACGC CTCGCCGACGGCTGCGTAATTGTGTTTCGAAAGAGCGATCGAACGTGTTT TACCCTTGCTTGCATCGACTTGAGCCGGCATCGTTCAAGTGTCGCAATTG CCTCCAGTGCCACGCTCCCTGTAAGCTCTTTTTACTCAAGACAGCCCAGT GCTGTACGGAAGCTCCTGTGTGTCTTCACATAACACAGAAGACGATTTAT GCCGCTCTTTCCCTCGAAAATTGCCCCTCCCCGTCCTTATCCGTGGCGTC ATACACCTTTACACCTCGCCATCTGGTTTGGGTTGACAGTTTGGATGAGT ACTGAGTAGGGTTTACGGAACATACGGTAATAGATGTTGCGATAGGGCCG TAACAACATCGCCTCCTCTTAAAACACGACTCTCAGGAGGACCTGCTTTC CGTGCTTGGTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTC CCGCTCGCTCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCC TGGAACGCAACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGG AGAAACGCCTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGG CTCCCGTGTCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGTATCTGAA CAAGATCGAGATTCGGTCCTGACGCGTTGATATGTACTTGTTGTATCACT TAGGCTGCCAAGTATCGGTATTCTGTTTTGTGCCGCGATGCCATGTTGGT TGTGTTTGGTGCAACCAGCAGTAGCATGCCGGGTTCCTTTTTTCCCCCAG AGAGAGGTAAAGTTGGGGGTAGGGCTGAGCAGGGGTAGCATAGCGTTAAG ATACTCATATCCCGAACTATTTTCGTTCAATCTCCATGAAGCACTAAGTG CATGCATCGCCACGCTATAGCCCTAATATGAGCTCGTGCGCGAGGTACTT TTCCAGAGAGGTGCCGTTGACGGAGTCTAACCAAAAGCAGCACGTGACAT GATCATGATCAGGCCTTCTCTTACAGCAGAGGGGGAAAAGTGTAGCGTAT GCAACTTTGAACCACCACTCTTTTCACTTGTCGATTGACTCTTTTGTCGT CTCTTGCCACGGTGTGATCGTACCGTCGTACGGGGGATGGAGGCAGGAAT GTCATGACCCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTTGTCTCTGCC GGAGAGGTGGTGTTCGTGCCGATGGGATGGTGGCACTGCGTCATCAATCT TGAGTGGTCCGTGGCAATCACGCAGAATTTCGTCAGCAGGGTCAATCTCC CGAACGTCATCAGGTTCGTTCGGTGCTGTTCTCTACGTTCGTCGAGGGTG GGGGGAGCCTGTTCTCAGTCGGTTTTGCTAAGCTCTTCCCGCCCCCCCAA AATAAAAAGCACTAACACAACAAAGGACGCCGAATGACCAATTTTACCAC TAACCGGAACCGAGTCAACGTTTCTTCCTGCCACACACTCCATCATCGAC CTGGCCGGCGTCGACGCCTCCTCCTTGACGGCCTGGAGAAAGAACCTCAC CATTATTCAGGCTGCTACCTAAACATACTTTTTCCTTCAACCGGGGGGTA ATTAACCCTTTACCCCCCCCCTCCTCCCCCTGACCCGTTGCTGTCTGTCT CGCGCGTGTGACCATAACGGTGCGTTCCAGGTTTTTGCTTACTAAAAAAC ATCTCATATCCGGTCTGCCGCCCGACCAACGCTTAGATCTCGGAGAGAGA TTCGTTTCTGCTTTGACCGCCAAGCGTCCTGACCTCGGCGCCGAGGAGAT GGCGAGACGCGCTCTCCTGGTCGCCGTCGATGGGCGGAATCAGTCGAACC GTCGAGGTTTGAAAAACACGGCAGTTCACCGCCGAGAGGATGATGTGAAT AAAAAGCCGAGGCTGTGGGCGAAACTCAAGCAGGGAGCCGCGGCTGTCGA GCCCTCCACGGATGATGGCAGCAACGGCGAGGGCAGGGCTGCTGGTGGAG AGAGGAGCAAGACTGGGGTGGAGGGTTCAGGCAGCAATGATTTTAGTTTT GGGTTCTCGTTCTAATAACCATTCTAGCGTTCAAACTGTACGTGACGGCG GTGTACCAGGTAATATGACGACTCCCAGGGGATGGTTAATGGGTGTCCCC GGTCTAATTGTTTCGCTGTCCTGCGCAGACACTATTTGTAAACTTGACGG ATTTAACAACATTTGTGCAATTCAATGGGAAAAAACTAGCTTAGGGGATG TTTGCTGTCCTTGTGGTCGAACGAAAAAGGTTGGGGGGGGCACCCCGGAG TTATACATTTTATGCAATTTAATGCGTAACAGGATACTACTTTGAAGTAT TTAGTCAACCGCATCACCTAAGGCATAAGACGAAATGCCGAACAAACGTA TCTAGGTTGTATGTATGTATCTATGTGTGTATGGTCATCACTCATAGCAA GATTATGGATCAACCGGGTAAGGTTGCCAATCCTACTCGTAGATGATGTT TCCCTGTCCCCGTTCTTGCTGAGAATTTGGTCTCGCGAGACAGATTCAGC GGTCCCGTGTGCCCCTGACTTAACTGTTAAAACTTCGGTATTGTCATCGG TGCAAAAAACATCCGAACAGGACACCGGCTGTCGTGCTGTTTTGAACTTG GAGGAAATACAATACTTCTATTAATAGTCAAGCACGAGGAGTTGCGGGCA TTTCTAACGTGGAACTAACTCCCTCATTTCACACCGACGCGACTTTCTAC AGTTTTTAGTCGTTTGAAACACCACGGTCCCTCGCCTTTTCCGCCCCCAG CATGTGTCAAGTCGAAGGCACCTGATCGCAGAAGTGCAGTTGGCGAGACC TAGGAGATCTCAAGTTGGGGTTTACAGTATCACATGCTGCTTGCGAAAAA TTACCAGATATTTACTAAGGTTTTTCATAATCGAATTCCATTCGTACATA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig99:851473..858222-

>mRNA_F-serratus_M_contig99.21203.1 ID=mRNA_F-serratus_M_contig99.21203.1|Name=mRNA_F-serratus_M_contig99.21203.1|organism=Fucus serratus male|type=CDS|length=2892bp|location=Sequence derived from alignment at F-serratus_M_contig99:851473..858222- (Fucus serratus male)
ATGCTAGACTTGATGGGGTATATGGACTTGTCATCCCTCGGCCGCCTGGC
GGTCGTGAGCCGCGCTACGTACGTGTACGCTCACGTGGACGACCTGTGGA
AAGCTCTCGTGGTGCAGATGCTAGACTTGATGGGGTATATGGACTTGTCA
TCCCTCGGCCGCCTGGCGGTCGTGAGCCGCGCTACGTACGTGTACGCTCA
CGTGGACGACCTGTGGAAAGCTCTCGTGGTGCAGGAGATGTGGCGACGGC
CGGGACAGGGGGTGCAGACGCGTGGAGGCTGGAAAACCACCCTGCGGTAC
ATCTTGGGAGGCACCTCTGCTGCGGACGGTGACCCCCGCGTTTCGAATCA
CGTACCCTTGAAGGAGATGTGGCGACGGCCGGGACAGGGGGTGCAGACGC
GTGGAGGCTGGAAAACCACCCTGCGGTACATCTTGGGAGGCACCTCTGCT
GCGGACGGTGACCCCCGCGTTTCGAATCACGTACCCTTGAAGGTGTCGGG
ATTTTTTTCGGATCTTCTGTTCCAGCCGTACCATTGCGCCACCGCTGCCT
TGAGACCCGAGTGGATCAGCCGTAACACGGTGGACAGGAGGGTAGGGATT
TCTCCCTCGGACTTCCGACGGCTCTACGAGGAGCCCAACAGACCCGTAGT
CCTCACAGACGCCGCAAAAAGGTGTCGGGATTTTTTTCGGATCTTCTGTT
CCAGCCGTACCATTGCGCCACCGCTGCCTTGAGACCCGAGTGGATCAGCC
GTAACACGGTGGACAGGAGGGTAGGGATTTCTCCCTCGGACTTCCGACGG
CTCTACGAGGAGCCCAACAGACCCGTAGTCCTCACAGACGCCGCAAAAAG
CTGGCCTGCCCTTGAAAAGTGGACCCGAAGCAAGCTTCTGGCAGAGCACA
GGGATCTCCGCCTGCATGCCGGAGGCCTAGAGATCGCGCTGAAGCTGGCC
TGCCCTTGAAAAGTGGACCCGAAGCAAGCTTCTGGCAGAGCACAGGGATC
TCCGCCTGCATGCCGGAGGCCTAGAGATCGCGCTGAAGGACTATCTCCGC
TACGCCGAGGAGTCGAAGGACGAGCTACCGCTTTACGTGTTCGACAAGAA
ATTTGTCGACAAGTGCCCCGCCCTCGGCCAAGACTATGACGTCCCAGACG
TCTTCCCGGACTATCTCCGCTACGCCGAGGAGTCGAAGGACGAGCTACCG
CTTTACGTGTTCGACAAGAAATTTGTCGACAAGTGCCCCGCCCTCGGCCA
AGACTATGACGTCCCAGACGTCTTCCCGGAGGACCTGCTTTCCGTGCTTG
GTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTCCCGCTCGC
TCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCCTGGAACGC
AACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGGAGAAACGC
CTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGGCTCCCGTG
TCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGAGGACCTGCTTTCCGT
GCTTGGTGACGAGCAACGTCCGGATCACCGTTGGCTCATTGCGGGTCCCG
CTCGCTCGGGCTCATCGTTCCACGTCGACCCCAACTGTACGAGCGCCTGG
AACGCAACGGTCTCGGGCAAGAAAAAATGGATCTTGTTTCCCCCAGGAGA
AACGCCTCCGGGAGTTCACCCGAGTGAAGACGGGCTAGACCTGGCGGCTC
CCGTGTCCCTCATGGAGTGGTTCTTGAATTTCTACGAGGAATGTCATGAC
CCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTTGTCTCTGCCGGAGAGGT
GGTGTTCGTGCCGATGGGATGGTGGCACTGCGTCATCAATCTTGAGTGGT
CCGTGGCAATCACGCAGAATTTCGTCAGCAGGGTCAATCTCCCGAACGTC
ATCAGGAATGTCATGACCCCGGGCGGAAGGTGTGCCCGCTCGAGTGCGTT
GTCTCTGCCGGAGAGGTGGTGTTCGTGCCGATGGGATGGTGGCACTGCGT
CATCAATCTTGAGTGGTCCGTGGCAATCACGCAGAATTTCGTCAGCAGGG
TCAATCTCCCGAACGTCATCAGGTTTTTGCTTACTAAAAAACATCTCATA
TCCGGTCTGCCGCCCGACCAACGCTTAGATCTCGGAGAGAGATTCGTTTC
TGCTTTGACCGCCAAGCGTCCTGACCTCGGCGCCGAGGAGATGGCGAGAC
GCGCTCTCCTGGTCGCCGTCGATGGGCGGAATCAGTCGAACCGTCGAGGT
TTGAAAAACACGGCAGTTCACCGCCGAGAGGATGATGTGAATAAAAAGCC
GAGGCTGTGGGCGAAACTCAAGCAGGGAGCCGCGGCTGTCGAGCCCTCCA
CGGATGATGGCAGCAACGGCGAGGGCAGGGCTGCTGGTGGAGAGAGGAGC
AAGACTGGGGTGGAGGGTTCAGGCAGCAATGATTTTAGTTTTGGGTTCTC
GTTCTAAGTTTTTGCTTACTAAAAAACATCTCATATCCGGTCTGCCGCCC
GACCAACGCTTAGATCTCGGAGAGAGATTCGTTTCTGCTTTGACCGCCAA
GCGTCCTGACCTCGGCGCCGAGGAGATGGCGAGACGCGCTCTCCTGGTCG
CCGTCGATGGGCGGAATCAGTCGAACCGTCGAGGTTTGAAAAACACGGCA
GTTCACCGCCGAGAGGATGATGTGAATAAAAAGCCGAGGCTGTGGGCGAA
ACTCAAGCAGGGAGCCGCGGCTGTCGAGCCCTCCACGGATGATGGCAGCA
ACGGCGAGGGCAGGGCTGCTGGTGGAGAGAGGAGCAAGACTGGGGTGGAG
GGTTCAGGCAGCAATGATTTTAGTTTTGGGTTCTCGTTCTAA
back to top