mRNA_F-serratus_M_contig99.21201.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Match: A0A3M6VAF9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAF9_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.130e-24 Identity = 110/398 (27.64%), Postives = 176/398 (44.22%), Query Frame = 2 Query: 119 ESEMTDEGVEDAITPRQTYFMCFATDLLSAYEQIKKRGLTGAKAIDDLCVMIKTRVGLEETYAKGLEKTANQAFKDELEPGTFREALEGLRSDLVNKAVQHRQLAKNLTTDVLEPLSELRGQLSTKSKVLISRAYKLQRDTRALDEKYRRSHSKYQRCHREAAACLTAAVEGGAVPRIGSRHKHASSLSTQRIIATAFASSPPGGGTGSPEPKTLAAGKAVGGXXXXXXXXXXXXXXXXXXSQGVRRRTMSVTLEKVREAMPSGSNKKDLVQWFLPSEKNRKEALIESAQQGADAAEEARKACRACWIALRAGIHNAAKEFQKVVTDFQWCEEQLVSEAQDAMRKHVVFESSTLANQQYDLQ-------------MLFKVMESVNVEIDLRNFIRSAR 1273 ++++ D G D +T R + FATDLL + ++ +L ++++R+ LE TYA+ L K A+ + +E+ GT A+ LR+ +N +VQH QLAKNL DVL+P+ L S +S L + + D + ++ YR+ + + + R A+A A+ G + H LS +I T SP K V S G +V L+ + N LV W L SE +RKE + ++ + +AAE+AR+ C+ W L + Q V+ D+Q E +S +RKHV+F SSTLAN+Q M + E+V+V+ D+ +FI + R Sbjct: 7 QTQVADAGTSDNVTNRDPN-VAFATDLLFNLDDVRANCAASLAGHANLITLLQSRINLERTYAQELSKMAHFSHCNEMAHGTMETAMASLRAQYLNTSVQHEQLAKNLEEDVLKPIESLYQYNSKRSLRLTRQIKNAKEDVKIQEDAYRKVYRAFDKTFRVASASFANAMASGFSSTLIEDQYHRR-LSQIKI-------------TDSPAKKHSVIATVV----------------RPDKSSG------TVALKTI--------NNNKLVSWLLSSETHRKEDMAKNTVELMEAAEKARRICQHSWQTLETHRIKMYRVVQAVLADYQQMAEDRISTITTNLRKHVIFASSTLANEQVSSNSIDQAAYSCSNETMTAPMFETVDVKGDICDFIHATR 359
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Match: W4FBW5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBW5_9STRA) HSP 1 Score: 116 bits (291), Expect = 4.150e-23 Identity = 114/410 (27.80%), Postives = 177/410 (43.17%), Query Frame = 2 Query: 179 MCFATDLLSAYEQIKKRGLTGAKAIDDLCV-MIKTRVGLEETYAKGLEKTANQ-------------------------AFKDELEPG--------TFREALEGLRSDLVNKAVQHRQLAKNLTTDVLEPLSELRGQLSTKSKVLISRAYKLQRDTRALDEKYRRSHSKYQRCHREAAACLTAAVEGGAVPRIGSRHKHASSLST---QRIIATAFASSPPGGGTGSPEPKTLAAGKAVGGXXXXXXXXXXXXXXXXXXSQGVRRRTMSVTLEKVREAMPSGSNKKDL-----VQWFLPSEKNRKEALIESAQQGADAAEEARKACRACWIALRAGIHNAAKEFQKVVTDFQWCEEQLVSEAQDAMRKHVVFESSTLANQQYDLQMLFKVMESVNVEIDLRNFIRSARREV 1282 + F TDLL + ++K T A + C+ M+K R+ LE YA L + A+Q A D+ + G T +EAL GLR+ N +VQH+ LA NL DV +P+ L L K L ++++ T+A +E YR+ H K+ + ++A+ A++ G I AS + ++ + PP T S +P A AV T+S + ++ L V W LPS + +K+ L+ ++ + + AE +R CR W + Q ++ D+Q E +S ++RKHV+FESS LAN QYD QML VME+V+ E D+R FI + +R V Sbjct: 11 LSFPTDLLFNLDAVRKH-CTADLATHNACLSMLKGRMQLEHYYATELARLADQFKIDDEDDSNDPVGAELGAIDGKRGADDDDGDGGNDRTSRSSTLKEALRGLRAQYTNTSVQHKALAANLDEDVYQPMHTLYKYLVKKESKLTVCTTRVRKQTKAFEEHYRKQHIKFDKHFKDASTTYAQAMDVGIAREIIHNQYLASPVHLRPHEKHHPDKRTTPPP---THSLDP--AATSDAVSSPQHSPELITTIGTPAKPPPPSSPHITVSDGTGNTSRPRSTSMSRSTLDGTKLVSWLLPSGQQKKDNLLITSVKAIETAETSRHECRVAWNGFEDARVALFRSIQSILNDYQHMAEYSISNLTASLRKHVIFESSALANSQYDWQMLATVMEAVDAERDIRAFIVANQRMV 414
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Match: A0A329SZ50_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZ50_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.460e-19 Identity = 101/364 (27.75%), Postives = 146/364 (40.11%), Query Frame = 2 Query: 185 FATDLLSAYEQIKKRGLTGAKAIDDLCVMIKTRVGLEETYAKGLEKTANQAFKDELEPGTFREALEGLRSDLVNKAVQHRQLAKNLTTDVLEPLSELRGQLSTKSKVLISRAYKLQRDTRALDEKYRRSHSKYQRCHREAAACLTAAVEGGAVPRIGSRHKHASSLSTQRIIATAFASSPPGGGTGSPEPKTLAAGKAVGGXXXXXXXXXXXXXXXXXXSQGVRRRTMSVTLEKVREAMPSGSNKKDLVQWFLPS-EKNRKEALIESAQQGADAAEEARKACRACWIALRAGIHNAAKEFQKVVTDFQWCEEQLVSEAQDAMRKHVVFESSTLANQQYDLQMLFKVMESVNVEIDLRNFIRSAR 1273 FATDLL + ++ TG A +L M+K+R+ LE TYA+ L + A + D +E GT + A+ LRS +N +VQH+QLAKNL DVL+P+ L S +++ L R + G P A A+ T A+ S N+K LV W LPS + +RKE L + + AAE++R C+ W + + Q V+ D+Q E V +RKHVVF SS LAN+QYD Q + +E+V+V+ D+R+FI S R Sbjct: 25 FATDLLFNLDDVRAACATGLTAHGNLVTMLKSRINLERTYAQELSRMARYSHLDVMEHGTMKNAVASLRSQYLNTSVQHQQLAKNLEEDVLKPIESLYEYNSERAQNLTRRV----------------NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDSPAKTKASTAL---------------------------TTRTEKSSGTTALKSIHNRK-LVSWLLPSSDSHRKEELANNTVKLMAAAEKSRMKCQQTWQQVETNRIRMYRTVQAVLADYQQIAEDRVLTITTNLRKHVVFASSALANEQYDWQAVAPKLENVDVKSDIRDFIHSTR 344
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Match: A0A7S1UH41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH41_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 8.280e-17 Identity = 46/115 (40.00%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 293 EETYAKGLEKTANQAFKDELEPGTFREALEGLRSDLVNKAVQHRQLAKNLTTDVLEPLSELRGQLSTKSKVLISRAYKLQRDTRALDEKYRRSHSKYQRCHREAAACLTAAVEGG 637 EE++AK L++ + A P T +ALEG+RSD++N+AVQH + +NL DV+ PL++LR ++S K K + + A LQ+D + ++KYRR+H +++R REA + +A + G Sbjct: 4 EESFAKALQRVS--AHHMHCVPSTLGDALEGMRSDVINRAVQHGEFGQNLARDVVAPLADLRTKMSRKIKSIANAATSLQKDVKGAEDKYRRTHRQFERAMREAEEEINSATKAG 116
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Match: A0A7S3YL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YL22_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 4.180e-15 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 908 GSNKKDLVQWFLPSEKNRKEALIESAQQGADAAEEARKACRACWIALRAGIHNAAKEFQKVVTDFQWCEEQLVSEAQDAMRKHVVFESSTLANQQYDLQMLFKVMESVN 1234 G KKD W LPS++ ++E I++A+ AAE R C W + ++Q ++T FQ EE ++EA+D +RK +V E+S LANQQYD+QMLFKVM+++N Sbjct: 28 GITKKDYTGWLLPSKEQKQEEKIQAAKGLLSAAEALRLECIDLWEEYHRVENTEFHDYQCILTSFQKIEELYLAEARDGLRKQLVLEASALANQQYDVQMLFKVMDAIN 136 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig99.21201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig99.21201.1 >prot_F-serratus_M_contig99.21201.1 ID=prot_F-serratus_M_contig99.21201.1|Name=mRNA_F-serratus_M_contig99.21201.1|organism=Fucus serratus male|type=polypeptide|length=1402bp MESFGSVSMAYPLATIERVPSMAESSGAFSAATEAESEMTDEGVEDAITPback to top mRNA from alignment at F-serratus_M_contig99:821599..839798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig99.21201.1 ID=mRNA_F-serratus_M_contig99.21201.1|Name=mRNA_F-serratus_M_contig99.21201.1|organism=Fucus serratus male|type=mRNA|length=18200bp|location=Sequence derived from alignment at F-serratus_M_contig99:821599..839798- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig99:821599..839798- >mRNA_F-serratus_M_contig99.21201.1 ID=mRNA_F-serratus_M_contig99.21201.1|Name=mRNA_F-serratus_M_contig99.21201.1|organism=Fucus serratus male|type=CDS|length=8412bp|location=Sequence derived from alignment at F-serratus_M_contig99:821599..839798- (Fucus serratus male)back to top |